RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
PCDHA9-202ENST00000532602 ERICH6BQ5W0A0 696 aa18.62■□□□□ 0.57
PCDHA9-202ENST00000532602 EVA1CP58658 441 aa18.61■□□□□ 0.57
PCDHA9-202ENST00000532602 GORABQ5T7V8 394 aa18.61■□□□□ 0.57
PCDHA9-202ENST00000532602 RWDD1Q9H446 243 aaPredicted RBP18.61■□□□□ 0.57
PCDHA9-202ENST00000532602 UACAQ9BZF9 1416 aa18.6■□□□□ 0.57
PCDHA9-202ENST00000532602 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
PCDHA9-202ENST00000532602 COG3Q96JB2 828 aa18.59■□□□□ 0.57
PCDHA9-202ENST00000532602 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
PCDHA9-202ENST00000532602 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
PCDHA9-202ENST00000532602 CLSTN1O94985 981 aa18.59■□□□□ 0.57
PCDHA9-202ENST00000532602 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
PCDHA9-202ENST00000532602 HMMRO75330 724 aa18.58■□□□□ 0.57
PCDHA9-202ENST00000532602 EVC2Q86UK5 1308 aa18.58■□□□□ 0.56
PCDHA9-202ENST00000532602 GPATCH3Q96I76 525 aa18.58■□□□□ 0.56
PCDHA9-202ENST00000532602 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
PCDHA9-202ENST00000532602 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
PCDHA9-202ENST00000532602 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
PCDHA9-202ENST00000532602 PRG4Q92954 1404 aaPredicted RBP18.55■□□□□ 0.56
PCDHA9-202ENST00000532602 NOP58Q9Y2X3 529 aaKnown RBP18.55■□□□□ 0.56
PCDHA9-202ENST00000532602 KIF21BO75037 1637 aa18.55■□□□□ 0.56
PCDHA9-202ENST00000532602 USP47Q96K76 1375 aa18.55■□□□□ 0.56
PCDHA9-202ENST00000532602 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
PCDHA9-202ENST00000532602 NGEFQ8N5V2 710 aa18.54■□□□□ 0.56
PCDHA9-202ENST00000532602 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
PCDHA9-202ENST00000532602 L1TD1Q5T7N2 865 aaKnown RBP18.54■□□□□ 0.56
PCDHA9-202ENST00000532602 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
PCDHA9-202ENST00000532602 BCL2L13Q9BXK5 485 aa18.53■□□□□ 0.56
PCDHA9-202ENST00000532602 G3V3G9 751 aa18.53■□□□□ 0.56
PCDHA9-202ENST00000532602 DCAF8Q5TAQ9 597 aa18.53■□□□□ 0.56
PCDHA9-202ENST00000532602 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
PCDHA9-202ENST00000532602 TRIM6-TRIM34B2RNG4 842 aa18.53■□□□□ 0.56
PCDHA9-202ENST00000532602 PSME1Q06323 249 aa18.53■□□□□ 0.56
PCDHA9-202ENST00000532602 AFAP1Q8N556 730 aa18.53■□□□□ 0.56
PCDHA9-202ENST00000532602 GTF2E1P29083 439 aaPredicted RBP18.52■□□□□ 0.56
PCDHA9-202ENST00000532602 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.56
PCDHA9-202ENST00000532602 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
PCDHA9-202ENST00000532602 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
PCDHA9-202ENST00000532602 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
PCDHA9-202ENST00000532602 CGNL1Q0VF96 1302 aa18.51■□□□□ 0.55
PCDHA9-202ENST00000532602 CENPJQ9HC77 1338 aaPredicted RBP18.51■□□□□ 0.55
PCDHA9-202ENST00000532602 C1orf141Q5JVX7 400 aa18.51■□□□□ 0.55
PCDHA9-202ENST00000532602 PMFBP1Q8TBY8 1022 aa18.51■□□□□ 0.55
PCDHA9-202ENST00000532602 CUX1P39880 1505 aa18.5■□□□□ 0.55
PCDHA9-202ENST00000532602 MYBBP1AQ9BQG0 1328 aaKnown RBP18.5■□□□□ 0.55
PCDHA9-202ENST00000532602 MEX3CQ5U5Q3 659 aaKnown RBP18.5■□□□□ 0.55
PCDHA9-202ENST00000532602 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
PCDHA9-202ENST00000532602 CCDC34Q96HJ3 373 aa18.49■□□□□ 0.55
PCDHA9-202ENST00000532602 MSH5O43196 834 aa18.48■□□□□ 0.55
PCDHA9-202ENST00000532602 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
PCDHA9-202ENST00000532602 CHAF1AQ13111 956 aaPredicted RBP18.48■□□□□ 0.55
PCDHA9-202ENST00000532602 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
PCDHA9-202ENST00000532602 MFAP1P55081 439 aaKnown RBP18.47■□□□□ 0.55
PCDHA9-202ENST00000532602 NCOA2Q15596 1464 aa18.47■□□□□ 0.55
PCDHA9-202ENST00000532602 SNAPC4Q5SXM2 1469 aa18.47■□□□□ 0.55
PCDHA9-202ENST00000532602 PLIN1O60240 522 aa18.47■□□□□ 0.55
PCDHA9-202ENST00000532602 PTMSP20962 102 aa18.47■□□□□ 0.55
PCDHA9-202ENST00000532602 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
PCDHA9-202ENST00000532602 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
PCDHA9-202ENST00000532602 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.46■□□□□ 0.55
PCDHA9-202ENST00000532602 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
PCDHA9-202ENST00000532602 NOL8Q76FK4 1167 aaKnown RBP18.45■□□□□ 0.54
PCDHA9-202ENST00000532602 PDE3BQ13370 1112 aa18.45■□□□□ 0.54
PCDHA9-202ENST00000532602 CFTRP13569 1480 aa18.45■□□□□ 0.54
PCDHA9-202ENST00000532602 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
PCDHA9-202ENST00000532602 GBP4Q96PP9 640 aa18.44■□□□□ 0.54
PCDHA9-202ENST00000532602 FRAT2O75474 233 aaPredicted RBP18.43■□□□□ 0.54
PCDHA9-202ENST00000532602 DRC7Q8IY82 874 aa18.43■□□□□ 0.54
PCDHA9-202ENST00000532602 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
PCDHA9-202ENST00000532602 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
PCDHA9-202ENST00000532602 KIAA2012Q0VF49 1180 aa18.42■□□□□ 0.54
PCDHA9-202ENST00000532602 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
PCDHA9-202ENST00000532602 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
PCDHA9-202ENST00000532602 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
PCDHA9-202ENST00000532602 ATF3P18847 181 aa18.41■□□□□ 0.54
PCDHA9-202ENST00000532602 IFT140Q96RY7 1462 aa18.41■□□□□ 0.54
PCDHA9-202ENST00000532602 HSP90B1P14625 803 aaKnown RBP18.4■□□□□ 0.54
PCDHA9-202ENST00000532602 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
PCDHA9-202ENST00000532602 HMOX1P09601 288 aa18.4■□□□□ 0.54
PCDHA9-202ENST00000532602 TEFQ10587 303 aa18.4■□□□□ 0.54
PCDHA9-202ENST00000532602 RTN4Q9NQC3 1192 aaKnown RBP18.39■□□□□ 0.53
PCDHA9-202ENST00000532602 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
PCDHA9-202ENST00000532602 APAF1O14727 1248 aa18.39■□□□□ 0.53
PCDHA9-202ENST00000532602 SLKQ9H2G2 1235 aaPredicted RBP18.39■□□□□ 0.53
PCDHA9-202ENST00000532602 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
PCDHA9-202ENST00000532602 TTC5Q8N0Z6 440 aa18.38■□□□□ 0.53
PCDHA9-202ENST00000532602 SYAP1Q96A49 352 aaPredicted RBP18.37■□□□□ 0.53
PCDHA9-202ENST00000532602 GGNBP2Q9H3C7 697 aa18.37■□□□□ 0.53
PCDHA9-202ENST00000532602 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
PCDHA9-202ENST00000532602 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
PCDHA9-202ENST00000532602 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
PCDHA9-202ENST00000532602 KIF3AQ9Y496 699 aa18.37■□□□□ 0.53
PCDHA9-202ENST00000532602 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
PCDHA9-202ENST00000532602 MSNP26038 577 aaKnown RBP18.36■□□□□ 0.53
PCDHA9-202ENST00000532602 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
PCDHA9-202ENST00000532602 TOMM22Q9NS69 142 aa18.36■□□□□ 0.53
PCDHA9-202ENST00000532602 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
PCDHA9-202ENST00000532602 RIPK4P57078 832 aa18.35■□□□□ 0.53
PCDHA9-202ENST00000532602 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
PCDHA9-202ENST00000532602 TPM4P67936 248 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms