RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
USP35-207ENST00000530546 BCANQ96GW7 911 aa15.89■□□□□ 0.13
USP35-207ENST00000530546 MAST1Q9Y2H9 1570 aa15.89■□□□□ 0.13
USP35-207ENST00000530546 CCDC144AA2RUR9 1427 aa15.88■□□□□ 0.13
USP35-207ENST00000530546 NEFLP07196 543 aa15.88■□□□□ 0.13
USP35-207ENST00000530546 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
USP35-207ENST00000530546 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
USP35-207ENST00000530546 CCDC184Q52MB2 194 aa15.87■□□□□ 0.13
USP35-207ENST00000530546 WDR7Q9Y4E6 1490 aa15.86■□□□□ 0.13
USP35-207ENST00000530546 ABCC1P33527 1531 aa15.86■□□□□ 0.13
USP35-207ENST00000530546 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
USP35-207ENST00000530546 DUOX2Q9NRD8 1548 aa15.85■□□□□ 0.13
USP35-207ENST00000530546 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
USP35-207ENST00000530546 PLXNC1O60486 1568 aa15.84■□□□□ 0.13
USP35-207ENST00000530546 MSH5O43196 834 aa15.84■□□□□ 0.13
USP35-207ENST00000530546 UHRF1BP1Q6BDS2 1440 aa15.84■□□□□ 0.13
USP35-207ENST00000530546 ST20-MTHFSA0A0A6YYL1 179 aa15.83■□□□□ 0.12
USP35-207ENST00000530546 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
USP35-207ENST00000530546 PLA2R1Q13018 1463 aa15.83■□□□□ 0.12
USP35-207ENST00000530546 UNC13BO14795 1591 aa15.82■□□□□ 0.12
USP35-207ENST00000530546 RALGAPBQ86X10 1494 aa15.82■□□□□ 0.12
USP35-207ENST00000530546 ASXL2Q76L83 1435 aa15.82■□□□□ 0.12
USP35-207ENST00000530546 ROCK2O75116 1388 aaKnown RBP15.82■□□□□ 0.12
USP35-207ENST00000530546 FAM9BQ8IZU0 186 aa15.81■□□□□ 0.12
USP35-207ENST00000530546 ERBINQ96RT1 1412 aa15.81■□□□□ 0.12
USP35-207ENST00000530546 FANCAO15360 1455 aa15.81■□□□□ 0.12
USP35-207ENST00000530546 MRS2Q9HD23 443 aa15.81■□□□□ 0.12
USP35-207ENST00000530546 NBPF1Q3BBV0 1214 aa15.8■□□□□ 0.12
USP35-207ENST00000530546 BCORL1Q5H9F3 1711 aa15.79■□□□□ 0.12
USP35-207ENST00000530546 KDM5CP41229 1560 aa15.79■□□□□ 0.12
USP35-207ENST00000530546 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
USP35-207ENST00000530546 IQGAP3Q86VI3 1631 aa15.77■□□□□ 0.12
USP35-207ENST00000530546 KIF3BO15066 747 aa15.77■□□□□ 0.12
USP35-207ENST00000530546 ADGRL1O94910 1474 aa15.76■□□□□ 0.11
USP35-207ENST00000530546 PRAG1Q86YV5 1406 aa15.75■□□□□ 0.11
USP35-207ENST00000530546 A2MP01023 1474 aa15.75■□□□□ 0.11
USP35-207ENST00000530546 ZFYVE16Q7Z3T8 1539 aa15.75■□□□□ 0.11
USP35-207ENST00000530546 RTEL1-TNFRSF6BF6WH68 1400 aa15.74■□□□□ 0.11
USP35-207ENST00000530546 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
USP35-207ENST00000530546 MAGI2Q86UL8 1455 aa15.73■□□□□ 0.11
USP35-207ENST00000530546 DHX29Q7Z478 1369 aaKnown RBP15.73■□□□□ 0.11
USP35-207ENST00000530546 ABCA9Q8IUA7 1624 aa15.72■□□□□ 0.11
USP35-207ENST00000530546 POLR1AO95602 1720 aaPredicted RBP15.72■□□□□ 0.11
USP35-207ENST00000530546 ATP7AQ04656 1500 aa15.71■□□□□ 0.11
USP35-207ENST00000530546 ARID4BQ4LE39 1312 aaPredicted RBP15.71■□□□□ 0.11
USP35-207ENST00000530546 DNAJC5Q9H3Z4 198 aa15.71■□□□□ 0.11
USP35-207ENST00000530546 KANK1Q14678 1352 aa15.69■□□□□ 0.1
USP35-207ENST00000530546 SENP3-EIF4A1A0A087X0R7 540 aa15.68■□□□□ 0.1
USP35-207ENST00000530546 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
USP35-207ENST00000530546 ATP10AO60312 1499 aa15.67■□□□□ 0.1
USP35-207ENST00000530546 TRPM1Q7Z4N2 1603 aa15.67■□□□□ 0.1
USP35-207ENST00000530546 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
USP35-207ENST00000530546 INO80Q9ULG1 1556 aaPredicted RBP15.65■□□□□ 0.1
USP35-207ENST00000530546 E9PCH4 1651 aa15.65■□□□□ 0.1
USP35-207ENST00000530546 IRX6P78412 446 aaPredicted RBP15.63■□□□□ 0.09
USP35-207ENST00000530546 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
USP35-207ENST00000530546 GGT6Q6P531 493 aa15.63■□□□□ 0.09
USP35-207ENST00000530546 GPRASP1Q5JY77 1395 aa15.63■□□□□ 0.09
USP35-207ENST00000530546 TMC1Q8TDI8 760 aa15.62■□□□□ 0.09
USP35-207ENST00000530546 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
USP35-207ENST00000530546 TESK2Q96S53 571 aa15.61■□□□□ 0.09
USP35-207ENST00000530546 DISP3Q9P2K9 1392 aa15.61■□□□□ 0.09
USP35-207ENST00000530546 RAPGEF3O95398 923 aa15.61■□□□□ 0.09
USP35-207ENST00000530546 ZNF518AQ6AHZ1 1483 aa15.6■□□□□ 0.09
USP35-207ENST00000530546 TRPM2O94759 1503 aa15.6■□□□□ 0.09
USP35-207ENST00000530546 CHGAP10645 457 aaKnown RBP15.6■□□□□ 0.09
USP35-207ENST00000530546 PTPRTO14522 1441 aa15.6■□□□□ 0.09
USP35-207ENST00000530546 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
USP35-207ENST00000530546 TMF1P82094 1093 aa15.59■□□□□ 0.09
USP35-207ENST00000530546 CLTCL1P53675 1640 aa15.59■□□□□ 0.09
USP35-207ENST00000530546 KIDINS220Q9ULH0 1771 aa15.58■□□□□ 0.08
USP35-207ENST00000530546 EIF2AK4Q9P2K8 1649 aaKnown RBP15.58■□□□□ 0.08
USP35-207ENST00000530546 UGGT1Q9NYU2 1555 aa15.57■□□□□ 0.08
USP35-207ENST00000530546 TET3O43151 1660 aa15.57■□□□□ 0.08
USP35-207ENST00000530546 PRDM15P57071 1507 aaPredicted RBP15.57■□□□□ 0.08
USP35-207ENST00000530546 ZBED9Q6R2W3 1325 aa15.57■□□□□ 0.08
USP35-207ENST00000530546 SPHKAPQ2M3C7 1700 aa15.57■□□□□ 0.08
USP35-207ENST00000530546 CC2D1BQ5T0F9 858 aaKnown RBP15.57■□□□□ 0.08
USP35-207ENST00000530546 PANK3Q9H999 370 aa15.56■□□□□ 0.08
USP35-207ENST00000530546 POGZQ7Z3K3 1410 aa15.56■□□□□ 0.08
USP35-207ENST00000530546 VWDEQ8N2E2 1590 aa15.55■□□□□ 0.08
USP35-207ENST00000530546 MROH1Q8NDA8 1641 aa15.55■□□□□ 0.08
USP35-207ENST00000530546 RALBP1Q15311 655 aa15.55■□□□□ 0.08
USP35-207ENST00000530546 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
USP35-207ENST00000530546 COL17A1Q9UMD9 1497 aaPredicted RBP15.55■□□□□ 0.08
USP35-207ENST00000530546 MYBBP1AQ9BQG0 1328 aaKnown RBP15.55■□□□□ 0.08
USP35-207ENST00000530546 CFAP70Q5T0N1 1121 aa15.54■□□□□ 0.08
USP35-207ENST00000530546 KTN1Q86UP2 1357 aaKnown RBP15.53■□□□□ 0.08
USP35-207ENST00000530546 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
USP35-207ENST00000530546 MADDQ8WXG6 1647 aa15.53■□□□□ 0.08
USP35-207ENST00000530546 PER1O15534 1290 aaPredicted RBP15.52■□□□□ 0.08
USP35-207ENST00000530546 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
USP35-207ENST00000530546 CEP152O94986 1710 aa15.52■□□□□ 0.07
USP35-207ENST00000530546 LAMC1P11047 1609 aa15.51■□□□□ 0.07
USP35-207ENST00000530546 EFCAB6Q5THR3 1501 aa15.5■□□□□ 0.07
USP35-207ENST00000530546 MLH3Q9UHC1 1453 aa15.5■□□□□ 0.07
USP35-207ENST00000530546 STAC3Q96MF2 364 aa15.49■□□□□ 0.07
USP35-207ENST00000530546 ANO8Q9HCE9 1232 aaPredicted RBP15.49■□□□□ 0.07
USP35-207ENST00000530546 SALL2Q9Y467 1007 aaPredicted RBP15.49■□□□□ 0.07
USP35-207ENST00000530546 CFAP74Q9C0B2 1584 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms