RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CFTRP13569 1480 aa15.58■□□□□ 0.08
BDNF-218ENST00000533246 AFAP1Q8N556 730 aa15.58■□□□□ 0.08
BDNF-218ENST00000533246 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.08
BDNF-218ENST00000533246 KIF15Q9NS87 1388 aa15.57■□□□□ 0.08
BDNF-218ENST00000533246 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
BDNF-218ENST00000533246 ARID3AQ99856 593 aa15.57■□□□□ 0.08
BDNF-218ENST00000533246 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
BDNF-218ENST00000533246 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
BDNF-218ENST00000533246 CRBNQ96SW2 442 aa15.56■□□□□ 0.08
BDNF-218ENST00000533246 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
BDNF-218ENST00000533246 SMC4Q9NTJ3 1288 aa15.56■□□□□ 0.08
BDNF-218ENST00000533246 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
BDNF-218ENST00000533246 CDCA7LQ96GN5 454 aa15.55■□□□□ 0.08
BDNF-218ENST00000533246 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
BDNF-218ENST00000533246 TRIM44Q96DX7 344 aaPredicted RBP15.55■□□□□ 0.08
BDNF-218ENST00000533246 IPO9Q96P70 1041 aaKnown RBP15.55■□□□□ 0.08
BDNF-218ENST00000533246 GZF1Q9H116 711 aaPredicted RBP15.55■□□□□ 0.08
BDNF-218ENST00000533246 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
BDNF-218ENST00000533246 GOLGA6L22H0YM25 854 aa15.54■□□□□ 0.08
BDNF-218ENST00000533246 RRP1P56182 461 aaKnown RBP15.53■□□□□ 0.08
BDNF-218ENST00000533246 COG6Q9Y2V7 657 aa15.53■□□□□ 0.08
BDNF-218ENST00000533246 CUX1P39880 1505 aa15.53■□□□□ 0.08
BDNF-218ENST00000533246 MS4A1P11836 297 aa15.53■□□□□ 0.08
BDNF-218ENST00000533246 PDE3BQ13370 1112 aa15.53■□□□□ 0.08
BDNF-218ENST00000533246 CASKIN1Q8WXD9 1431 aa15.52■□□□□ 0.08
BDNF-218ENST00000533246 PDE4AP27815 886 aa15.52■□□□□ 0.07
BDNF-218ENST00000533246 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.07
BDNF-218ENST00000533246 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.07
BDNF-218ENST00000533246 OS9Q13438 667 aaPredicted RBP15.51■□□□□ 0.07
BDNF-218ENST00000533246 MINK1Q8N4C8 1332 aaPredicted RBP15.51■□□□□ 0.07
BDNF-218ENST00000533246 MFAP1P55081 439 aaKnown RBP15.5■□□□□ 0.07
BDNF-218ENST00000533246 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
BDNF-218ENST00000533246 PLCB2Q00722 1185 aa15.49■□□□□ 0.07
BDNF-218ENST00000533246 RWDD1Q9H446 243 aaPredicted RBP15.49■□□□□ 0.07
BDNF-218ENST00000533246 C11orf95C9JLR9 678 aaPredicted RBP15.48■□□□□ 0.07
BDNF-218ENST00000533246 CASC1Q6TDU7 716 aa15.48■□□□□ 0.07
BDNF-218ENST00000533246 RTF1Q92541 710 aaKnown RBP15.48■□□□□ 0.07
BDNF-218ENST00000533246 LTV1Q96GA3 475 aaPredicted RBP15.48■□□□□ 0.07
BDNF-218ENST00000533246 USP35Q9P2H5 1018 aa15.48■□□□□ 0.07
BDNF-218ENST00000533246 IPO8O15397 1037 aaKnown RBP15.47■□□□□ 0.07
BDNF-218ENST00000533246 TERF2IPQ9NYB0 399 aa15.47■□□□□ 0.07
BDNF-218ENST00000533246 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
BDNF-218ENST00000533246 CFAP70Q5T0N1 1121 aa15.47■□□□□ 0.07
BDNF-218ENST00000533246 HSCBQ8IWL3 235 aa15.47■□□□□ 0.07
BDNF-218ENST00000533246 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
BDNF-218ENST00000533246 SLC4A10Q6U841 1118 aa15.46■□□□□ 0.07
BDNF-218ENST00000533246 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
BDNF-218ENST00000533246 HDGFP51858 240 aaKnown RBP15.44■□□□□ 0.06
BDNF-218ENST00000533246 POLA1P09884 1462 aaPredicted RBP15.44■□□□□ 0.06
BDNF-218ENST00000533246 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
BDNF-218ENST00000533246 KCNJ4P48050 445 aa15.44■□□□□ 0.06
BDNF-218ENST00000533246 EIF3AQ14152 1382 aaKnown RBP15.44■□□□□ 0.06
BDNF-218ENST00000533246 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
BDNF-218ENST00000533246 GSE1Q14687 1217 aa15.43■□□□□ 0.06
BDNF-218ENST00000533246 PAXIP1Q6ZW49 1069 aaPredicted RBP15.43■□□□□ 0.06
BDNF-218ENST00000533246 CNTLNQ9NXG0 1405 aa15.42■□□□□ 0.06
BDNF-218ENST00000533246 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
BDNF-218ENST00000533246 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
BDNF-218ENST00000533246 FGD1P98174 961 aa15.41■□□□□ 0.06
BDNF-218ENST00000533246 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
BDNF-218ENST00000533246 NGDNQ8NEJ9 315 aaKnown RBP15.4■□□□□ 0.06
BDNF-218ENST00000533246 GGNBP2Q9H3C7 697 aa15.4■□□□□ 0.06
BDNF-218ENST00000533246 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
BDNF-218ENST00000533246 AEBP2Q6ZN18 517 aaPredicted RBP15.4■□□□□ 0.06
BDNF-218ENST00000533246 BBXQ8WY36 941 aaPredicted RBP15.4■□□□□ 0.06
BDNF-218ENST00000533246 VGFO15240 615 aaPredicted RBP15.39■□□□□ 0.05
BDNF-218ENST00000533246 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
BDNF-218ENST00000533246 PMFBP1Q8TBY8 1022 aa15.38■□□□□ 0.05
BDNF-218ENST00000533246 FYCO1Q9BQS8 1478 aa15.38■□□□□ 0.05
BDNF-218ENST00000533246 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
BDNF-218ENST00000533246 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
BDNF-218ENST00000533246 E9PSI1 815 aa15.37■□□□□ 0.05
BDNF-218ENST00000533246 TAF7LQ5H9L4 462 aa15.37■□□□□ 0.05
BDNF-218ENST00000533246 NOL8Q76FK4 1167 aaKnown RBP15.37■□□□□ 0.05
BDNF-218ENST00000533246 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
BDNF-218ENST00000533246 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
BDNF-218ENST00000533246 CGNL1Q0VF96 1302 aa15.37■□□□□ 0.05
BDNF-218ENST00000533246 AKNAQ7Z591 1439 aa15.36■□□□□ 0.05
BDNF-218ENST00000533246 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
BDNF-218ENST00000533246 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
BDNF-218ENST00000533246 SLC12A5Q9H2X9 1139 aa15.36■□□□□ 0.05
BDNF-218ENST00000533246 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
BDNF-218ENST00000533246 NAIPQ13075 1403 aa15.36■□□□□ 0.05
BDNF-218ENST00000533246 AMPHP49418 695 aa15.35■□□□□ 0.05
BDNF-218ENST00000533246 DNTTIP2Q5QJE6 756 aaKnown RBP15.35■□□□□ 0.05
BDNF-218ENST00000533246 HMOX1P09601 288 aa15.35■□□□□ 0.05
BDNF-218ENST00000533246 MTHFSP49914 203 aa15.35■□□□□ 0.05
BDNF-218ENST00000533246 EVC2Q86UK5 1308 aa15.34■□□□□ 0.05
BDNF-218ENST00000533246 RRP9O43818 475 aaKnown RBP15.34■□□□□ 0.05
BDNF-218ENST00000533246 FAM161AQ3B820 660 aa15.34■□□□□ 0.05
BDNF-218ENST00000533246 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.05
BDNF-218ENST00000533246 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
BDNF-218ENST00000533246 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
BDNF-218ENST00000533246 RIPK4P57078 832 aa15.33■□□□□ 0.04
BDNF-218ENST00000533246 SKAP1Q86WV1 359 aa15.33■□□□□ 0.04
BDNF-218ENST00000533246 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
BDNF-218ENST00000533246 BICRAQ9NZM4 1560 aa15.33■□□□□ 0.04
BDNF-218ENST00000533246 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
BDNF-218ENST00000533246 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
BDNF-218ENST00000533246 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms