RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 FAM135AQ9P2D6 1515 aa21.6■■□□□ 1.05
ATP2C1-224ENST00000533801 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
ATP2C1-224ENST00000533801 ABCC2Q92887 1545 aa21.59■■□□□ 1.05
ATP2C1-224ENST00000533801 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.04
ATP2C1-224ENST00000533801 CROCC2H7BZ55 1655 aa21.57■■□□□ 1.04
ATP2C1-224ENST00000533801 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
ATP2C1-224ENST00000533801 SHANK2Q9UPX8 1470 aa21.57■■□□□ 1.04
ATP2C1-224ENST00000533801 SCAPERQ9BY12 1400 aa21.56■■□□□ 1.04
ATP2C1-224ENST00000533801 ARHGEF12Q9NZN5 1544 aa21.56■■□□□ 1.04
ATP2C1-224ENST00000533801 PANK3Q9H999 370 aa21.52■■□□□ 1.04
ATP2C1-224ENST00000533801 PLCH2O75038 1416 aa21.52■■□□□ 1.03
ATP2C1-224ENST00000533801 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
ATP2C1-224ENST00000533801 PREX2Q70Z35 1606 aa21.5■■□□□ 1.03
ATP2C1-224ENST00000533801 BCORL1Q5H9F3 1711 aa21.48■■□□□ 1.03
ATP2C1-224ENST00000533801 DHX29Q7Z478 1369 aaKnown RBP21.48■■□□□ 1.03
ATP2C1-224ENST00000533801 TMF1P82094 1093 aa21.47■■□□□ 1.03
ATP2C1-224ENST00000533801 ZBED9Q6R2W3 1325 aa21.46■■□□□ 1.03
ATP2C1-224ENST00000533801 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
ATP2C1-224ENST00000533801 RALGAPBQ86X10 1494 aa21.45■■□□□ 1.02
ATP2C1-224ENST00000533801 PLA2R1Q13018 1463 aa21.44■■□□□ 1.02
ATP2C1-224ENST00000533801 ZCCHC11Q5TAX3 1644 aaKnown RBP21.44■■□□□ 1.02
ATP2C1-224ENST00000533801 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
ATP2C1-224ENST00000533801 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
ATP2C1-224ENST00000533801 DISP3Q9P2K9 1392 aa21.43■■□□□ 1.02
ATP2C1-224ENST00000533801 MYO5CQ9NQX4 1742 aa21.43■■□□□ 1.02
ATP2C1-224ENST00000533801 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
ATP2C1-224ENST00000533801 KANK1Q14678 1352 aa21.42■■□□□ 1.02
ATP2C1-224ENST00000533801 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
ATP2C1-224ENST00000533801 PRAG1Q86YV5 1406 aa21.42■■□□□ 1.02
ATP2C1-224ENST00000533801 FANCAO15360 1455 aa21.42■■□□□ 1.02
ATP2C1-224ENST00000533801 A2MP01023 1474 aa21.41■■□□□ 1.02
ATP2C1-224ENST00000533801 KTN1Q86UP2 1357 aaKnown RBP21.41■■□□□ 1.02
ATP2C1-224ENST00000533801 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
ATP2C1-224ENST00000533801 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
ATP2C1-224ENST00000533801 MYBBP1AQ9BQG0 1328 aaKnown RBP21.4■■□□□ 1.02
ATP2C1-224ENST00000533801 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.02
ATP2C1-224ENST00000533801 KDM5CP41229 1560 aa21.38■■□□□ 1.01
ATP2C1-224ENST00000533801 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
ATP2C1-224ENST00000533801 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
ATP2C1-224ENST00000533801 UHRF1BP1Q6BDS2 1440 aa21.37■■□□□ 1.01
ATP2C1-224ENST00000533801 ASXL2Q76L83 1435 aa21.37■■□□□ 1.01
ATP2C1-224ENST00000533801 SHROOM2Q13796 1616 aa21.36■■□□□ 1.01
ATP2C1-224ENST00000533801 RALBP1Q15311 655 aa21.36■■□□□ 1.01
ATP2C1-224ENST00000533801 DUOX2Q9NRD8 1548 aa21.35■■□□□ 1.01
ATP2C1-224ENST00000533801 TESK2Q96S53 571 aa21.35■■□□□ 1.01
ATP2C1-224ENST00000533801 TRAK1Q9UPV9 953 aa21.35■■□□□ 1.01
ATP2C1-224ENST00000533801 WDR7Q9Y4E6 1490 aa21.35■■□□□ 1.01
ATP2C1-224ENST00000533801 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
ATP2C1-224ENST00000533801 NLRP13Q86W25 1043 aa21.34■■□□□ 1.01
ATP2C1-224ENST00000533801 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
ATP2C1-224ENST00000533801 TMEM132EQ6IEE7 984 aa21.33■■□□□ 1.01
ATP2C1-224ENST00000533801 CCDC136Q96JN2 1154 aa21.33■■□□□ 1.01
ATP2C1-224ENST00000533801 WASHC2CQ9Y4E1 1318 aa21.33■■□□□ 1.01
ATP2C1-224ENST00000533801 CFAP65Q6ZU64 1925 aaKnown RBP21.33■■□□□ 1.01
ATP2C1-224ENST00000533801 CDCA7LQ96GN5 454 aa21.33■■□□□ 1
ATP2C1-224ENST00000533801 ARID4BQ4LE39 1312 aaPredicted RBP21.32■■□□□ 1
ATP2C1-224ENST00000533801 ADGRF5Q8IZF2 1346 aa21.31■■□□□ 1
ATP2C1-224ENST00000533801 CLASP1Q7Z460 1538 aa21.3■■□□□ 1
ATP2C1-224ENST00000533801 ERBINQ96RT1 1412 aa21.3■■□□□ 1
ATP2C1-224ENST00000533801 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
ATP2C1-224ENST00000533801 MLECQ14165 292 aa21.29■■□□□ 1
ATP2C1-224ENST00000533801 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
ATP2C1-224ENST00000533801 ABCC1P33527 1531 aa21.28■■□□□ 1
ATP2C1-224ENST00000533801 CCDC146Q8IYE0 955 aa21.27■■□□□ 1
ATP2C1-224ENST00000533801 STK26Q9P289 416 aa21.27■■□□□ 1
ATP2C1-224ENST00000533801 PLIN1O60240 522 aa21.26■□□□□ 0.99
ATP2C1-224ENST00000533801 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
ATP2C1-224ENST00000533801 UGGT1Q9NYU2 1555 aa21.25■□□□□ 0.99
ATP2C1-224ENST00000533801 PER1O15534 1290 aaPredicted RBP21.24■□□□□ 0.99
ATP2C1-224ENST00000533801 CD109Q6YHK3 1445 aa21.24■□□□□ 0.99
ATP2C1-224ENST00000533801 MAST1Q9Y2H9 1570 aa21.22■□□□□ 0.99
ATP2C1-224ENST00000533801 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
ATP2C1-224ENST00000533801 ADAMTS8Q9UP79 889 aa21.22■□□□□ 0.99
ATP2C1-224ENST00000533801 UHRF1BP1LA0JNW5 1464 aa21.21■□□□□ 0.99
ATP2C1-224ENST00000533801 BRD4O60885 1362 aaPredicted RBP21.2■□□□□ 0.98
ATP2C1-224ENST00000533801 ERICH6Q7L0X2 663 aa21.2■□□□□ 0.98
ATP2C1-224ENST00000533801 STAG3Q9UJ98 1225 aa21.2■□□□□ 0.98
ATP2C1-224ENST00000533801 ATP7AQ04656 1500 aa21.19■□□□□ 0.98
ATP2C1-224ENST00000533801 ATP10AO60312 1499 aa21.18■□□□□ 0.98
ATP2C1-224ENST00000533801 RCAN3Q9UKA8 241 aa21.18■□□□□ 0.98
ATP2C1-224ENST00000533801 UNC13BO14795 1591 aa21.17■□□□□ 0.98
ATP2C1-224ENST00000533801 CDCA8Q53HL2 280 aa21.17■□□□□ 0.98
ATP2C1-224ENST00000533801 ZFYVE16Q7Z3T8 1539 aa21.16■□□□□ 0.98
ATP2C1-224ENST00000533801 PLXNC1O60486 1568 aa21.16■□□□□ 0.98
ATP2C1-224ENST00000533801 EXOC6Q8TAG9 804 aa21.16■□□□□ 0.98
ATP2C1-224ENST00000533801 IQGAP3Q86VI3 1631 aa21.15■□□□□ 0.98
ATP2C1-224ENST00000533801 PPP2R1AP30153 589 aa21.14■□□□□ 0.98
ATP2C1-224ENST00000533801 TRPM1Q7Z4N2 1603 aa21.14■□□□□ 0.97
ATP2C1-224ENST00000533801 FAM69CQ0P6D2 419 aa21.14■□□□□ 0.97
ATP2C1-224ENST00000533801 COL17A1Q9UMD9 1497 aaPredicted RBP21.12■□□□□ 0.97
ATP2C1-224ENST00000533801 SLC12A5Q9H2X9 1139 aa21.12■□□□□ 0.97
ATP2C1-224ENST00000533801 SMG6Q86US8 1419 aaKnown RBP21.11■□□□□ 0.97
ATP2C1-224ENST00000533801 GPRASP1Q5JY77 1395 aa21.11■□□□□ 0.97
ATP2C1-224ENST00000533801 RTEL1-TNFRSF6BF6WH68 1400 aa21.11■□□□□ 0.97
ATP2C1-224ENST00000533801 NPM2Q86SE8 214 aaKnown RBP21.11■□□□□ 0.97
ATP2C1-224ENST00000533801 PARD3Q8TEW0 1356 aa21.11■□□□□ 0.97
ATP2C1-224ENST00000533801 NOS1P29475 1434 aa21.11■□□□□ 0.97
ATP2C1-224ENST00000533801 E9PCH4 1651 aa21.09■□□□□ 0.97
ATP2C1-224ENST00000533801 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
ATP2C1-224ENST00000533801 EIF3AQ14152 1382 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms