RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
RAD50-209ENST00000533482 SPRYD3Q8NCJ5 442 aa15.97■□□□□ 0.15
RAD50-209ENST00000533482 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
RAD50-209ENST00000533482 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
RAD50-209ENST00000533482 ANP32BQ92688 251 aaKnown RBP15.94■□□□□ 0.14
RAD50-209ENST00000533482 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
RAD50-209ENST00000533482 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
RAD50-209ENST00000533482 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
RAD50-209ENST00000533482 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
RAD50-209ENST00000533482 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
RAD50-209ENST00000533482 APBB1O00213 710 aa15.93■□□□□ 0.14
RAD50-209ENST00000533482 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
RAD50-209ENST00000533482 CFAP70Q5T0N1 1121 aa15.93■□□□□ 0.14
RAD50-209ENST00000533482 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
RAD50-209ENST00000533482 NAIPQ13075 1403 aa15.92■□□□□ 0.14
RAD50-209ENST00000533482 APAF1O14727 1248 aa15.92■□□□□ 0.14
RAD50-209ENST00000533482 PDE3BQ13370 1112 aa15.92■□□□□ 0.14
RAD50-209ENST00000533482 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
RAD50-209ENST00000533482 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
RAD50-209ENST00000533482 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
RAD50-209ENST00000533482 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
RAD50-209ENST00000533482 TERF2IPQ9NYB0 399 aa15.91■□□□□ 0.14
RAD50-209ENST00000533482 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
RAD50-209ENST00000533482 CRBNQ96SW2 442 aa15.9■□□□□ 0.14
RAD50-209ENST00000533482 ARHGAP5Q13017 1502 aa15.9■□□□□ 0.14
RAD50-209ENST00000533482 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
RAD50-209ENST00000533482 ELL2O00472 640 aaPredicted RBP15.9■□□□□ 0.14
RAD50-209ENST00000533482 PCF11O94913 1555 aaKnown RBP15.9■□□□□ 0.14
RAD50-209ENST00000533482 CDCA7LQ96GN5 454 aa15.89■□□□□ 0.14
RAD50-209ENST00000533482 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
RAD50-209ENST00000533482 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
RAD50-209ENST00000533482 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
RAD50-209ENST00000533482 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.13
RAD50-209ENST00000533482 LTV1Q96GA3 475 aaPredicted RBP15.89■□□□□ 0.13
RAD50-209ENST00000533482 SLC4A3P48751 1232 aa15.88■□□□□ 0.13
RAD50-209ENST00000533482 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
RAD50-209ENST00000533482 C9orf84Q5VXU9 1444 aa15.87■□□□□ 0.13
RAD50-209ENST00000533482 NGDNQ8NEJ9 315 aaKnown RBP15.87■□□□□ 0.13
RAD50-209ENST00000533482 KIAA0586Q9BVV6 1533 aa15.86■□□□□ 0.13
RAD50-209ENST00000533482 ITPRIPQ8IWB1 547 aa15.86■□□□□ 0.13
RAD50-209ENST00000533482 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
RAD50-209ENST00000533482 PNNQ9H307 717 aaKnown RBP15.86■□□□□ 0.13
RAD50-209ENST00000533482 SCAPERQ9BY12 1400 aa15.86■□□□□ 0.13
RAD50-209ENST00000533482 PDE4AP27815 886 aa15.85■□□□□ 0.13
RAD50-209ENST00000533482 EHBP1L1Q8N3D4 1523 aa15.84■□□□□ 0.13
RAD50-209ENST00000533482 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
RAD50-209ENST00000533482 SMC4Q9NTJ3 1288 aa15.84■□□□□ 0.13
RAD50-209ENST00000533482 CENPJQ9HC77 1338 aaPredicted RBP15.84■□□□□ 0.13
RAD50-209ENST00000533482 DAPK1P53355 1430 aa15.84■□□□□ 0.13
RAD50-209ENST00000533482 MIA2Q96PC5 1412 aa15.84■□□□□ 0.13
RAD50-209ENST00000533482 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.13
RAD50-209ENST00000533482 MS4A1P11836 297 aa15.83■□□□□ 0.13
RAD50-209ENST00000533482 EID1Q9Y6B2 187 aa15.83■□□□□ 0.13
RAD50-209ENST00000533482 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
RAD50-209ENST00000533482 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
RAD50-209ENST00000533482 COG6Q9Y2V7 657 aa15.82■□□□□ 0.12
RAD50-209ENST00000533482 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
RAD50-209ENST00000533482 EVC2Q86UK5 1308 aa15.81■□□□□ 0.12
RAD50-209ENST00000533482 GGNBP2Q9H3C7 697 aa15.81■□□□□ 0.12
RAD50-209ENST00000533482 IQGAP2Q13576 1575 aa15.8■□□□□ 0.12
RAD50-209ENST00000533482 PNISRQ8TF01 805 aaKnown RBP15.79■□□□□ 0.12
RAD50-209ENST00000533482 KIAA1107Q9UPP5 1409 aa15.79■□□□□ 0.12
RAD50-209ENST00000533482 CGNL1Q0VF96 1302 aa15.79■□□□□ 0.12
RAD50-209ENST00000533482 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
RAD50-209ENST00000533482 AKNAQ7Z591 1439 aa15.78■□□□□ 0.12
RAD50-209ENST00000533482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.78■□□□□ 0.12
RAD50-209ENST00000533482 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
RAD50-209ENST00000533482 OS9Q13438 667 aaPredicted RBP15.78■□□□□ 0.12
RAD50-209ENST00000533482 AMPHP49418 695 aa15.77■□□□□ 0.12
RAD50-209ENST00000533482 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.11
RAD50-209ENST00000533482 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
RAD50-209ENST00000533482 SLC12A5Q9H2X9 1139 aa15.76■□□□□ 0.11
RAD50-209ENST00000533482 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
RAD50-209ENST00000533482 IPO8O15397 1037 aaKnown RBP15.76■□□□□ 0.11
RAD50-209ENST00000533482 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
RAD50-209ENST00000533482 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
RAD50-209ENST00000533482 PTPRKQ15262 1439 aa15.75■□□□□ 0.11
RAD50-209ENST00000533482 GOLGA6L22H0YM25 854 aa15.75■□□□□ 0.11
RAD50-209ENST00000533482 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
RAD50-209ENST00000533482 SLC4A10Q6U841 1118 aa15.75■□□□□ 0.11
RAD50-209ENST00000533482 ABCC5O15440 1437 aa15.74■□□□□ 0.11
RAD50-209ENST00000533482 GZF1Q9H116 711 aaPredicted RBP15.74■□□□□ 0.11
RAD50-209ENST00000533482 FANCIQ9NVI1 1328 aa15.74■□□□□ 0.11
RAD50-209ENST00000533482 E9PSI1 815 aa15.73■□□□□ 0.11
RAD50-209ENST00000533482 ZNF330Q9Y3S2 320 aaPredicted RBP15.73■□□□□ 0.11
RAD50-209ENST00000533482 SUPT6HQ7KZ85 1726 aaKnown RBP15.73■□□□□ 0.11
RAD50-209ENST00000533482 ANKRD30BQ9BXX2 1392 aa15.73■□□□□ 0.11
RAD50-209ENST00000533482 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
RAD50-209ENST00000533482 TRIM44Q96DX7 344 aaPredicted RBP15.73■□□□□ 0.11
RAD50-209ENST00000533482 CASC1Q6TDU7 716 aa15.72■□□□□ 0.11
RAD50-209ENST00000533482 HMOX1P09601 288 aa15.72■□□□□ 0.11
RAD50-209ENST00000533482 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
RAD50-209ENST00000533482 MTHFSP49914 203 aa15.71■□□□□ 0.11
RAD50-209ENST00000533482 PMFBP1Q8TBY8 1022 aa15.71■□□□□ 0.11
RAD50-209ENST00000533482 COG3Q96JB2 828 aa15.71■□□□□ 0.11
RAD50-209ENST00000533482 CHMP4BQ9H444 224 aaKnown RBP15.71■□□□□ 0.11
RAD50-209ENST00000533482 BRD4O60885 1362 aaPredicted RBP15.71■□□□□ 0.11
RAD50-209ENST00000533482 NUTM2GQ5VZR2 741 aa15.7■□□□□ 0.1
RAD50-209ENST00000533482 PPP2R1AP30153 589 aa15.7■□□□□ 0.1
RAD50-209ENST00000533482 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms