RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
CSDE1-214ENST00000530886 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
CSDE1-214ENST00000530886 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
CSDE1-214ENST00000530886 SKAP1Q86WV1 359 aa10.53□□□□□ -0.72
CSDE1-214ENST00000530886 USP19O94966 1318 aa10.53□□□□□ -0.72
CSDE1-214ENST00000530886 CENPQQ7L2Z9 268 aaPredicted RBP10.52□□□□□ -0.72
CSDE1-214ENST00000530886 ESPNB1AK53 854 aa10.52□□□□□ -0.73
CSDE1-214ENST00000530886 CCDC144AA2RUR9 1427 aa10.52□□□□□ -0.73
CSDE1-214ENST00000530886 TRPM1Q7Z4N2 1603 aa10.52□□□□□ -0.73
CSDE1-214ENST00000530886 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.73
CSDE1-214ENST00000530886 MRE11P49959 708 aa10.52□□□□□ -0.73
CSDE1-214ENST00000530886 LAMC1P11047 1609 aa10.51□□□□□ -0.73
CSDE1-214ENST00000530886 ANTXR1Q9H6X2 564 aa10.51□□□□□ -0.73
CSDE1-214ENST00000530886 ARHGEF12Q9NZN5 1544 aa10.51□□□□□ -0.73
CSDE1-214ENST00000530886 CLASP1Q7Z460 1538 aa10.5□□□□□ -0.73
CSDE1-214ENST00000530886 ROCK2O75116 1388 aaKnown RBP10.5□□□□□ -0.73
CSDE1-214ENST00000530886 LAMC3Q9Y6N6 1575 aa10.5□□□□□ -0.73
CSDE1-214ENST00000530886 UTP14CQ5TAP6 766 aaKnown RBP10.5□□□□□ -0.73
CSDE1-214ENST00000530886 MTUS2Q5JR59 1369 aa10.5□□□□□ -0.73
CSDE1-214ENST00000530886 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
CSDE1-214ENST00000530886 WDR62O43379 1518 aa10.49□□□□□ -0.73
CSDE1-214ENST00000530886 USP47Q96K76 1375 aa10.49□□□□□ -0.73
CSDE1-214ENST00000530886 DAPK1P53355 1430 aa10.49□□□□□ -0.73
CSDE1-214ENST00000530886 PDIA4P13667 645 aaKnown RBP10.49□□□□□ -0.73
CSDE1-214ENST00000530886 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
CSDE1-214ENST00000530886 RGS3P49796 1198 aa10.48□□□□□ -0.73
CSDE1-214ENST00000530886 ABCC5O15440 1437 aa10.48□□□□□ -0.73
CSDE1-214ENST00000530886 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
CSDE1-214ENST00000530886 BECN1Q14457 450 aa10.47□□□□□ -0.73
CSDE1-214ENST00000530886 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
CSDE1-214ENST00000530886 KIF15Q9NS87 1388 aa10.47□□□□□ -0.73
CSDE1-214ENST00000530886 ERBB4Q15303 1308 aa10.47□□□□□ -0.73
CSDE1-214ENST00000530886 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
CSDE1-214ENST00000530886 FOXD1Q16676 465 aa10.46□□□□□ -0.73
CSDE1-214ENST00000530886 EPRSP07814 1512 aaKnown RBP10.46□□□□□ -0.73
CSDE1-214ENST00000530886 KIAA0586Q9BVV6 1533 aa10.46□□□□□ -0.73
CSDE1-214ENST00000530886 RAD54L2Q9Y4B4 1467 aa10.46□□□□□ -0.73
CSDE1-214ENST00000530886 P3H3Q8IVL6 736 aa10.46□□□□□ -0.73
CSDE1-214ENST00000530886 PANK2Q9BZ23 570 aa10.46□□□□□ -0.74
CSDE1-214ENST00000530886 SCAPERQ9BY12 1400 aa10.46□□□□□ -0.74
CSDE1-214ENST00000530886 MYBBP1AQ9BQG0 1328 aaKnown RBP10.45□□□□□ -0.74
CSDE1-214ENST00000530886 NCLP19338 710 aaKnown RBP10.45□□□□□ -0.74
CSDE1-214ENST00000530886 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
CSDE1-214ENST00000530886 ADGRL2O95490 1459 aa10.45□□□□□ -0.74
CSDE1-214ENST00000530886 ITSN2Q9NZM3 1697 aa10.45□□□□□ -0.74
CSDE1-214ENST00000530886 CRBNQ96SW2 442 aa10.45□□□□□ -0.74
CSDE1-214ENST00000530886 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
CSDE1-214ENST00000530886 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
CSDE1-214ENST00000530886 OFD1O75665 1012 aa10.44□□□□□ -0.74
CSDE1-214ENST00000530886 MYH16Q9H6N6 1097 aa10.44□□□□□ -0.74
CSDE1-214ENST00000530886 ADCY10Q96PN6 1610 aa10.44□□□□□ -0.74
CSDE1-214ENST00000530886 CADPSQ9ULU8 1353 aa10.43□□□□□ -0.74
CSDE1-214ENST00000530886 RIPK4P57078 832 aa10.43□□□□□ -0.74
CSDE1-214ENST00000530886 KIAA1211Q6ZU35 1233 aa10.43□□□□□ -0.74
CSDE1-214ENST00000530886 TMC1Q8TDI8 760 aa10.43□□□□□ -0.74
CSDE1-214ENST00000530886 GRPEL1Q9HAV7 217 aa10.43□□□□□ -0.74
CSDE1-214ENST00000530886 MYO5CQ9NQX4 1742 aa10.43□□□□□ -0.74
CSDE1-214ENST00000530886 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
CSDE1-214ENST00000530886 RALBP1Q15311 655 aa10.42□□□□□ -0.74
CSDE1-214ENST00000530886 CDCA7LQ96GN5 454 aa10.42□□□□□ -0.74
CSDE1-214ENST00000530886 CDC42BPAQ5VT25 1732 aa10.42□□□□□ -0.74
CSDE1-214ENST00000530886 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
CSDE1-214ENST00000530886 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-214ENST00000530886 C20orf194Q5TEA3 1177 aa10.42□□□□□ -0.74
CSDE1-214ENST00000530886 ZNF521Q96K83 1311 aa10.42□□□□□ -0.74
CSDE1-214ENST00000530886 MCM4P33991 863 aa10.42□□□□□ -0.74
CSDE1-214ENST00000530886 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
CSDE1-214ENST00000530886 DMTNQ08495 405 aa10.41□□□□□ -0.74
CSDE1-214ENST00000530886 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-214ENST00000530886 PLXNC1O60486 1568 aa10.41□□□□□ -0.74
CSDE1-214ENST00000530886 EIF4G3O43432 1585 aaKnown RBP10.41□□□□□ -0.74
CSDE1-214ENST00000530886 TAF7LQ5H9L4 462 aa10.41□□□□□ -0.74
CSDE1-214ENST00000530886 PRDM15P57071 1507 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-214ENST00000530886 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.74
CSDE1-214ENST00000530886 BCL11BQ9C0K0 894 aaPredicted RBP10.4□□□□□ -0.74
CSDE1-214ENST00000530886 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
CSDE1-214ENST00000530886 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
CSDE1-214ENST00000530886 SENP3-EIF4A1A0A087X0R7 540 aa10.39□□□□□ -0.75
CSDE1-214ENST00000530886 PLIN1O60240 522 aa10.39□□□□□ -0.75
CSDE1-214ENST00000530886 PPP1R9BQ96SB3 815 aa10.39□□□□□ -0.75
CSDE1-214ENST00000530886 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
CSDE1-214ENST00000530886 MYOM1P52179 1685 aa10.39□□□□□ -0.75
CSDE1-214ENST00000530886 TRIM44Q96DX7 344 aaPredicted RBP10.38□□□□□ -0.75
CSDE1-214ENST00000530886 EIF3AQ14152 1382 aaKnown RBP10.38□□□□□ -0.75
CSDE1-214ENST00000530886 COL17A1Q9UMD9 1497 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-214ENST00000530886 PBRM1Q86U86 1689 aa10.37□□□□□ -0.75
CSDE1-214ENST00000530886 TRAK2O60296 914 aa10.37□□□□□ -0.75
CSDE1-214ENST00000530886 HS1BP3Q53T59 392 aa10.37□□□□□ -0.75
CSDE1-214ENST00000530886 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
CSDE1-214ENST00000530886 STAC3Q96MF2 364 aa10.37□□□□□ -0.75
CSDE1-214ENST00000530886 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
CSDE1-214ENST00000530886 ZSCAN30Q86W11 494 aa10.37□□□□□ -0.75
CSDE1-214ENST00000530886 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-214ENST00000530886 PTPRGP23470 1445 aa10.36□□□□□ -0.75
CSDE1-214ENST00000530886 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
CSDE1-214ENST00000530886 CCDC173Q0VFZ6 552 aa10.36□□□□□ -0.75
CSDE1-214ENST00000530886 TARBP1Q13395 1621 aaKnown RBP10.36□□□□□ -0.75
CSDE1-214ENST00000530886 KIF20AO95235 890 aa10.36□□□□□ -0.75
CSDE1-214ENST00000530886 TRMT2AQ8IZ69 625 aaKnown RBP10.36□□□□□ -0.75
CSDE1-214ENST00000530886 DYNC1I1O14576 645 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms