RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 CFTRP13569 1480 aa8.94□□□□□ -0.98
ECHDC1-223ENST00000534442 PPRC1Q5VV67 1664 aaKnown RBP8.94□□□□□ -0.98
ECHDC1-223ENST00000534442 KIF3CO14782 793 aa8.93□□□□□ -0.98
ECHDC1-223ENST00000534442 TOPBP1Q92547 1522 aa8.93□□□□□ -0.98
ECHDC1-223ENST00000534442 PDIA6Q15084 440 aa8.92□□□□□ -0.98
ECHDC1-223ENST00000534442 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
ECHDC1-223ENST00000534442 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
ECHDC1-223ENST00000534442 PLPP6Q8IY26 295 aa8.91□□□□□ -0.98
ECHDC1-223ENST00000534442 CEP170Q5SW79 1584 aa8.9□□□□□ -0.98
ECHDC1-223ENST00000534442 SPDYE16A6NNV3 312 aaPredicted RBP8.9□□□□□ -0.98
ECHDC1-223ENST00000534442 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
ECHDC1-223ENST00000534442 KIF21BO75037 1637 aa8.89□□□□□ -0.99
ECHDC1-223ENST00000534442 MAGI1Q96QZ7 1491 aaPredicted RBP8.89□□□□□ -0.99
ECHDC1-223ENST00000534442 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
ECHDC1-223ENST00000534442 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-223ENST00000534442 GABBR2O75899 941 aa8.87□□□□□ -0.99
ECHDC1-223ENST00000534442 PLCG2P16885 1265 aa8.87□□□□□ -0.99
ECHDC1-223ENST00000534442 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
ECHDC1-223ENST00000534442 GPIHBP1Q8IV16 184 aa8.87□□□□□ -0.99
ECHDC1-223ENST00000534442 ADAMTSL3P82987 1691 aa8.86□□□□□ -0.99
ECHDC1-223ENST00000534442 IQSEC2Q5JU85 1478 aa8.86□□□□□ -0.99
ECHDC1-223ENST00000534442 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-223ENST00000534442 MROH2BQ7Z745 1585 aa8.86□□□□□ -0.99
ECHDC1-223ENST00000534442 TDRD9Q8NDG6 1382 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-223ENST00000534442 LTBP4Q8N2S1 1624 aa8.85□□□□□ -0.99
ECHDC1-223ENST00000534442 G3V3G9 751 aa8.84□□□□□ -0.99
ECHDC1-223ENST00000534442 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-223ENST00000534442 POTEFA5A3E0 1075 aa8.82□□□□□ -1
ECHDC1-223ENST00000534442 UBAP1LF5GYI3 381 aa8.82□□□□□ -1
ECHDC1-223ENST00000534442 GPR37O15354 613 aa8.82□□□□□ -1
ECHDC1-223ENST00000534442 HSPA1LP34931 641 aa8.82□□□□□ -1
ECHDC1-223ENST00000534442 AK7Q96M32 723 aa8.82□□□□□ -1
ECHDC1-223ENST00000534442 ADCY10Q96PN6 1610 aa8.82□□□□□ -1
ECHDC1-223ENST00000534442 MAP3K9P80192 1104 aa8.81□□□□□ -1
ECHDC1-223ENST00000534442 OXER1Q8TDS5 423 aa8.81□□□□□ -1
ECHDC1-223ENST00000534442 UPF1Q92900 1129 aaKnown RBP eCLIP8.8□□□□□ -1
ECHDC1-223ENST00000534442 GRXCR2A6NFK2 248 aa8.79□□□□□ -1
ECHDC1-223ENST00000534442 SEC24BO95487 1268 aa8.79□□□□□ -1
ECHDC1-223ENST00000534442 KRI1Q8N9T8 703 aaKnown RBP8.79□□□□□ -1
ECHDC1-223ENST00000534442 MADDQ8WXG6 1647 aa8.79□□□□□ -1
ECHDC1-223ENST00000534442 PTPRTO14522 1441 aa8.79□□□□□ -1
ECHDC1-223ENST00000534442 SETD1AO15047 1707 aaKnown RBP8.78□□□□□ -1
ECHDC1-223ENST00000534442 DCBLD2Q96PD2 775 aa8.78□□□□□ -1
ECHDC1-223ENST00000534442 SHROOM2Q13796 1616 aa8.78□□□□□ -1
ECHDC1-223ENST00000534442 OSBPP22059 807 aa8.77□□□□□ -1.01
ECHDC1-223ENST00000534442 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-223ENST00000534442 RGS17Q9UGC6 210 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-223ENST00000534442 DNMBPQ6XZF7 1577 aa8.77□□□□□ -1.01
ECHDC1-223ENST00000534442 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1.01
ECHDC1-223ENST00000534442 TRIM66O15016 1216 aa8.76□□□□□ -1.01
ECHDC1-223ENST00000534442 PTGER2P43116 358 aa8.76□□□□□ -1.01
ECHDC1-223ENST00000534442 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
ECHDC1-223ENST00000534442 POLA1P09884 1462 aaPredicted RBP8.76□□□□□ -1.01
ECHDC1-223ENST00000534442 GRIN2BQ13224 1484 aa8.76□□□□□ -1.01
ECHDC1-223ENST00000534442 ABCC8Q09428 1581 aa8.75□□□□□ -1.01
ECHDC1-223ENST00000534442 YEATS2Q9ULM3 1422 aa8.75□□□□□ -1.01
ECHDC1-223ENST00000534442 C7P10643 843 aa8.75□□□□□ -1.01
ECHDC1-223ENST00000534442 GLI2P10070 1586 aa8.74□□□□□ -1.01
ECHDC1-223ENST00000534442 POTEIP0CG38 1075 aa8.74□□□□□ -1.01
ECHDC1-223ENST00000534442 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-223ENST00000534442 STRCQ7RTU9 1775 aa8.73□□□□□ -1.01
ECHDC1-223ENST00000534442 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
ECHDC1-223ENST00000534442 NUTM2FA1L443 756 aa8.73□□□□□ -1.01
ECHDC1-223ENST00000534442 DDX12PQ92771 950 aa8.73□□□□□ -1.01
ECHDC1-223ENST00000534442 PRDM2Q13029 1718 aa8.72□□□□□ -1.01
ECHDC1-223ENST00000534442 EVI5O60447 810 aa8.72□□□□□ -1.01
ECHDC1-223ENST00000534442 PDE4DQ08499 809 aa8.72□□□□□ -1.01
ECHDC1-223ENST00000534442 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
ECHDC1-223ENST00000534442 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
ECHDC1-223ENST00000534442 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
ECHDC1-223ENST00000534442 PTCD2Q8WV60 388 aaKnown RBP8.71□□□□□ -1.02
ECHDC1-223ENST00000534442 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
ECHDC1-223ENST00000534442 RIMS1Q86UR5 1692 aaKnown RBP8.71□□□□□ -1.02
ECHDC1-223ENST00000534442 PRG4Q92954 1404 aaPredicted RBP8.71□□□□□ -1.02
ECHDC1-223ENST00000534442 TBC1D12O60347 775 aa8.7□□□□□ -1.02
ECHDC1-223ENST00000534442 BCORL1Q5H9F3 1711 aa8.7□□□□□ -1.02
ECHDC1-223ENST00000534442 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-223ENST00000534442 MAP2K5Q13163 448 aa8.69□□□□□ -1.02
ECHDC1-223ENST00000534442 CFAP43Q8NDM7 1665 aa8.69□□□□□ -1.02
ECHDC1-223ENST00000534442 IRF6O14896 467 aa8.68□□□□□ -1.02
ECHDC1-223ENST00000534442 GNPATO15228 680 aa8.68□□□□□ -1.02
ECHDC1-223ENST00000534442 SLC34A2O95436 690 aa8.68□□□□□ -1.02
ECHDC1-223ENST00000534442 FECHP22830 423 aa8.68□□□□□ -1.02
ECHDC1-223ENST00000534442 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
ECHDC1-223ENST00000534442 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-223ENST00000534442 MAP3K4Q9Y6R4 1608 aa8.68□□□□□ -1.02
ECHDC1-223ENST00000534442 FCHSD2O94868 740 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 SOGA1O94964 1423 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 NUP160Q12769 1436 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 POTEHQ6S545 545 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 POTEAQ6S8J7 498 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 C3orf67Q6ZVT6 689 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
ECHDC1-223ENST00000534442 PIP4K2BP78356 416 aa8.66□□□□□ -1.02
ECHDC1-223ENST00000534442 HIC1Q14526 733 aa8.66□□□□□ -1.02
ECHDC1-223ENST00000534442 GRIN2AQ12879 1464 aa8.65□□□□□ -1.02
ECHDC1-223ENST00000534442 ASXL2Q76L83 1435 aa8.64□□□□□ -1.03
ECHDC1-223ENST00000534442 PTGDRQ13258 359 aa8.64□□□□□ -1.03
ECHDC1-223ENST00000534442 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms