RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 CAMK2BQ13554 666 aa13.81□□□□□ -0.2
CASP4-210ENST00000531546 PROX2Q3B8N5 592 aa13.81□□□□□ -0.2
CASP4-210ENST00000531546 COL9A1P20849 921 aa13.8□□□□□ -0.2
CASP4-210ENST00000531546 EPAS1Q99814 870 aa13.8□□□□□ -0.2
CASP4-210ENST00000531546 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
CASP4-210ENST00000531546 A0A0G2JS52 829 aa13.78□□□□□ -0.2
CASP4-210ENST00000531546 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
CASP4-210ENST00000531546 DPYSL4O14531 572 aa13.75□□□□□ -0.21
CASP4-210ENST00000531546 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
CASP4-210ENST00000531546 NYAP1Q6ZVC0 841 aa13.73□□□□□ -0.21
CASP4-210ENST00000531546 KIAA1468Q9P260 1216 aa13.72□□□□□ -0.21
CASP4-210ENST00000531546 SOWAHBA6NEL2 793 aa13.71□□□□□ -0.21
CASP4-210ENST00000531546 BCAMP50895 628 aa13.7□□□□□ -0.22
CASP4-210ENST00000531546 ZFRQ96KR1 1074 aaKnown RBP13.7□□□□□ -0.22
CASP4-210ENST00000531546 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
CASP4-210ENST00000531546 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
CASP4-210ENST00000531546 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
CASP4-210ENST00000531546 IRX2Q9BZI1 471 aaPredicted RBP13.66□□□□□ -0.22
CASP4-210ENST00000531546 DDX12PQ92771 950 aa13.65□□□□□ -0.22
CASP4-210ENST00000531546 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
CASP4-210ENST00000531546 SEPT9Q9UHD8 586 aaPredicted RBP13.65□□□□□ -0.22
CASP4-210ENST00000531546 FAM98CQ17RN3 349 aaKnown RBP13.64□□□□□ -0.23
CASP4-210ENST00000531546 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
CASP4-210ENST00000531546 NBR1Q14596 966 aa13.62□□□□□ -0.23
CASP4-210ENST00000531546 PDIA6Q15084 440 aa13.62□□□□□ -0.23
CASP4-210ENST00000531546 WBP1LQ9NX94 342 aa13.6□□□□□ -0.23
CASP4-210ENST00000531546 SPDYE16A6NNV3 312 aaPredicted RBP13.59□□□□□ -0.23
CASP4-210ENST00000531546 MAP3K7O43318 606 aa13.59□□□□□ -0.23
CASP4-210ENST00000531546 LRCH3Q96II8 777 aa13.59□□□□□ -0.23
CASP4-210ENST00000531546 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.59□□□□□ -0.23
CASP4-210ENST00000531546 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
CASP4-210ENST00000531546 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
CASP4-210ENST00000531546 KCNC4Q03721 635 aa13.56□□□□□ -0.24
CASP4-210ENST00000531546 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
CASP4-210ENST00000531546 HPS5Q9UPZ3 1129 aa13.55□□□□□ -0.24
CASP4-210ENST00000531546 TSR1Q2NL82 804 aaKnown RBP13.54□□□□□ -0.24
CASP4-210ENST00000531546 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
CASP4-210ENST00000531546 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
CASP4-210ENST00000531546 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
CASP4-210ENST00000531546 E2F4Q16254 413 aa13.5□□□□□ -0.25
CASP4-210ENST00000531546 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
CASP4-210ENST00000531546 ARIH1Q9Y4X5 557 aaPredicted RBP13.47□□□□□ -0.25
CASP4-210ENST00000531546 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
CASP4-210ENST00000531546 PRSS12P56730 875 aa13.45□□□□□ -0.26
CASP4-210ENST00000531546 PPP4CP60510 307 aa13.45□□□□□ -0.26
CASP4-210ENST00000531546 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
CASP4-210ENST00000531546 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
CASP4-210ENST00000531546 SAMD7Q7Z3H4 446 aa13.4□□□□□ -0.26
CASP4-210ENST00000531546 SMAPO00193 183 aa13.39□□□□□ -0.27
CASP4-210ENST00000531546 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
CASP4-210ENST00000531546 RBM27Q9P2N5 1060 aaKnown RBP13.39□□□□□ -0.27
CASP4-210ENST00000531546 TATDN2Q93075 761 aa13.38□□□□□ -0.27
CASP4-210ENST00000531546 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
CASP4-210ENST00000531546 Q6ZNB5 142 aa13.36□□□□□ -0.27
CASP4-210ENST00000531546 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
CASP4-210ENST00000531546 FAM198AQ9UFP1 575 aa13.36□□□□□ -0.27
CASP4-210ENST00000531546 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
CASP4-210ENST00000531546 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
CASP4-210ENST00000531546 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
CASP4-210ENST00000531546 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
CASP4-210ENST00000531546 OSBPP22059 807 aa13.33□□□□□ -0.28
CASP4-210ENST00000531546 NECTIN2Q92692 538 aa13.33□□□□□ -0.28
CASP4-210ENST00000531546 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
CASP4-210ENST00000531546 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
CASP4-210ENST00000531546 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
CASP4-210ENST00000531546 RNF40O75150 1001 aa13.31□□□□□ -0.28
CASP4-210ENST00000531546 NUDT18Q6ZVK8 323 aa13.31□□□□□ -0.28
CASP4-210ENST00000531546 MTRQ99707 1265 aa13.3□□□□□ -0.28
CASP4-210ENST00000531546 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
CASP4-210ENST00000531546 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
CASP4-210ENST00000531546 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
CASP4-210ENST00000531546 TTC13Q8NBP0 860 aa13.23□□□□□ -0.29
CASP4-210ENST00000531546 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
CASP4-210ENST00000531546 APLP1P51693 650 aa13.21□□□□□ -0.29
CASP4-210ENST00000531546 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
CASP4-210ENST00000531546 PRKD2Q9BZL6 878 aa13.21□□□□□ -0.29
CASP4-210ENST00000531546 GFRA3O60609 400 aa13.2□□□□□ -0.3
CASP4-210ENST00000531546 SWT1Q5T5J6 900 aaKnown RBP13.19□□□□□ -0.3
CASP4-210ENST00000531546 V9GY48 417 aaPredicted RBP13.19□□□□□ -0.3
CASP4-210ENST00000531546 NPDC1Q9NQX5 325 aaPredicted RBP13.18□□□□□ -0.3
CASP4-210ENST00000531546 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
CASP4-210ENST00000531546 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
CASP4-210ENST00000531546 GGCXP38435 758 aa13.16□□□□□ -0.3
CASP4-210ENST00000531546 ZNF516Q92618 1163 aa13.16□□□□□ -0.3
CASP4-210ENST00000531546 PRR14Q9BWN1 585 aa13.16□□□□□ -0.3
CASP4-210ENST00000531546 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
CASP4-210ENST00000531546 COPS2P61201 443 aa13.12□□□□□ -0.31
CASP4-210ENST00000531546 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
CASP4-210ENST00000531546 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
CASP4-210ENST00000531546 EYA1Q99502 592 aa13.11□□□□□ -0.31
CASP4-210ENST00000531546 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
CASP4-210ENST00000531546 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.32
CASP4-210ENST00000531546 ZPR1O75312 459 aa13.07□□□□□ -0.32
CASP4-210ENST00000531546 DNAJB2P25686 324 aa13.06□□□□□ -0.32
CASP4-210ENST00000531546 PCDHB3Q9Y5E6 796 aa13.06□□□□□ -0.32
CASP4-210ENST00000531546 MLLT3P42568 568 aaPredicted RBP13.05□□□□□ -0.32
CASP4-210ENST00000531546 LCE2BO14633 110 aa13.04□□□□□ -0.32
CASP4-210ENST00000531546 PTGDRQ13258 359 aa13.04□□□□□ -0.32
CASP4-210ENST00000531546 RBM46Q8TBY0 533 aaKnown RBP13.04□□□□□ -0.32
CASP4-210ENST00000531546 KCNV2Q8TDN2 545 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms