RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
CLNS1A-212ENST00000533957 CFAP44Q96MT7 982 aa11□□□□□ -0.65
CLNS1A-212ENST00000533957 EPAS1Q99814 870 aa11□□□□□ -0.65
CLNS1A-212ENST00000533957 GOLGA8CPA6NN73 597 aa10.99□□□□□ -0.65
CLNS1A-212ENST00000533957 PTPN5P54829 565 aa10.99□□□□□ -0.65
CLNS1A-212ENST00000533957 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
CLNS1A-212ENST00000533957 C6orf132Q5T0Z8 1188 aa10.97□□□□□ -0.65
CLNS1A-212ENST00000533957 NBPF3Q9H094 633 aa10.97□□□□□ -0.65
CLNS1A-212ENST00000533957 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
CLNS1A-212ENST00000533957 DDX12PQ92771 950 aa10.96□□□□□ -0.65
CLNS1A-212ENST00000533957 WNT2BQ93097 391 aa10.96□□□□□ -0.65
CLNS1A-212ENST00000533957 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
CLNS1A-212ENST00000533957 CCDC180Q9P1Z9 1646 aa10.95□□□□□ -0.66
CLNS1A-212ENST00000533957 E2F4Q16254 413 aa10.93□□□□□ -0.66
CLNS1A-212ENST00000533957 RBM33Q96EV2 1170 aaKnown RBP10.93□□□□□ -0.66
CLNS1A-212ENST00000533957 SPDYE16A6NNV3 312 aaPredicted RBP10.92□□□□□ -0.66
CLNS1A-212ENST00000533957 PDIA6Q15084 440 aa10.92□□□□□ -0.66
CLNS1A-212ENST00000533957 WDR70Q9NW82 654 aa10.92□□□□□ -0.66
CLNS1A-212ENST00000533957 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
CLNS1A-212ENST00000533957 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
CLNS1A-212ENST00000533957 ARIH1Q9Y4X5 557 aaPredicted RBP10.9□□□□□ -0.66
CLNS1A-212ENST00000533957 LAPTM4BQ86VI4 370 aa10.88□□□□□ -0.67
CLNS1A-212ENST00000533957 NBR1Q14596 966 aa10.87□□□□□ -0.67
CLNS1A-212ENST00000533957 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
CLNS1A-212ENST00000533957 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
CLNS1A-212ENST00000533957 ANKK1Q8NFD2 765 aa10.85□□□□□ -0.67
CLNS1A-212ENST00000533957 MAP3K7O43318 606 aa10.84□□□□□ -0.67
CLNS1A-212ENST00000533957 TSR1Q2NL82 804 aaKnown RBP10.84□□□□□ -0.67
CLNS1A-212ENST00000533957 ZFRQ96KR1 1074 aaKnown RBP10.83□□□□□ -0.68
CLNS1A-212ENST00000533957 SEPT9Q9UHD8 586 aaPredicted RBP10.82□□□□□ -0.68
CLNS1A-212ENST00000533957 SOWAHBA6NEL2 793 aa10.81□□□□□ -0.68
CLNS1A-212ENST00000533957 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
CLNS1A-212ENST00000533957 IFFO2Q5TF58 517 aa10.81□□□□□ -0.68
CLNS1A-212ENST00000533957 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
CLNS1A-212ENST00000533957 BCAMP50895 628 aa10.8□□□□□ -0.68
CLNS1A-212ENST00000533957 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
CLNS1A-212ENST00000533957 PACS2Q86VP3 889 aa10.79□□□□□ -0.68
CLNS1A-212ENST00000533957 TSKSQ9UJT2 592 aa10.79□□□□□ -0.68
CLNS1A-212ENST00000533957 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
CLNS1A-212ENST00000533957 OSBPP22059 807 aa10.76□□□□□ -0.69
CLNS1A-212ENST00000533957 CDCA7LQ96GN5 454 aa10.76□□□□□ -0.69
CLNS1A-212ENST00000533957 PRSS12P56730 875 aa10.75□□□□□ -0.69
CLNS1A-212ENST00000533957 CERKQ8TCT0 537 aa10.75□□□□□ -0.69
CLNS1A-212ENST00000533957 WBP1LQ9NX94 342 aa10.75□□□□□ -0.69
CLNS1A-212ENST00000533957 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
CLNS1A-212ENST00000533957 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.73□□□□□ -0.69
CLNS1A-212ENST00000533957 FAM198AQ9UFP1 575 aa10.73□□□□□ -0.69
CLNS1A-212ENST00000533957 LRCH3Q96II8 777 aa10.71□□□□□ -0.69
CLNS1A-212ENST00000533957 A0A0G2JS52 829 aa10.7□□□□□ -0.7
CLNS1A-212ENST00000533957 ITGBL1O95965 494 aaPredicted RBP10.7□□□□□ -0.7
CLNS1A-212ENST00000533957 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
CLNS1A-212ENST00000533957 C3orf80F5H4A9 247 aa10.69□□□□□ -0.7
CLNS1A-212ENST00000533957 SMAPO00193 183 aa10.69□□□□□ -0.7
CLNS1A-212ENST00000533957 RGS20O76081 388 aa10.69□□□□□ -0.7
CLNS1A-212ENST00000533957 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
CLNS1A-212ENST00000533957 HPS5Q9UPZ3 1129 aa10.69□□□□□ -0.7
CLNS1A-212ENST00000533957 ARHGEF1Q92888 912 aaKnown RBP10.68□□□□□ -0.7
CLNS1A-212ENST00000533957 TATDN2Q93075 761 aa10.68□□□□□ -0.7
CLNS1A-212ENST00000533957 NPDC1Q9NQX5 325 aaPredicted RBP10.66□□□□□ -0.7
CLNS1A-212ENST00000533957 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
CLNS1A-212ENST00000533957 PPP4CP60510 307 aa10.65□□□□□ -0.7
CLNS1A-212ENST00000533957 SAMD7Q7Z3H4 446 aa10.65□□□□□ -0.7
CLNS1A-212ENST00000533957 NBPF26B4DH59 902 aa10.64□□□□□ -0.71
CLNS1A-212ENST00000533957 KCNC4Q03721 635 aa10.64□□□□□ -0.71
CLNS1A-212ENST00000533957 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
CLNS1A-212ENST00000533957 NUDT18Q6ZVK8 323 aa10.63□□□□□ -0.71
CLNS1A-212ENST00000533957 KCNV2Q8TDN2 545 aa10.63□□□□□ -0.71
CLNS1A-212ENST00000533957 MLLT3P42568 568 aaPredicted RBP10.62□□□□□ -0.71
CLNS1A-212ENST00000533957 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
CLNS1A-212ENST00000533957 HDGFP51858 240 aaKnown RBP10.6□□□□□ -0.71
CLNS1A-212ENST00000533957 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
CLNS1A-212ENST00000533957 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
CLNS1A-212ENST00000533957 EYA1Q99502 592 aa10.53□□□□□ -0.72
CLNS1A-212ENST00000533957 IRX2Q9BZI1 471 aaPredicted RBP10.52□□□□□ -0.73
CLNS1A-212ENST00000533957 RNF40O75150 1001 aa10.51□□□□□ -0.73
CLNS1A-212ENST00000533957 PTGDRQ13258 359 aa10.51□□□□□ -0.73
CLNS1A-212ENST00000533957 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
CLNS1A-212ENST00000533957 P3H3Q8IVL6 736 aa10.51□□□□□ -0.73
CLNS1A-212ENST00000533957 APLP1P51693 650 aa10.49□□□□□ -0.73
CLNS1A-212ENST00000533957 MTRQ99707 1265 aa10.49□□□□□ -0.73
CLNS1A-212ENST00000533957 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
CLNS1A-212ENST00000533957 SEMA3EO15041 775 aa10.48□□□□□ -0.73
CLNS1A-212ENST00000533957 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
CLNS1A-212ENST00000533957 IL21Q9HBE4 155 aa10.48□□□□□ -0.73
CLNS1A-212ENST00000533957 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
CLNS1A-212ENST00000533957 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
CLNS1A-212ENST00000533957 ZNF516Q92618 1163 aa10.46□□□□□ -0.73
CLNS1A-212ENST00000533957 ABCC9O60706 1549 aa10.46□□□□□ -0.74
CLNS1A-212ENST00000533957 ADGRG1Q9Y653 693 aa10.44□□□□□ -0.74
CLNS1A-212ENST00000533957 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
CLNS1A-212ENST00000533957 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
CLNS1A-212ENST00000533957 DNAJB2P25686 324 aa10.41□□□□□ -0.74
CLNS1A-212ENST00000533957 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
CLNS1A-212ENST00000533957 PPP1R18Q6NYC8 613 aa10.41□□□□□ -0.74
CLNS1A-212ENST00000533957 FCHSD2O94868 740 aa10.4□□□□□ -0.74
CLNS1A-212ENST00000533957 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
CLNS1A-212ENST00000533957 TMEM134Q9H6X4 195 aa10.39□□□□□ -0.75
CLNS1A-212ENST00000533957 TESPA1A2RU30 521 aaPredicted RBP10.38□□□□□ -0.75
CLNS1A-212ENST00000533957 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
CLNS1A-212ENST00000533957 COPS2P61201 443 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms