RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 RGS20O76081 388 aa9.53□□□□□ -0.88
ATM-217ENST00000531957 EMILIN3Q9NT22 766 aa9.53□□□□□ -0.88
ATM-217ENST00000531957 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.89
ATM-217ENST00000531957 PHF14O94880 888 aa9.51□□□□□ -0.89
ATM-217ENST00000531957 RABGEF1Q9UJ41 708 aa9.51□□□□□ -0.89
ATM-217ENST00000531957 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
ATM-217ENST00000531957 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
ATM-217ENST00000531957 EPAS1Q99814 870 aa9.47□□□□□ -0.89
ATM-217ENST00000531957 A0A0G2JS52 829 aa9.46□□□□□ -0.9
ATM-217ENST00000531957 LAPTM4BQ86VI4 370 aa9.46□□□□□ -0.9
ATM-217ENST00000531957 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
ATM-217ENST00000531957 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
ATM-217ENST00000531957 PROX2Q3B8N5 592 aa9.44□□□□□ -0.9
ATM-217ENST00000531957 NYAP1Q6ZVC0 841 aa9.44□□□□□ -0.9
ATM-217ENST00000531957 COL9A1P20849 921 aa9.43□□□□□ -0.9
ATM-217ENST00000531957 DPYSL4O14531 572 aa9.4□□□□□ -0.9
ATM-217ENST00000531957 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
ATM-217ENST00000531957 SOWAHBA6NEL2 793 aa9.39□□□□□ -0.91
ATM-217ENST00000531957 C6orf132Q5T0Z8 1188 aa9.39□□□□□ -0.91
ATM-217ENST00000531957 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
ATM-217ENST00000531957 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
ATM-217ENST00000531957 BCAMP50895 628 aa9.37□□□□□ -0.91
ATM-217ENST00000531957 IRX2Q9BZI1 471 aaPredicted RBP9.37□□□□□ -0.91
ATM-217ENST00000531957 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
ATM-217ENST00000531957 KIAA1468Q9P260 1216 aa9.37□□□□□ -0.91
ATM-217ENST00000531957 FAM98CQ17RN3 349 aaKnown RBP9.36□□□□□ -0.91
ATM-217ENST00000531957 PDIA6Q15084 440 aa9.34□□□□□ -0.91
ATM-217ENST00000531957 RBM33Q96EV2 1170 aaKnown RBP9.34□□□□□ -0.91
ATM-217ENST00000531957 SEPT9Q9UHD8 586 aaPredicted RBP9.34□□□□□ -0.91
ATM-217ENST00000531957 SPDYE16A6NNV3 312 aaPredicted RBP9.33□□□□□ -0.92
ATM-217ENST00000531957 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
ATM-217ENST00000531957 DDX12PQ92771 950 aa9.33□□□□□ -0.92
ATM-217ENST00000531957 LRCH3Q96II8 777 aa9.33□□□□□ -0.92
ATM-217ENST00000531957 NBR1Q14596 966 aa9.32□□□□□ -0.92
ATM-217ENST00000531957 WDR70Q9NW82 654 aa9.32□□□□□ -0.92
ATM-217ENST00000531957 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.32□□□□□ -0.92
ATM-217ENST00000531957 MAP3K7O43318 606 aa9.31□□□□□ -0.92
ATM-217ENST00000531957 TSR3Q9UJK0 312 aaKnown RBP9.31□□□□□ -0.92
ATM-217ENST00000531957 KCNC4Q03721 635 aa9.3□□□□□ -0.92
ATM-217ENST00000531957 E2F4Q16254 413 aa9.3□□□□□ -0.92
ATM-217ENST00000531957 PACS2Q86VP3 889 aa9.3□□□□□ -0.92
ATM-217ENST00000531957 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
ATM-217ENST00000531957 HPS5Q9UPZ3 1129 aa9.29□□□□□ -0.92
ATM-217ENST00000531957 CERKQ8TCT0 537 aa9.28□□□□□ -0.92
ATM-217ENST00000531957 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
ATM-217ENST00000531957 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
ATM-217ENST00000531957 NBPF26B4DH59 902 aa9.24□□□□□ -0.93
ATM-217ENST00000531957 TSKSQ9UJT2 592 aa9.24□□□□□ -0.93
ATM-217ENST00000531957 ARIH1Q9Y4X5 557 aaPredicted RBP9.23□□□□□ -0.93
ATM-217ENST00000531957 PRSS12P56730 875 aa9.21□□□□□ -0.94
ATM-217ENST00000531957 PPP4CP60510 307 aa9.21□□□□□ -0.94
ATM-217ENST00000531957 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.94
ATM-217ENST00000531957 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
ATM-217ENST00000531957 KCNV2Q8TDN2 545 aa9.18□□□□□ -0.94
ATM-217ENST00000531957 NECTIN2Q92692 538 aa9.18□□□□□ -0.94
ATM-217ENST00000531957 GRXCR2A6NFK2 248 aa9.17□□□□□ -0.94
ATM-217ENST00000531957 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
ATM-217ENST00000531957 LAPTM4AQ15012 233 aa9.17□□□□□ -0.94
ATM-217ENST00000531957 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
ATM-217ENST00000531957 Q6ZNB5 142 aa9.16□□□□□ -0.94
ATM-217ENST00000531957 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
ATM-217ENST00000531957 HDGFP51858 240 aaKnown RBP9.15□□□□□ -0.94
ATM-217ENST00000531957 TATDN2Q93075 761 aa9.15□□□□□ -0.94
ATM-217ENST00000531957 SMAPO00193 183 aa9.14□□□□□ -0.95
ATM-217ENST00000531957 PRIM1P49642 420 aaKnown RBP9.14□□□□□ -0.95
ATM-217ENST00000531957 IL21Q9HBE4 155 aa9.14□□□□□ -0.95
ATM-217ENST00000531957 RNF40O75150 1001 aa9.13□□□□□ -0.95
ATM-217ENST00000531957 FAM198AQ9UFP1 575 aa9.13□□□□□ -0.95
ATM-217ENST00000531957 TJAP1Q5JTD0 557 aa9.12□□□□□ -0.95
ATM-217ENST00000531957 MTRQ99707 1265 aa9.12□□□□□ -0.95
ATM-217ENST00000531957 CDHR5Q9HBB8 845 aa9.12□□□□□ -0.95
ATM-217ENST00000531957 SLC4A3P48751 1232 aa9.11□□□□□ -0.95
ATM-217ENST00000531957 OSBPP22059 807 aa9.1□□□□□ -0.95
ATM-217ENST00000531957 ARHGEF1Q92888 912 aaKnown RBP9.1□□□□□ -0.95
ATM-217ENST00000531957 NUDT18Q6ZVK8 323 aa9.09□□□□□ -0.95
ATM-217ENST00000531957 MLLT3P42568 568 aaPredicted RBP9.08□□□□□ -0.96
ATM-217ENST00000531957 SLF2Q8IX21 1173 aa9.08□□□□□ -0.96
ATM-217ENST00000531957 C3orf80F5H4A9 247 aa9.06□□□□□ -0.96
ATM-217ENST00000531957 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
ATM-217ENST00000531957 TTC13Q8NBP0 860 aa9.06□□□□□ -0.96
ATM-217ENST00000531957 PRR14Q9BWN1 585 aa9.06□□□□□ -0.96
ATM-217ENST00000531957 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
ATM-217ENST00000531957 V9GY48 417 aaPredicted RBP9.06□□□□□ -0.96
ATM-217ENST00000531957 GGCXP38435 758 aa9.05□□□□□ -0.96
ATM-217ENST00000531957 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
ATM-217ENST00000531957 PRKD2Q9BZL6 878 aa9.05□□□□□ -0.96
ATM-217ENST00000531957 APLP1P51693 650 aa9.04□□□□□ -0.96
ATM-217ENST00000531957 PPP1R18Q6NYC8 613 aa9.04□□□□□ -0.96
ATM-217ENST00000531957 GFRA3O60609 400 aa9.03□□□□□ -0.96
ATM-217ENST00000531957 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
ATM-217ENST00000531957 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
ATM-217ENST00000531957 SEMA3EO15041 775 aa9.02□□□□□ -0.97
ATM-217ENST00000531957 SWT1Q5T5J6 900 aaKnown RBP9.02□□□□□ -0.97
ATM-217ENST00000531957 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
ATM-217ENST00000531957 ZNF516Q92618 1163 aa8.99□□□□□ -0.97
ATM-217ENST00000531957 TRAF7Q6Q0C0 670 aa8.98□□□□□ -0.97
ATM-217ENST00000531957 TMUB1Q9BVT8 246 aa8.98□□□□□ -0.97
ATM-217ENST00000531957 DNAJB2P25686 324 aa8.97□□□□□ -0.97
ATM-217ENST00000531957 COPS2P61201 443 aa8.97□□□□□ -0.97
ATM-217ENST00000531957 EYA1Q99502 592 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms