RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DNTTIP2Q5QJE6 756 aaKnown RBP22.18■■□□□ 1.14
PHRF1-205ENST00000533464 SLKQ9H2G2 1235 aaPredicted RBP22.18■■□□□ 1.14
PHRF1-205ENST00000533464 CUX1P39880 1505 aa22.17■■□□□ 1.14
PHRF1-205ENST00000533464 STK31Q9BXU1 1019 aa22.17■■□□□ 1.14
PHRF1-205ENST00000533464 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
PHRF1-205ENST00000533464 PLIN1O60240 522 aa22.16■■□□□ 1.14
PHRF1-205ENST00000533464 KIF7Q2M1P5 1343 aa22.15■■□□□ 1.14
PHRF1-205ENST00000533464 CSB-PGBD3P0DP91 1061 aa22.15■■□□□ 1.14
PHRF1-205ENST00000533464 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
PHRF1-205ENST00000533464 IPO9Q96P70 1041 aaKnown RBP22.14■■□□□ 1.13
PHRF1-205ENST00000533464 CGNL1Q0VF96 1302 aa22.13■■□□□ 1.13
PHRF1-205ENST00000533464 CCDC7Q96M83 1385 aa22.13■■□□□ 1.13
PHRF1-205ENST00000533464 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
PHRF1-205ENST00000533464 EVC2Q86UK5 1308 aa22.13■■□□□ 1.13
PHRF1-205ENST00000533464 MFAP1P55081 439 aaKnown RBP22.12■■□□□ 1.13
PHRF1-205ENST00000533464 ANKRD50Q9ULJ7 1429 aa22.12■■□□□ 1.13
PHRF1-205ENST00000533464 BCL2L13Q9BXK5 485 aa22.12■■□□□ 1.13
PHRF1-205ENST00000533464 AMPHP49418 695 aa22.12■■□□□ 1.13
PHRF1-205ENST00000533464 EXOC6Q8TAG9 804 aa22.12■■□□□ 1.13
PHRF1-205ENST00000533464 APAF1O14727 1248 aa22.12■■□□□ 1.13
PHRF1-205ENST00000533464 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
PHRF1-205ENST00000533464 CDK11BP21127 795 aaKnown RBP22.11■■□□□ 1.13
PHRF1-205ENST00000533464 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
PHRF1-205ENST00000533464 GOLGA6L4A6NEF3 574 aa22.11■■□□□ 1.13
PHRF1-205ENST00000533464 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
PHRF1-205ENST00000533464 KIAA1211Q6ZU35 1233 aa22.1■■□□□ 1.13
PHRF1-205ENST00000533464 SLC4A10Q6U841 1118 aa22.1■■□□□ 1.13
PHRF1-205ENST00000533464 RRBP1Q9P2E9 1410 aaKnown RBP22.1■■□□□ 1.13
PHRF1-205ENST00000533464 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
PHRF1-205ENST00000533464 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
PHRF1-205ENST00000533464 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
PHRF1-205ENST00000533464 E9PSI1 815 aa22.09■■□□□ 1.13
PHRF1-205ENST00000533464 LTV1Q96GA3 475 aaPredicted RBP22.08■■□□□ 1.13
PHRF1-205ENST00000533464 CHMP4AQ9BY43 222 aa22.08■■□□□ 1.12
PHRF1-205ENST00000533464 ELL2O00472 640 aaPredicted RBP22.07■■□□□ 1.12
PHRF1-205ENST00000533464 NAP1L5Q96NT1 182 aaPredicted RBP22.07■■□□□ 1.12
PHRF1-205ENST00000533464 HMMRO75330 724 aa22.06■■□□□ 1.12
PHRF1-205ENST00000533464 L1TD1Q5T7N2 865 aaKnown RBP22.06■■□□□ 1.12
PHRF1-205ENST00000533464 ZNF330Q9Y3S2 320 aaPredicted RBP22.05■■□□□ 1.12
PHRF1-205ENST00000533464 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
PHRF1-205ENST00000533464 GRIN2BQ13224 1484 aa22.05■■□□□ 1.12
PHRF1-205ENST00000533464 CRBNQ96SW2 442 aa22.05■■□□□ 1.12
PHRF1-205ENST00000533464 NESP48681 1621 aa22.04■■□□□ 1.12
PHRF1-205ENST00000533464 CENPQQ7L2Z9 268 aaPredicted RBP22.03■■□□□ 1.12
PHRF1-205ENST00000533464 GBP4Q96PP9 640 aa22.03■■□□□ 1.12
PHRF1-205ENST00000533464 COG3Q96JB2 828 aa22.03■■□□□ 1.12
PHRF1-205ENST00000533464 GZF1Q9H116 711 aaPredicted RBP22.02■■□□□ 1.12
PHRF1-205ENST00000533464 COG6Q9Y2V7 657 aa22.01■■□□□ 1.11
PHRF1-205ENST00000533464 PDE4AP27815 886 aa22.01■■□□□ 1.11
PHRF1-205ENST00000533464 CNTLNQ9NXG0 1405 aa22■■□□□ 1.11
PHRF1-205ENST00000533464 PRDM2Q13029 1718 aa22■■□□□ 1.11
PHRF1-205ENST00000533464 AFAP1Q8N556 730 aa22■■□□□ 1.11
PHRF1-205ENST00000533464 ZKSCAN2Q63HK3 967 aa21.99■■□□□ 1.11
PHRF1-205ENST00000533464 TRIM6-TRIM34B2RNG4 842 aa21.99■■□□□ 1.11
PHRF1-205ENST00000533464 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
PHRF1-205ENST00000533464 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
PHRF1-205ENST00000533464 HDAC5Q9UQL6 1122 aa21.95■■□□□ 1.1
PHRF1-205ENST00000533464 MIA2Q96PC5 1412 aa21.94■■□□□ 1.1
PHRF1-205ENST00000533464 FAM161AQ3B820 660 aa21.94■■□□□ 1.1
PHRF1-205ENST00000533464 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
PHRF1-205ENST00000533464 NGEFQ8N5V2 710 aa21.93■■□□□ 1.1
PHRF1-205ENST00000533464 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
PHRF1-205ENST00000533464 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
PHRF1-205ENST00000533464 CHMP3Q9Y3E7 222 aa21.92■■□□□ 1.1
PHRF1-205ENST00000533464 GOLGA6L6A8MZA4 724 aa21.91■■□□□ 1.1
PHRF1-205ENST00000533464 ANKRD45Q5TZF3 282 aa21.9■■□□□ 1.1
PHRF1-205ENST00000533464 TMEM132EQ6IEE7 984 aa21.9■■□□□ 1.1
PHRF1-205ENST00000533464 FOXD4L1Q9NU39 408 aa21.9■■□□□ 1.1
PHRF1-205ENST00000533464 MSNP26038 577 aaKnown RBP21.9■■□□□ 1.1
PHRF1-205ENST00000533464 RIPK4P57078 832 aa21.9■■□□□ 1.1
PHRF1-205ENST00000533464 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
PHRF1-205ENST00000533464 GPATCH3Q96I76 525 aa21.89■■□□□ 1.1
PHRF1-205ENST00000533464 NRDCO43847 1150 aa21.89■■□□□ 1.09
PHRF1-205ENST00000533464 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
PHRF1-205ENST00000533464 PTMSP20962 102 aa21.89■■□□□ 1.09
PHRF1-205ENST00000533464 NBPF8Q3BBV2 869 aa21.89■■□□□ 1.09
PHRF1-205ENST00000533464 TULP1O00294 542 aaPredicted RBP21.88■■□□□ 1.09
PHRF1-205ENST00000533464 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
PHRF1-205ENST00000533464 SLC4A3P48751 1232 aa21.88■■□□□ 1.09
PHRF1-205ENST00000533464 RUNDC1Q96C34 613 aa21.88■■□□□ 1.09
PHRF1-205ENST00000533464 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
PHRF1-205ENST00000533464 CFAP70Q5T0N1 1121 aa21.88■■□□□ 1.09
PHRF1-205ENST00000533464 GORABQ5T7V8 394 aa21.88■■□□□ 1.09
PHRF1-205ENST00000533464 NBPF1Q3BBV0 1214 aa21.87■■□□□ 1.09
PHRF1-205ENST00000533464 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
PHRF1-205ENST00000533464 NOL8Q76FK4 1167 aaKnown RBP21.86■■□□□ 1.09
PHRF1-205ENST00000533464 ADAMTS8Q9UP79 889 aa21.86■■□□□ 1.09
PHRF1-205ENST00000533464 ARHGAP5Q13017 1502 aa21.86■■□□□ 1.09
PHRF1-205ENST00000533464 HFM1A2PYH4 1435 aa21.86■■□□□ 1.09
PHRF1-205ENST00000533464 GGNBP2Q9H3C7 697 aa21.85■■□□□ 1.09
PHRF1-205ENST00000533464 GNL2Q13823 731 aaKnown RBP21.84■■□□□ 1.09
PHRF1-205ENST00000533464 BRD4O60885 1362 aaPredicted RBP21.84■■□□□ 1.09
PHRF1-205ENST00000533464 DZIP1LQ8IYY4 767 aaKnown RBP21.84■■□□□ 1.09
PHRF1-205ENST00000533464 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
PHRF1-205ENST00000533464 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.09
PHRF1-205ENST00000533464 TAF7LQ5H9L4 462 aa21.83■■□□□ 1.09
PHRF1-205ENST00000533464 DRC7Q8IY82 874 aa21.83■■□□□ 1.08
PHRF1-205ENST00000533464 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
PHRF1-205ENST00000533464 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
PHRF1-205ENST00000533464 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms