RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
TNFRSF1A-206ENST00000535038 PTPN5P54829 565 aa11.36□□□□□ -0.59
TNFRSF1A-206ENST00000535038 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
TNFRSF1A-206ENST00000535038 EPAS1Q99814 870 aa11.36□□□□□ -0.59
TNFRSF1A-206ENST00000535038 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-206ENST00000535038 COL9A1P20849 921 aa11.34□□□□□ -0.59
TNFRSF1A-206ENST00000535038 WNT2BQ93097 391 aa11.34□□□□□ -0.59
TNFRSF1A-206ENST00000535038 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
TNFRSF1A-206ENST00000535038 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
TNFRSF1A-206ENST00000535038 DDX12PQ92771 950 aa11.32□□□□□ -0.6
TNFRSF1A-206ENST00000535038 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
TNFRSF1A-206ENST00000535038 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
TNFRSF1A-206ENST00000535038 PDIA6Q15084 440 aa11.29□□□□□ -0.6
TNFRSF1A-206ENST00000535038 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-206ENST00000535038 E2F4Q16254 413 aa11.28□□□□□ -0.6
TNFRSF1A-206ENST00000535038 WDR70Q9NW82 654 aa11.28□□□□□ -0.6
TNFRSF1A-206ENST00000535038 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-206ENST00000535038 NBR1Q14596 966 aa11.26□□□□□ -0.61
TNFRSF1A-206ENST00000535038 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
TNFRSF1A-206ENST00000535038 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
TNFRSF1A-206ENST00000535038 ONECUT3O60422 494 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF1A-206ENST00000535038 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
TNFRSF1A-206ENST00000535038 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF1A-206ENST00000535038 TRIM6-TRIM34B2RNG4 842 aa11.22□□□□□ -0.61
TNFRSF1A-206ENST00000535038 MAP3K7O43318 606 aa11.22□□□□□ -0.61
TNFRSF1A-206ENST00000535038 ARIH1Q9Y4X5 557 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-206ENST00000535038 SEPT9Q9UHD8 586 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-206ENST00000535038 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-206ENST00000535038 ZFRQ96KR1 1074 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-206ENST00000535038 BCAMP50895 628 aa11.18□□□□□ -0.62
TNFRSF1A-206ENST00000535038 SOWAHBA6NEL2 793 aa11.17□□□□□ -0.62
TNFRSF1A-206ENST00000535038 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
TNFRSF1A-206ENST00000535038 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
TNFRSF1A-206ENST00000535038 FAM98CQ17RN3 349 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-206ENST00000535038 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
TNFRSF1A-206ENST00000535038 TSKSQ9UJT2 592 aa11.13□□□□□ -0.63
TNFRSF1A-206ENST00000535038 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-206ENST00000535038 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
TNFRSF1A-206ENST00000535038 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
TNFRSF1A-206ENST00000535038 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
TNFRSF1A-206ENST00000535038 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
TNFRSF1A-206ENST00000535038 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
TNFRSF1A-206ENST00000535038 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.1□□□□□ -0.63
TNFRSF1A-206ENST00000535038 PRSS12P56730 875 aa11.09□□□□□ -0.63
TNFRSF1A-206ENST00000535038 A0A0G2JS52 829 aa11.08□□□□□ -0.64
TNFRSF1A-206ENST00000535038 OSBPP22059 807 aa11.08□□□□□ -0.64
TNFRSF1A-206ENST00000535038 ITGBL1O95965 494 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-206ENST00000535038 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
TNFRSF1A-206ENST00000535038 TSR3Q9UJK0 312 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-206ENST00000535038 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
TNFRSF1A-206ENST00000535038 SMAPO00193 183 aa11.05□□□□□ -0.64
TNFRSF1A-206ENST00000535038 RGS20O76081 388 aa11.05□□□□□ -0.64
TNFRSF1A-206ENST00000535038 CDHR5Q9HBB8 845 aa11.05□□□□□ -0.64
TNFRSF1A-206ENST00000535038 NBPF26B4DH59 902 aa11.04□□□□□ -0.64
TNFRSF1A-206ENST00000535038 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
TNFRSF1A-206ENST00000535038 TATDN2Q93075 761 aa11.02□□□□□ -0.65
TNFRSF1A-206ENST00000535038 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
TNFRSF1A-206ENST00000535038 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-206ENST00000535038 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
TNFRSF1A-206ENST00000535038 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
TNFRSF1A-206ENST00000535038 C3orf80F5H4A9 247 aa10.99□□□□□ -0.65
TNFRSF1A-206ENST00000535038 PPP4CP60510 307 aa10.99□□□□□ -0.65
TNFRSF1A-206ENST00000535038 KCNC4Q03721 635 aa10.99□□□□□ -0.65
TNFRSF1A-206ENST00000535038 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
TNFRSF1A-206ENST00000535038 NUDT18Q6ZVK8 323 aa10.97□□□□□ -0.65
TNFRSF1A-206ENST00000535038 NPDC1Q9NQX5 325 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-206ENST00000535038 MLLT3P42568 568 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-206ENST00000535038 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-206ENST00000535038 PADI6Q6TGC4 694 aa10.94□□□□□ -0.66
TNFRSF1A-206ENST00000535038 RNF40O75150 1001 aa10.93□□□□□ -0.66
TNFRSF1A-206ENST00000535038 TTC13Q8NBP0 860 aa10.93□□□□□ -0.66
TNFRSF1A-206ENST00000535038 P3H3Q8IVL6 736 aa10.9□□□□□ -0.66
TNFRSF1A-206ENST00000535038 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-206ENST00000535038 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
TNFRSF1A-206ENST00000535038 SWT1Q5T5J6 900 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-206ENST00000535038 NECTIN2Q92692 538 aa10.86□□□□□ -0.67
TNFRSF1A-206ENST00000535038 SLF2Q8IX21 1173 aa10.85□□□□□ -0.67
TNFRSF1A-206ENST00000535038 MTRQ99707 1265 aa10.85□□□□□ -0.67
TNFRSF1A-206ENST00000535038 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
TNFRSF1A-206ENST00000535038 PTGDRQ13258 359 aa10.84□□□□□ -0.67
TNFRSF1A-206ENST00000535038 EYA1Q99502 592 aa10.84□□□□□ -0.67
TNFRSF1A-206ENST00000535038 IL21Q9HBE4 155 aa10.84□□□□□ -0.67
TNFRSF1A-206ENST00000535038 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
TNFRSF1A-206ENST00000535038 APLP1P51693 650 aa10.83□□□□□ -0.68
TNFRSF1A-206ENST00000535038 NUTM2FA1L443 756 aa10.82□□□□□ -0.68
TNFRSF1A-206ENST00000535038 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
TNFRSF1A-206ENST00000535038 SEMA3EO15041 775 aa10.79□□□□□ -0.68
TNFRSF1A-206ENST00000535038 DNAJB2P25686 324 aa10.78□□□□□ -0.68
TNFRSF1A-206ENST00000535038 RBM46Q8TBY0 533 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-206ENST00000535038 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
TNFRSF1A-206ENST00000535038 ADGRG1Q9Y653 693 aa10.77□□□□□ -0.69
TNFRSF1A-206ENST00000535038 FCHSD2O94868 740 aa10.75□□□□□ -0.69
TNFRSF1A-206ENST00000535038 COPS2P61201 443 aa10.75□□□□□ -0.69
TNFRSF1A-206ENST00000535038 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
TNFRSF1A-206ENST00000535038 PRR14Q9BWN1 585 aa10.75□□□□□ -0.69
TNFRSF1A-206ENST00000535038 FAM161AQ3B820 660 aa10.73□□□□□ -0.69
TNFRSF1A-206ENST00000535038 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
TNFRSF1A-206ENST00000535038 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
TNFRSF1A-206ENST00000535038 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
TNFRSF1A-206ENST00000535038 PRKD2Q9BZL6 878 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms