RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 BBXQ8WY36 941 aaPredicted RBP9.1□□□□□ -0.95
BRCA2-205ENST00000533776 MFSD10Q14728 455 aa9.09□□□□□ -0.95
BRCA2-205ENST00000533776 ZNF454Q8N9F8 522 aa9.09□□□□□ -0.95
BRCA2-205ENST00000533776 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
BRCA2-205ENST00000533776 BCAMP50895 628 aa9.06□□□□□ -0.96
BRCA2-205ENST00000533776 PRKD2Q9BZL6 878 aa9.06□□□□□ -0.96
BRCA2-205ENST00000533776 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
BRCA2-205ENST00000533776 EVI5O60447 810 aa9.04□□□□□ -0.96
BRCA2-205ENST00000533776 FOSBP53539 338 aa9.04□□□□□ -0.96
BRCA2-205ENST00000533776 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
BRCA2-205ENST00000533776 MAP3K9P80192 1104 aa9.03□□□□□ -0.96
BRCA2-205ENST00000533776 EMILIN3Q9NT22 766 aa9.03□□□□□ -0.96
BRCA2-205ENST00000533776 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
BRCA2-205ENST00000533776 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.02□□□□□ -0.97
BRCA2-205ENST00000533776 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
BRCA2-205ENST00000533776 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
BRCA2-205ENST00000533776 RABGEF1Q9UJ41 708 aa9.01□□□□□ -0.97
BRCA2-205ENST00000533776 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
BRCA2-205ENST00000533776 ANO8Q9HCE9 1232 aaPredicted RBP8.99□□□□□ -0.97
BRCA2-205ENST00000533776 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
BRCA2-205ENST00000533776 JPH4Q96JJ6 628 aa8.98□□□□□ -0.97
BRCA2-205ENST00000533776 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
BRCA2-205ENST00000533776 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
BRCA2-205ENST00000533776 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
BRCA2-205ENST00000533776 ADAM33Q9BZ11 813 aa8.96□□□□□ -0.98
BRCA2-205ENST00000533776 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
BRCA2-205ENST00000533776 DPYSL4O14531 572 aa8.94□□□□□ -0.98
BRCA2-205ENST00000533776 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
BRCA2-205ENST00000533776 ZFRQ96KR1 1074 aaKnown RBP8.94□□□□□ -0.98
BRCA2-205ENST00000533776 POTECB2RU33 542 aa8.93□□□□□ -0.98
BRCA2-205ENST00000533776 PROX2Q3B8N5 592 aa8.92□□□□□ -0.98
BRCA2-205ENST00000533776 PCDHGA10Q9Y5H3 936 aa8.91□□□□□ -0.98
BRCA2-205ENST00000533776 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.98
BRCA2-205ENST00000533776 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
BRCA2-205ENST00000533776 STK17AQ9UEE5 414 aa8.89□□□□□ -0.99
BRCA2-205ENST00000533776 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
BRCA2-205ENST00000533776 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
BRCA2-205ENST00000533776 PHF14O94880 888 aa8.87□□□□□ -0.99
BRCA2-205ENST00000533776 TJAP1Q5JTD0 557 aa8.87□□□□□ -0.99
BRCA2-205ENST00000533776 MYT1Q01538 1121 aa8.85□□□□□ -0.99
BRCA2-205ENST00000533776 DDX12PQ92771 950 aa8.85□□□□□ -0.99
BRCA2-205ENST00000533776 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
BRCA2-205ENST00000533776 WDR70Q9NW82 654 aa8.85□□□□□ -0.99
BRCA2-205ENST00000533776 COL9A1P20849 921 aa8.84□□□□□ -0.99
BRCA2-205ENST00000533776 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
BRCA2-205ENST00000533776 E2F4Q16254 413 aa8.83□□□□□ -1
BRCA2-205ENST00000533776 RBM33Q96EV2 1170 aaKnown RBP8.83□□□□□ -1
BRCA2-205ENST00000533776 EPAS1Q99814 870 aa8.83□□□□□ -1
BRCA2-205ENST00000533776 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.83□□□□□ -1
BRCA2-205ENST00000533776 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
BRCA2-205ENST00000533776 ONECUT3O60422 494 aaPredicted RBP8.81□□□□□ -1
BRCA2-205ENST00000533776 PDIA6Q15084 440 aa8.81□□□□□ -1
BRCA2-205ENST00000533776 TRIM67Q6ZTA4 783 aa8.81□□□□□ -1
BRCA2-205ENST00000533776 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
BRCA2-205ENST00000533776 NBR1Q14596 966 aa8.8□□□□□ -1
BRCA2-205ENST00000533776 SPDYE16A6NNV3 312 aaPredicted RBP8.79□□□□□ -1
BRCA2-205ENST00000533776 C6orf132Q5T0Z8 1188 aa8.79□□□□□ -1
BRCA2-205ENST00000533776 SEPT9Q9UHD8 586 aaPredicted RBP8.79□□□□□ -1
BRCA2-205ENST00000533776 DGAT1O75907 488 aa8.78□□□□□ -1
BRCA2-205ENST00000533776 LRCH3Q96II8 777 aa8.78□□□□□ -1
BRCA2-205ENST00000533776 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
BRCA2-205ENST00000533776 MAP3K7O43318 606 aa8.76□□□□□ -1.01
BRCA2-205ENST00000533776 EN1Q05925 392 aaPredicted RBP8.76□□□□□ -1.01
BRCA2-205ENST00000533776 PKDCCQ504Y2 493 aa8.76□□□□□ -1.01
BRCA2-205ENST00000533776 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
BRCA2-205ENST00000533776 WIPF1O43516 503 aa8.75□□□□□ -1.01
BRCA2-205ENST00000533776 TSR1Q2NL82 804 aaKnown RBP8.75□□□□□ -1.01
BRCA2-205ENST00000533776 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
BRCA2-205ENST00000533776 GRXCR2A6NFK2 248 aa8.74□□□□□ -1.01
BRCA2-205ENST00000533776 WFS1O76024 890 aa8.74□□□□□ -1.01
BRCA2-205ENST00000533776 MTRQ99707 1265 aa8.74□□□□□ -1.01
BRCA2-205ENST00000533776 TRIM6-TRIM34B2RNG4 842 aa8.73□□□□□ -1.01
BRCA2-205ENST00000533776 ARIH1Q9Y4X5 557 aaPredicted RBP8.73□□□□□ -1.01
BRCA2-205ENST00000533776 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
BRCA2-205ENST00000533776 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
BRCA2-205ENST00000533776 PPP4CP60510 307 aa8.71□□□□□ -1.02
BRCA2-205ENST00000533776 ZNF516Q92618 1163 aa8.71□□□□□ -1.02
BRCA2-205ENST00000533776 TSKSQ9UJT2 592 aa8.68□□□□□ -1.02
BRCA2-205ENST00000533776 PRR20EP86478 221 aa8.67□□□□□ -1.02
BRCA2-205ENST00000533776 PRR20CP86479 221 aa8.67□□□□□ -1.02
BRCA2-205ENST00000533776 PRR20DP86480 221 aa8.67□□□□□ -1.02
BRCA2-205ENST00000533776 PRR20BP86481 221 aa8.67□□□□□ -1.02
BRCA2-205ENST00000533776 PRR20AP86496 221 aa8.67□□□□□ -1.02
BRCA2-205ENST00000533776 NFX1Q12986 1120 aaKnown RBP8.67□□□□□ -1.02
BRCA2-205ENST00000533776 CDHR5Q9HBB8 845 aa8.67□□□□□ -1.02
BRCA2-205ENST00000533776 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
BRCA2-205ENST00000533776 OSBPP22059 807 aa8.65□□□□□ -1.02
BRCA2-205ENST00000533776 SUZ12Q15022 739 aaKnown RBP8.65□□□□□ -1.02
BRCA2-205ENST00000533776 PACS2Q86VP3 889 aa8.65□□□□□ -1.02
BRCA2-205ENST00000533776 KCNV2Q8TDN2 545 aa8.65□□□□□ -1.02
BRCA2-205ENST00000533776 CDCA7LQ96GN5 454 aa8.65□□□□□ -1.02
BRCA2-205ENST00000533776 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
BRCA2-205ENST00000533776 AAASQ9NRG9 546 aa8.64□□□□□ -1.03
BRCA2-205ENST00000533776 SMAPO00193 183 aa8.63□□□□□ -1.03
BRCA2-205ENST00000533776 GGCXP38435 758 aa8.63□□□□□ -1.03
BRCA2-205ENST00000533776 PRSS12P56730 875 aa8.63□□□□□ -1.03
BRCA2-205ENST00000533776 EMID1Q96A84 441 aaPredicted RBP8.63□□□□□ -1.03
BRCA2-205ENST00000533776 ST8SIA5O15466 376 aa8.62□□□□□ -1.03
BRCA2-205ENST00000533776 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
BRCA2-205ENST00000533776 ARHGEF1Q92888 912 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms