RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
BDNF-215ENST00000530861 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
BDNF-215ENST00000530861 NCOA1Q15788 1441 aa16.6■□□□□ 0.25
BDNF-215ENST00000530861 APAF1O14727 1248 aa16.59■□□□□ 0.25
BDNF-215ENST00000530861 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.25
BDNF-215ENST00000530861 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.25
BDNF-215ENST00000530861 FAM69CQ0P6D2 419 aa16.58■□□□□ 0.25
BDNF-215ENST00000530861 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.25
BDNF-215ENST00000530861 KANK1Q14678 1352 aa16.58■□□□□ 0.25
BDNF-215ENST00000530861 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
BDNF-215ENST00000530861 NUDCQ9Y266 331 aa16.58■□□□□ 0.24
BDNF-215ENST00000530861 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
BDNF-215ENST00000530861 AKNAQ7Z591 1439 aa16.58■□□□□ 0.24
BDNF-215ENST00000530861 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
BDNF-215ENST00000530861 SLC12A5Q9H2X9 1139 aa16.57■□□□□ 0.24
BDNF-215ENST00000530861 NEFMP07197 916 aa16.56■□□□□ 0.24
BDNF-215ENST00000530861 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
BDNF-215ENST00000530861 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
BDNF-215ENST00000530861 MIA2Q96PC5 1412 aa16.56■□□□□ 0.24
BDNF-215ENST00000530861 CAMSAP2Q08AD1 1489 aa16.56■□□□□ 0.24
BDNF-215ENST00000530861 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
BDNF-215ENST00000530861 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
BDNF-215ENST00000530861 CNTLNQ9NXG0 1405 aa16.55■□□□□ 0.24
BDNF-215ENST00000530861 SYNJ2O15056 1496 aa16.55■□□□□ 0.24
BDNF-215ENST00000530861 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
BDNF-215ENST00000530861 CUL7Q14999 1698 aa16.54■□□□□ 0.24
BDNF-215ENST00000530861 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
BDNF-215ENST00000530861 ATP10BO94823 1461 aa16.54■□□□□ 0.24
BDNF-215ENST00000530861 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
BDNF-215ENST00000530861 HECW1Q76N89 1606 aa16.53■□□□□ 0.24
BDNF-215ENST00000530861 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.24
BDNF-215ENST00000530861 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
BDNF-215ENST00000530861 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.24
BDNF-215ENST00000530861 FBLN1P23142 703 aa16.52■□□□□ 0.23
BDNF-215ENST00000530861 SLC4A3P48751 1232 aa16.51■□□□□ 0.23
BDNF-215ENST00000530861 RALBP1Q15311 655 aa16.51■□□□□ 0.23
BDNF-215ENST00000530861 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
BDNF-215ENST00000530861 PLEKHH2Q8IVE3 1493 aa16.51■□□□□ 0.23
BDNF-215ENST00000530861 GGNBP2Q9H3C7 697 aa16.51■□□□□ 0.23
BDNF-215ENST00000530861 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
BDNF-215ENST00000530861 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
BDNF-215ENST00000530861 DISP1Q96F81 1524 aa16.48■□□□□ 0.23
BDNF-215ENST00000530861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.48■□□□□ 0.23
BDNF-215ENST00000530861 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
BDNF-215ENST00000530861 ANP32EQ9BTT0 268 aa16.48■□□□□ 0.23
BDNF-215ENST00000530861 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
BDNF-215ENST00000530861 KDM6BO15054 1643 aa16.47■□□□□ 0.23
BDNF-215ENST00000530861 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.23
BDNF-215ENST00000530861 UGGT2Q9NYU1 1516 aa16.46■□□□□ 0.23
BDNF-215ENST00000530861 ADGRF5Q8IZF2 1346 aa16.46■□□□□ 0.23
BDNF-215ENST00000530861 APBB1O00213 710 aa16.44■□□□□ 0.22
BDNF-215ENST00000530861 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
BDNF-215ENST00000530861 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
BDNF-215ENST00000530861 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
BDNF-215ENST00000530861 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
BDNF-215ENST00000530861 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
BDNF-215ENST00000530861 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
BDNF-215ENST00000530861 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
BDNF-215ENST00000530861 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
BDNF-215ENST00000530861 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.22
BDNF-215ENST00000530861 NUTM2GQ5VZR2 741 aa16.39■□□□□ 0.22
BDNF-215ENST00000530861 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.22
BDNF-215ENST00000530861 PPP2R1AP30153 589 aa16.39■□□□□ 0.21
BDNF-215ENST00000530861 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
BDNF-215ENST00000530861 RPRD2Q5VT52 1461 aaKnown RBP16.39■□□□□ 0.21
BDNF-215ENST00000530861 HMOX1P09601 288 aa16.39■□□□□ 0.21
BDNF-215ENST00000530861 MTHFSP49914 203 aa16.39■□□□□ 0.21
BDNF-215ENST00000530861 BCAR3O75815 825 aa16.38■□□□□ 0.21
BDNF-215ENST00000530861 CTTNBP2Q8WZ74 1663 aa16.38■□□□□ 0.21
BDNF-215ENST00000530861 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
BDNF-215ENST00000530861 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
BDNF-215ENST00000530861 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
BDNF-215ENST00000530861 ADAMTS12P58397 1594 aa16.37■□□□□ 0.21
BDNF-215ENST00000530861 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
BDNF-215ENST00000530861 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
BDNF-215ENST00000530861 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
BDNF-215ENST00000530861 A0A0G2JS52 829 aa16.36■□□□□ 0.21
BDNF-215ENST00000530861 WAPLQ7Z5K2 1190 aa16.36■□□□□ 0.21
BDNF-215ENST00000530861 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
BDNF-215ENST00000530861 WDR62O43379 1518 aa16.35■□□□□ 0.21
BDNF-215ENST00000530861 CENPJQ9HC77 1338 aaPredicted RBP16.35■□□□□ 0.21
BDNF-215ENST00000530861 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
BDNF-215ENST00000530861 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
BDNF-215ENST00000530861 PRAM1Q96QH2 718 aa16.34■□□□□ 0.21
BDNF-215ENST00000530861 KIF14Q15058 1648 aa16.33■□□□□ 0.21
BDNF-215ENST00000530861 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.21
BDNF-215ENST00000530861 TPRNQ4KMQ1 711 aa16.33■□□□□ 0.21
BDNF-215ENST00000530861 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.21
BDNF-215ENST00000530861 RAPGEF6Q8TEU7 1601 aa16.32■□□□□ 0.2
BDNF-215ENST00000530861 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
BDNF-215ENST00000530861 KIAA0556O60303 1618 aa16.32■□□□□ 0.2
BDNF-215ENST00000530861 IDI1Q13907 227 aa16.31■□□□□ 0.2
BDNF-215ENST00000530861 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
BDNF-215ENST00000530861 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
BDNF-215ENST00000530861 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
BDNF-215ENST00000530861 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
BDNF-215ENST00000530861 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
BDNF-215ENST00000530861 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
BDNF-215ENST00000530861 PZPP20742 1482 aa16.29■□□□□ 0.2
BDNF-215ENST00000530861 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms