RNA–Protein interactions for RNA: ENST00000531171.5

RB1-206, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 4

Gene RB1, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-206ENST00000531171 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
RB1-206ENST00000531171 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
RB1-206ENST00000531171 C2orf72A6NCS6 295 aa10.85□□□□□ -0.67
RB1-206ENST00000531171 MFSD10Q14728 455 aa10.85□□□□□ -0.67
RB1-206ENST00000531171 GRIN2BQ13224 1484 aa10.85□□□□□ -0.67
RB1-206ENST00000531171 TMC2Q8TDI7 906 aa10.84□□□□□ -0.67
RB1-206ENST00000531171 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
RB1-206ENST00000531171 AQRO60306 1485 aaKnown RBP eCLIP10.83□□□□□ -0.68
RB1-206ENST00000531171 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
RB1-206ENST00000531171 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
RB1-206ENST00000531171 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
RB1-206ENST00000531171 ZNF608Q9ULD9 1512 aaPredicted RBP10.81□□□□□ -0.68
RB1-206ENST00000531171 SAMD9Q5K651 1589 aa10.81□□□□□ -0.68
RB1-206ENST00000531171 MAP3K1Q13233 1512 aa10.8□□□□□ -0.68
RB1-206ENST00000531171 ZEB1P37275 1124 aaPredicted RBP10.8□□□□□ -0.68
RB1-206ENST00000531171 FOXK1P85037 733 aa10.8□□□□□ -0.68
RB1-206ENST00000531171 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
RB1-206ENST00000531171 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
RB1-206ENST00000531171 CFAP43Q8NDM7 1665 aa10.79□□□□□ -0.68
RB1-206ENST00000531171 TIAM1Q13009 1591 aa10.79□□□□□ -0.68
RB1-206ENST00000531171 DSG2Q14126 1118 aa10.79□□□□□ -0.68
RB1-206ENST00000531171 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
RB1-206ENST00000531171 FHOD3Q2V2M9 1422 aa10.78□□□□□ -0.68
RB1-206ENST00000531171 PPP1R15BQ5SWA1 713 aa10.78□□□□□ -0.68
RB1-206ENST00000531171 FYCO1Q9BQS8 1478 aa10.77□□□□□ -0.69
RB1-206ENST00000531171 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
RB1-206ENST00000531171 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
RB1-206ENST00000531171 WDR70Q9NW82 654 aa10.76□□□□□ -0.69
RB1-206ENST00000531171 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
RB1-206ENST00000531171 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
RB1-206ENST00000531171 PLPP6Q8IY26 295 aa10.75□□□□□ -0.69
RB1-206ENST00000531171 CASKIN1Q8WXD9 1431 aa10.75□□□□□ -0.69
RB1-206ENST00000531171 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
RB1-206ENST00000531171 KANK4Q5T7N3 995 aaPredicted RBP10.74□□□□□ -0.69
RB1-206ENST00000531171 CAMK2BQ13554 666 aa10.73□□□□□ -0.69
RB1-206ENST00000531171 GRIN2AQ12879 1464 aa10.72□□□□□ -0.69
RB1-206ENST00000531171 LRRC9Q6ZRR7 1453 aa10.72□□□□□ -0.69
RB1-206ENST00000531171 UGGT2Q9NYU1 1516 aa10.7□□□□□ -0.7
RB1-206ENST00000531171 RRBP1Q9P2E9 1410 aaKnown RBP10.7□□□□□ -0.7
RB1-206ENST00000531171 E2F4Q16254 413 aa10.7□□□□□ -0.7
RB1-206ENST00000531171 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
RB1-206ENST00000531171 KIAA0586Q9BVV6 1533 aa10.68□□□□□ -0.7
RB1-206ENST00000531171 CCER1Q8TC90 406 aaPredicted RBP10.68□□□□□ -0.7
RB1-206ENST00000531171 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
RB1-206ENST00000531171 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
RB1-206ENST00000531171 KCNV2Q8TDN2 545 aa10.67□□□□□ -0.7
RB1-206ENST00000531171 ATP1B4Q9UN42 357 aaPredicted RBP10.67□□□□□ -0.7
RB1-206ENST00000531171 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
RB1-206ENST00000531171 EMILIN3Q9NT22 766 aa10.66□□□□□ -0.7
RB1-206ENST00000531171 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
RB1-206ENST00000531171 CCNB3Q8WWL7 1395 aa10.65□□□□□ -0.7
RB1-206ENST00000531171 CEP170Q5SW79 1584 aa10.65□□□□□ -0.7
RB1-206ENST00000531171 SLC34A2O95436 690 aa10.65□□□□□ -0.7
RB1-206ENST00000531171 CCDC18Q5T9S5 1454 aa10.64□□□□□ -0.71
RB1-206ENST00000531171 CHMP7Q8WUX9 453 aaPredicted RBP10.64□□□□□ -0.71
RB1-206ENST00000531171 OXER1Q8TDS5 423 aa10.63□□□□□ -0.71
RB1-206ENST00000531171 ARIH1Q9Y4X5 557 aaPredicted RBP10.63□□□□□ -0.71
RB1-206ENST00000531171 EHBP1L1Q8N3D4 1523 aa10.63□□□□□ -0.71
RB1-206ENST00000531171 NUP160Q12769 1436 aa10.62□□□□□ -0.71
RB1-206ENST00000531171 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
RB1-206ENST00000531171 DISP1Q96F81 1524 aa10.62□□□□□ -0.71
RB1-206ENST00000531171 SNPHO15079 494 aa10.61□□□□□ -0.71
RB1-206ENST00000531171 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
RB1-206ENST00000531171 PHLDB1Q86UU1 1377 aa10.61□□□□□ -0.71
RB1-206ENST00000531171 SUPT6HQ7KZ85 1726 aaKnown RBP10.61□□□□□ -0.71
RB1-206ENST00000531171 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
RB1-206ENST00000531171 MTUS2Q5JR59 1369 aa10.6□□□□□ -0.71
RB1-206ENST00000531171 UPF1Q92900 1129 aaKnown RBP eCLIP10.59□□□□□ -0.71
RB1-206ENST00000531171 CHD1O14646 1710 aa10.58□□□□□ -0.72
RB1-206ENST00000531171 RAPGEF6Q8TEU7 1601 aa10.58□□□□□ -0.72
RB1-206ENST00000531171 EPRSP07814 1512 aaKnown RBP10.58□□□□□ -0.72
RB1-206ENST00000531171 DPYSL4O14531 572 aa10.57□□□□□ -0.72
RB1-206ENST00000531171 PCDHGA4Q9Y5G9 962 aa10.57□□□□□ -0.72
RB1-206ENST00000531171 CARMIL2Q6F5E8 1435 aa10.57□□□□□ -0.72
RB1-206ENST00000531171 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
RB1-206ENST00000531171 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
RB1-206ENST00000531171 CDK13Q14004 1512 aaKnown RBP10.55□□□□□ -0.72
RB1-206ENST00000531171 RIMBP2O15034 1052 aa10.55□□□□□ -0.72
RB1-206ENST00000531171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.54□□□□□ -0.72
RB1-206ENST00000531171 MAGI3Q5TCQ9 1506 aa10.54□□□□□ -0.72
RB1-206ENST00000531171 MAP3K9P80192 1104 aa10.54□□□□□ -0.72
RB1-206ENST00000531171 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
RB1-206ENST00000531171 FGD6Q6ZV73 1430 aa10.54□□□□□ -0.72
RB1-206ENST00000531171 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
RB1-206ENST00000531171 ARHGEF11O15085 1522 aa10.53□□□□□ -0.72
RB1-206ENST00000531171 TBC1D12O60347 775 aa10.53□□□□□ -0.72
RB1-206ENST00000531171 FAM50AQ14320 339 aaKnown RBP10.53□□□□□ -0.72
RB1-206ENST00000531171 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.73
RB1-206ENST00000531171 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.73
RB1-206ENST00000531171 ITGAEP38570 1179 aa10.52□□□□□ -0.73
RB1-206ENST00000531171 PDIA6Q15084 440 aa10.52□□□□□ -0.73
RB1-206ENST00000531171 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
RB1-206ENST00000531171 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.73
RB1-206ENST00000531171 SPDYE16A6NNV3 312 aaPredicted RBP10.51□□□□□ -0.73
RB1-206ENST00000531171 KHSRPQ92945 711 aaKnown RBP eCLIP10.51□□□□□ -0.73
RB1-206ENST00000531171 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
RB1-206ENST00000531171 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
RB1-206ENST00000531171 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
RB1-206ENST00000531171 SHROOM2Q13796 1616 aa10.49□□□□□ -0.73
RB1-206ENST00000531171 ST18O60284 1047 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms