RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
C11orf54-212ENST00000533154 LCE2BO14633 110 aa10.5□□□□□ -0.73
C11orf54-212ENST00000533154 LAPTM4AQ15012 233 aa10.5□□□□□ -0.73
C11orf54-212ENST00000533154 TRAF7Q6Q0C0 670 aa10.5□□□□□ -0.73
C11orf54-212ENST00000533154 KCNC4Q03721 635 aa10.49□□□□□ -0.73
C11orf54-212ENST00000533154 GFRA3O60609 400 aa10.48□□□□□ -0.73
C11orf54-212ENST00000533154 PROX2Q3B8N5 592 aa10.48□□□□□ -0.73
C11orf54-212ENST00000533154 PPP1R15BQ5SWA1 713 aa10.48□□□□□ -0.73
C11orf54-212ENST00000533154 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
C11orf54-212ENST00000533154 EVI5O60447 810 aa10.47□□□□□ -0.73
C11orf54-212ENST00000533154 SOWAHBA6NEL2 793 aa10.46□□□□□ -0.73
C11orf54-212ENST00000533154 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.73
C11orf54-212ENST00000533154 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
C11orf54-212ENST00000533154 NBR1Q14596 966 aa10.45□□□□□ -0.74
C11orf54-212ENST00000533154 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
C11orf54-212ENST00000533154 NYAP1Q6ZVC0 841 aa10.44□□□□□ -0.74
C11orf54-212ENST00000533154 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
C11orf54-212ENST00000533154 COL9A1P20849 921 aa10.41□□□□□ -0.74
C11orf54-212ENST00000533154 ZFRQ96KR1 1074 aaKnown RBP10.41□□□□□ -0.74
C11orf54-212ENST00000533154 LAPTM4BQ86VI4 370 aa10.4□□□□□ -0.74
C11orf54-212ENST00000533154 KIAA1468Q9P260 1216 aa10.38□□□□□ -0.75
C11orf54-212ENST00000533154 MAP3K9P80192 1104 aa10.37□□□□□ -0.75
C11orf54-212ENST00000533154 SEPT9Q9UHD8 586 aaPredicted RBP10.37□□□□□ -0.75
C11orf54-212ENST00000533154 NKX1-1Q15270 411 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-212ENST00000533154 PCDHGA10Q9Y5H3 936 aa10.36□□□□□ -0.75
C11orf54-212ENST00000533154 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-212ENST00000533154 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-212ENST00000533154 ZNF787Q6DD87 383 aa10.34□□□□□ -0.75
C11orf54-212ENST00000533154 PRKD2Q9BZL6 878 aa10.34□□□□□ -0.75
C11orf54-212ENST00000533154 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
C11orf54-212ENST00000533154 PDE4AP27815 886 aa10.33□□□□□ -0.76
C11orf54-212ENST00000533154 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
C11orf54-212ENST00000533154 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
C11orf54-212ENST00000533154 TSR3Q9UJK0 312 aaKnown RBP10.32□□□□□ -0.76
C11orf54-212ENST00000533154 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
C11orf54-212ENST00000533154 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
C11orf54-212ENST00000533154 RYDENQ9NUL5 291 aaKnown RBP10.3□□□□□ -0.76
C11orf54-212ENST00000533154 FBXW7Q969H0 707 aa10.29□□□□□ -0.76
C11orf54-212ENST00000533154 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
C11orf54-212ENST00000533154 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
C11orf54-212ENST00000533154 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
C11orf54-212ENST00000533154 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
C11orf54-212ENST00000533154 ONECUT3O60422 494 aaPredicted RBP10.25□□□□□ -0.77
C11orf54-212ENST00000533154 PHF14O94880 888 aa10.25□□□□□ -0.77
C11orf54-212ENST00000533154 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
C11orf54-212ENST00000533154 EMILIN3Q9NT22 766 aa10.23□□□□□ -0.77
C11orf54-212ENST00000533154 PPP4CP60510 307 aa10.22□□□□□ -0.77
C11orf54-212ENST00000533154 C6orf132Q5T0Z8 1188 aa10.22□□□□□ -0.77
C11orf54-212ENST00000533154 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
C11orf54-212ENST00000533154 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
C11orf54-212ENST00000533154 PDZRN3Q9UPQ7 1066 aa10.21□□□□□ -0.77
C11orf54-212ENST00000533154 V9GY48 417 aaPredicted RBP10.21□□□□□ -0.77
C11orf54-212ENST00000533154 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
C11orf54-212ENST00000533154 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
C11orf54-212ENST00000533154 MTRQ99707 1265 aa10.17□□□□□ -0.78
C11orf54-212ENST00000533154 EPAS1Q99814 870 aa10.16□□□□□ -0.78
C11orf54-212ENST00000533154 MFSD10Q14728 455 aa10.15□□□□□ -0.78
C11orf54-212ENST00000533154 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
C11orf54-212ENST00000533154 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.15□□□□□ -0.78
C11orf54-212ENST00000533154 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
C11orf54-212ENST00000533154 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
C11orf54-212ENST00000533154 ZNF516Q92618 1163 aa10.12□□□□□ -0.79
C11orf54-212ENST00000533154 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
C11orf54-212ENST00000533154 SMAPO00193 183 aa10.09□□□□□ -0.79
C11orf54-212ENST00000533154 ABCC9O60706 1549 aa10.07□□□□□ -0.8
C11orf54-212ENST00000533154 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
C11orf54-212ENST00000533154 DDX12PQ92771 950 aa10.07□□□□□ -0.8
C11orf54-212ENST00000533154 RNF40O75150 1001 aa10.06□□□□□ -0.8
C11orf54-212ENST00000533154 ERICH6Q7L0X2 663 aa10.06□□□□□ -0.8
C11orf54-212ENST00000533154 DPYSL4O14531 572 aa10.05□□□□□ -0.8
C11orf54-212ENST00000533154 GGCXP38435 758 aa10.04□□□□□ -0.8
C11orf54-212ENST00000533154 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
C11orf54-212ENST00000533154 MAP3K7O43318 606 aa10.03□□□□□ -0.8
C11orf54-212ENST00000533154 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
C11orf54-212ENST00000533154 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
C11orf54-212ENST00000533154 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
C11orf54-212ENST00000533154 PKDCCQ504Y2 493 aa10.02□□□□□ -0.81
C11orf54-212ENST00000533154 POTECB2RU33 542 aa10.01□□□□□ -0.81
C11orf54-212ENST00000533154 APLP1P51693 650 aa10.01□□□□□ -0.81
C11orf54-212ENST00000533154 KCNV2Q8TDN2 545 aa10.01□□□□□ -0.81
C11orf54-212ENST00000533154 MYT1Q01538 1121 aa10□□□□□ -0.81
C11orf54-212ENST00000533154 WDR70Q9NW82 654 aa10□□□□□ -0.81
C11orf54-212ENST00000533154 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-212ENST00000533154 COPS2P61201 443 aa9.99□□□□□ -0.81
C11orf54-212ENST00000533154 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
C11orf54-212ENST00000533154 CDCA7LQ96GN5 454 aa9.99□□□□□ -0.81
C11orf54-212ENST00000533154 TRIM67Q6ZTA4 783 aa9.98□□□□□ -0.81
C11orf54-212ENST00000533154 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
C11orf54-212ENST00000533154 C3orf80F5H4A9 247 aa9.97□□□□□ -0.81
C11orf54-212ENST00000533154 CADPS2Q86UW7 1296 aa9.97□□□□□ -0.81
C11orf54-212ENST00000533154 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
C11orf54-212ENST00000533154 PRSS12P56730 875 aa9.96□□□□□ -0.82
C11orf54-212ENST00000533154 LMOD2Q6P5Q4 547 aa9.96□□□□□ -0.82
C11orf54-212ENST00000533154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.82
C11orf54-212ENST00000533154 TATDN2Q93075 761 aa9.96□□□□□ -0.82
C11orf54-212ENST00000533154 NBPF26B4DH59 902 aa9.95□□□□□ -0.82
C11orf54-212ENST00000533154 DGAT1O75907 488 aa9.95□□□□□ -0.82
C11orf54-212ENST00000533154 HDGFP51858 240 aaKnown RBP9.95□□□□□ -0.82
C11orf54-212ENST00000533154 TMUB1Q9BVT8 246 aa9.95□□□□□ -0.82
C11orf54-212ENST00000533154 SLC19A1P41440 591 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms