RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ADAM33Q9BZ11 813 aa6.62□□□□□ -1.35
ATM-220ENST00000533526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATM-220ENST00000533526 CDAN1Q8IWY9 1227 aa6.61□□□□□ -1.35
ATM-220ENST00000533526 RBM33Q96EV2 1170 aaKnown RBP6.61□□□□□ -1.35
ATM-220ENST00000533526 NUTM2FA1L443 756 aa6.58□□□□□ -1.36
ATM-220ENST00000533526 PPP1R3GB7ZBB8 358 aa6.58□□□□□ -1.36
ATM-220ENST00000533526 KCNK17Q96T54 332 aa6.58□□□□□ -1.36
ATM-220ENST00000533526 SLC4A5Q9BY07 1137 aa6.58□□□□□ -1.36
ATM-220ENST00000533526 ONECUT3O60422 494 aaPredicted RBP6.57□□□□□ -1.36
ATM-220ENST00000533526 PRIM1P49642 420 aaKnown RBP6.57□□□□□ -1.36
ATM-220ENST00000533526 TSR1Q2NL82 804 aaKnown RBP6.57□□□□□ -1.36
ATM-220ENST00000533526 RBM26Q5T8P6 1007 aaKnown RBP6.57□□□□□ -1.36
ATM-220ENST00000533526 POTEEQ6S8J3 1075 aa6.57□□□□□ -1.36
ATM-220ENST00000533526 TK2O00142 265 aa6.56□□□□□ -1.36
ATM-220ENST00000533526 FCHSD2O94868 740 aa6.56□□□□□ -1.36
ATM-220ENST00000533526 PSEN2P49810 448 aa6.56□□□□□ -1.36
ATM-220ENST00000533526 LMOD2Q6P5Q4 547 aa6.56□□□□□ -1.36
ATM-220ENST00000533526 AXIN2Q9Y2T1 843 aa6.56□□□□□ -1.36
ATM-220ENST00000533526 LSM11P83369 360 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATM-220ENST00000533526 GPIHBP1Q8IV16 184 aa6.55□□□□□ -1.36
ATM-220ENST00000533526 COL9A1P20849 921 aa6.54□□□□□ -1.36
ATM-220ENST00000533526 PTGDRQ13258 359 aa6.54□□□□□ -1.36
ATM-220ENST00000533526 HIC1Q14526 733 aa6.54□□□□□ -1.36
ATM-220ENST00000533526 ZBED2Q9BTP6 218 aa6.54□□□□□ -1.36
ATM-220ENST00000533526 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
ATM-220ENST00000533526 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
ATM-220ENST00000533526 NPDC1Q9NQX5 325 aaPredicted RBP6.54□□□□□ -1.36
ATM-220ENST00000533526 RBM27Q9P2N5 1060 aaKnown RBP6.54□□□□□ -1.36
ATM-220ENST00000533526 PRSS12P56730 875 aa6.53□□□□□ -1.36
ATM-220ENST00000533526 DMRTA1Q5VZB9 504 aa6.53□□□□□ -1.36
ATM-220ENST00000533526 ANKRD13DQ6ZTN6 518 aa6.53□□□□□ -1.36
ATM-220ENST00000533526 GNPATO15228 680 aa6.52□□□□□ -1.37
ATM-220ENST00000533526 PACS2Q86VP3 889 aa6.52□□□□□ -1.37
ATM-220ENST00000533526 CDCA7LQ96GN5 454 aa6.52□□□□□ -1.37
ATM-220ENST00000533526 CDHR5Q9HBB8 845 aa6.52□□□□□ -1.37
ATM-220ENST00000533526 PLSCR2Q9NRY7 297 aa6.52□□□□□ -1.37
ATM-220ENST00000533526 VPS9D1Q9Y2B5 631 aa6.52□□□□□ -1.37
ATM-220ENST00000533526 TRIM6-TRIM34B2RNG4 842 aa6.51□□□□□ -1.37
ATM-220ENST00000533526 ADGRD1Q6QNK2 874 aa6.51□□□□□ -1.37
ATM-220ENST00000533526 STAC3Q96MF2 364 aa6.51□□□□□ -1.37
ATM-220ENST00000533526 RABGEF1Q9UJ41 708 aa6.51□□□□□ -1.37
ATM-220ENST00000533526 PROX2Q3B8N5 592 aa6.49□□□□□ -1.37
ATM-220ENST00000533526 TTC13Q8NBP0 860 aa6.49□□□□□ -1.37
ATM-220ENST00000533526 NBPF3Q9H094 633 aa6.49□□□□□ -1.37
ATM-220ENST00000533526 KIAA1468Q9P260 1216 aa6.49□□□□□ -1.37
ATM-220ENST00000533526 PADI6Q6TGC4 694 aa6.48□□□□□ -1.37
ATM-220ENST00000533526 ZC3H15Q8WU90 426 aaKnown RBP6.48□□□□□ -1.37
ATM-220ENST00000533526 NBPF26B4DH59 902 aa6.47□□□□□ -1.37
ATM-220ENST00000533526 BHMG1C9JSJ3 638 aaPredicted RBP6.47□□□□□ -1.37
ATM-220ENST00000533526 GPR37O15354 613 aa6.47□□□□□ -1.37
ATM-220ENST00000533526 HRO43593 1189 aa6.47□□□□□ -1.37
ATM-220ENST00000533526 LAPTM4BQ86VI4 370 aa6.47□□□□□ -1.37
ATM-220ENST00000533526 TSKSQ9UJT2 592 aa6.47□□□□□ -1.37
ATM-220ENST00000533526 ZMYND10O75800 440 aa6.46□□□□□ -1.38
ATM-220ENST00000533526 OATP04181 439 aa6.46□□□□□ -1.38
ATM-220ENST00000533526 MRPL50Q8N5N7 158 aaKnown RBP6.46□□□□□ -1.38
ATM-220ENST00000533526 TATDN2Q93075 761 aa6.46□□□□□ -1.38
ATM-220ENST00000533526 MINK1Q8N4C8 1332 aaPredicted RBP6.46□□□□□ -1.38
ATM-220ENST00000533526 BARGINQ6ZT62 677 aa6.45□□□□□ -1.38
ATM-220ENST00000533526 KRI1Q8N9T8 703 aaKnown RBP6.45□□□□□ -1.38
ATM-220ENST00000533526 RBM46Q8TBY0 533 aaKnown RBP6.45□□□□□ -1.38
ATM-220ENST00000533526 PNMA3Q9UL41 463 aa6.45□□□□□ -1.38
ATM-220ENST00000533526 GOLGA8CPA6NN73 597 aa6.44□□□□□ -1.38
ATM-220ENST00000533526 MAP2K5Q13163 448 aa6.44□□□□□ -1.38
ATM-220ENST00000533526 NUDT18Q6ZVK8 323 aa6.44□□□□□ -1.38
ATM-220ENST00000533526 FAM198AQ9UFP1 575 aa6.44□□□□□ -1.38
ATM-220ENST00000533526 IRF6O14896 467 aa6.43□□□□□ -1.38
ATM-220ENST00000533526 FECHP22830 423 aa6.43□□□□□ -1.38
ATM-220ENST00000533526 HDGFP51858 240 aaKnown RBP6.43□□□□□ -1.38
ATM-220ENST00000533526 FAM98CQ17RN3 349 aaKnown RBP6.43□□□□□ -1.38
ATM-220ENST00000533526 SPNS2Q8IVW8 549 aa6.43□□□□□ -1.38
ATM-220ENST00000533526 ADGRG1Q9Y653 693 aa6.43□□□□□ -1.38
ATM-220ENST00000533526 EYA1Q99502 592 aa6.42□□□□□ -1.38
ATM-220ENST00000533526 MYT1LQ9UL68 1186 aa6.41□□□□□ -1.38
ATM-220ENST00000533526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.4□□□□□ -1.38
ATM-220ENST00000533526 PXYLP1Q8TE99 480 aa6.4□□□□□ -1.38
ATM-220ENST00000533526 ZFRQ96KR1 1074 aaKnown RBP6.4□□□□□ -1.38
ATM-220ENST00000533526 SEPT9Q9UHD8 586 aaPredicted RBP6.4□□□□□ -1.38
ATM-220ENST00000533526 SMAPO00193 183 aa6.39□□□□□ -1.39
ATM-220ENST00000533526 DNAJB2P25686 324 aa6.39□□□□□ -1.39
ATM-220ENST00000533526 SLC4A3P48751 1232 aa6.39□□□□□ -1.39
ATM-220ENST00000533526 METTL3Q86U44 580 aaKnown RBP6.39□□□□□ -1.39
ATM-220ENST00000533526 AK7Q96M32 723 aa6.39□□□□□ -1.39
ATM-220ENST00000533526 ANKK1Q8NFD2 765 aa6.38□□□□□ -1.39
ATM-220ENST00000533526 WNT2BQ93097 391 aa6.38□□□□□ -1.39
ATM-220ENST00000533526 RCCD1A6NED2 376 aa6.37□□□□□ -1.39
ATM-220ENST00000533526 C3orf80F5H4A9 247 aa6.37□□□□□ -1.39
ATM-220ENST00000533526 FAM161AQ3B820 660 aa6.37□□□□□ -1.39
ATM-220ENST00000533526 TPRNQ4KMQ1 711 aa6.37□□□□□ -1.39
ATM-220ENST00000533526 NECTIN2Q92692 538 aa6.37□□□□□ -1.39
ATM-220ENST00000533526 CCDC102AQ96A19 550 aa6.37□□□□□ -1.39
ATM-220ENST00000533526 MMRN1Q13201 1228 aa6.36□□□□□ -1.39
ATM-220ENST00000533526 RNF166Q96A37 237 aaPredicted RBP6.36□□□□□ -1.39
ATM-220ENST00000533526 LRCH3Q96II8 777 aa6.36□□□□□ -1.39
ATM-220ENST00000533526 TMEM134Q9H6X4 195 aa6.36□□□□□ -1.39
ATM-220ENST00000533526 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.36□□□□□ -1.39
ATM-220ENST00000533526 SOWAHBA6NEL2 793 aa6.35□□□□□ -1.39
ATM-220ENST00000533526 RSPH4AQ5TD94 716 aa6.35□□□□□ -1.39
ATM-220ENST00000533526 SAMD7Q7Z3H4 446 aa6.35□□□□□ -1.39
ATM-220ENST00000533526 SLF2Q8IX21 1173 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms