RNA–Protein interactions for RNA: ENST00000530369.1

USP47-210, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-210ENST00000530369 MLLT3P42568 568 aaPredicted RBP8.15□□□□□ -1.1
USP47-210ENST00000530369 EN1Q05925 392 aaPredicted RBP8.15□□□□□ -1.1
USP47-210ENST00000530369 NISCHQ9Y2I1 1504 aa8.13□□□□□ -1.11
USP47-210ENST00000530369 CERKQ8TCT0 537 aa8.13□□□□□ -1.11
USP47-210ENST00000530369 RBM33Q96EV2 1170 aaKnown RBP8.13□□□□□ -1.11
USP47-210ENST00000530369 ARHGAP33O14559 1287 aa8.12□□□□□ -1.11
USP47-210ENST00000530369 OSBPP22059 807 aa8.12□□□□□ -1.11
USP47-210ENST00000530369 KCNK17Q96T54 332 aa8.12□□□□□ -1.11
USP47-210ENST00000530369 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
USP47-210ENST00000530369 NUTM2FA1L443 756 aa8.1□□□□□ -1.11
USP47-210ENST00000530369 PPP1R3GB7ZBB8 358 aa8.1□□□□□ -1.11
USP47-210ENST00000530369 C6orf132Q5T0Z8 1188 aa8.1□□□□□ -1.11
USP47-210ENST00000530369 GPIHBP1Q8IV16 184 aa8.09□□□□□ -1.11
USP47-210ENST00000530369 FCHSD2O94868 740 aa8.07□□□□□ -1.12
USP47-210ENST00000530369 LMOD2Q6P5Q4 547 aa8.07□□□□□ -1.12
USP47-210ENST00000530369 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP47-210ENST00000530369 TSR1Q2NL82 804 aaKnown RBP8.05□□□□□ -1.12
USP47-210ENST00000530369 RBM26Q5T8P6 1007 aaKnown RBP8.05□□□□□ -1.12
USP47-210ENST00000530369 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP47-210ENST00000530369 RBM27Q9P2N5 1060 aaKnown RBP8.05□□□□□ -1.12
USP47-210ENST00000530369 TK2O00142 265 aa8.04□□□□□ -1.12
USP47-210ENST00000530369 PSEN2P49810 448 aa8.04□□□□□ -1.12
USP47-210ENST00000530369 STAC3Q96MF2 364 aa8.04□□□□□ -1.12
USP47-210ENST00000530369 AXIN2Q9Y2T1 843 aa8.04□□□□□ -1.12
USP47-210ENST00000530369 HIC1Q14526 733 aa8.03□□□□□ -1.12
USP47-210ENST00000530369 SLC4A5Q9BY07 1137 aa8.03□□□□□ -1.12
USP47-210ENST00000530369 ONECUT3O60422 494 aaPredicted RBP8.02□□□□□ -1.13
USP47-210ENST00000530369 RNF166Q96A37 237 aaPredicted RBP8.02□□□□□ -1.13
USP47-210ENST00000530369 NBPF3Q9H094 633 aa8.02□□□□□ -1.13
USP47-210ENST00000530369 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
USP47-210ENST00000530369 PRSS12P56730 875 aa8.01□□□□□ -1.13
USP47-210ENST00000530369 PTGDRQ13258 359 aa8.01□□□□□ -1.13
USP47-210ENST00000530369 ANKRD13DQ6ZTN6 518 aa8.01□□□□□ -1.13
USP47-210ENST00000530369 PACS2Q86VP3 889 aa8.01□□□□□ -1.13
USP47-210ENST00000530369 ZBED2Q9BTP6 218 aa8.01□□□□□ -1.13
USP47-210ENST00000530369 CDHR5Q9HBB8 845 aa8.01□□□□□ -1.13
USP47-210ENST00000530369 TRIM6-TRIM34B2RNG4 842 aa8□□□□□ -1.13
USP47-210ENST00000530369 NBPF26B4DH59 902 aa8□□□□□ -1.13
USP47-210ENST00000530369 COL9A1P20849 921 aa8□□□□□ -1.13
USP47-210ENST00000530369 GNPATO15228 680 aa7.99□□□□□ -1.13
USP47-210ENST00000530369 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
USP47-210ENST00000530369 ADGRD1Q6QNK2 874 aa7.99□□□□□ -1.13
USP47-210ENST00000530369 POTEEQ6S8J3 1075 aa7.99□□□□□ -1.13
USP47-210ENST00000530369 CDCA7LQ96GN5 454 aa7.99□□□□□ -1.13
USP47-210ENST00000530369 RABGEF1Q9UJ41 708 aa7.98□□□□□ -1.13
USP47-210ENST00000530369 VPS9D1Q9Y2B5 631 aa7.98□□□□□ -1.13
USP47-210ENST00000530369 MYT1LQ9UL68 1186 aa7.97□□□□□ -1.13
USP47-210ENST00000530369 PROX2Q3B8N5 592 aa7.96□□□□□ -1.14
USP47-210ENST00000530369 PADI6Q6TGC4 694 aa7.96□□□□□ -1.14
USP47-210ENST00000530369 NPDC1Q9NQX5 325 aaPredicted RBP7.96□□□□□ -1.14
USP47-210ENST00000530369 GOLGA8CPA6NN73 597 aa7.95□□□□□ -1.14
USP47-210ENST00000530369 MRPL50Q8N5N7 158 aaKnown RBP7.95□□□□□ -1.14
USP47-210ENST00000530369 LAPTM4BQ86VI4 370 aa7.94□□□□□ -1.14
USP47-210ENST00000530369 RBM46Q8TBY0 533 aaKnown RBP7.94□□□□□ -1.14
USP47-210ENST00000530369 ZC3H15Q8WU90 426 aaKnown RBP7.94□□□□□ -1.14
USP47-210ENST00000530369 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
USP47-210ENST00000530369 GPR37O15354 613 aa7.93□□□□□ -1.14
USP47-210ENST00000530369 OATP04181 439 aa7.93□□□□□ -1.14
USP47-210ENST00000530369 SLC4A3P48751 1232 aa7.93□□□□□ -1.14
USP47-210ENST00000530369 MAP2K5Q13163 448 aa7.93□□□□□ -1.14
USP47-210ENST00000530369 KRI1Q8N9T8 703 aaKnown RBP7.93□□□□□ -1.14
USP47-210ENST00000530369 HDGFP51858 240 aaKnown RBP7.92□□□□□ -1.14
USP47-210ENST00000530369 TTC13Q8NBP0 860 aa7.92□□□□□ -1.14
USP47-210ENST00000530369 TSKSQ9UJT2 592 aa7.92□□□□□ -1.14
USP47-210ENST00000530369 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
USP47-210ENST00000530369 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
USP47-210ENST00000530369 FAM98CQ17RN3 349 aaKnown RBP7.91□□□□□ -1.14
USP47-210ENST00000530369 TATDN2Q93075 761 aa7.91□□□□□ -1.14
USP47-210ENST00000530369 HRO43593 1189 aa7.9□□□□□ -1.14
USP47-210ENST00000530369 ZMYND10O75800 440 aa7.9□□□□□ -1.14
USP47-210ENST00000530369 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
USP47-210ENST00000530369 NUDT18Q6ZVK8 323 aa7.89□□□□□ -1.15
USP47-210ENST00000530369 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
USP47-210ENST00000530369 ANKK1Q8NFD2 765 aa7.88□□□□□ -1.15
USP47-210ENST00000530369 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
USP47-210ENST00000530369 SEPT9Q9UHD8 586 aaPredicted RBP7.88□□□□□ -1.15
USP47-210ENST00000530369 ADGRG1Q9Y653 693 aa7.88□□□□□ -1.15
USP47-210ENST00000530369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.87□□□□□ -1.15
USP47-210ENST00000530369 DNAJB2P25686 324 aa7.87□□□□□ -1.15
USP47-210ENST00000530369 IRF6O14896 467 aa7.86□□□□□ -1.15
USP47-210ENST00000530369 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
USP47-210ENST00000530369 METTL3Q86U44 580 aaKnown RBP7.85□□□□□ -1.15
USP47-210ENST00000530369 WNT2BQ93097 391 aa7.85□□□□□ -1.15
USP47-210ENST00000530369 CCDC102AQ96A19 550 aa7.85□□□□□ -1.15
USP47-210ENST00000530369 LRCH3Q96II8 777 aa7.85□□□□□ -1.15
USP47-210ENST00000530369 ZFRQ96KR1 1074 aaKnown RBP7.85□□□□□ -1.15
USP47-210ENST00000530369 SMAPO00193 183 aa7.84□□□□□ -1.15
USP47-210ENST00000530369 FECHP22830 423 aa7.84□□□□□ -1.15
USP47-210ENST00000530369 TPRNQ4KMQ1 711 aa7.84□□□□□ -1.15
USP47-210ENST00000530369 RSPH4AQ5TD94 716 aa7.84□□□□□ -1.15
USP47-210ENST00000530369 PXYLP1Q8TE99 480 aa7.84□□□□□ -1.15
USP47-210ENST00000530369 AK7Q96M32 723 aa7.84□□□□□ -1.15
USP47-210ENST00000530369 SLF2Q8IX21 1173 aa7.83□□□□□ -1.16
USP47-210ENST00000530369 EYA1Q99502 592 aa7.83□□□□□ -1.16
USP47-210ENST00000530369 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.83□□□□□ -1.16
USP47-210ENST00000530369 RCCD1A6NED2 376 aa7.81□□□□□ -1.16
USP47-210ENST00000530369 KCTD12Q96CX2 325 aaKnown RBP7.81□□□□□ -1.16
USP47-210ENST00000530369 RNF40O75150 1001 aa7.8□□□□□ -1.16
USP47-210ENST00000530369 CLCN1P35523 988 aa7.8□□□□□ -1.16
USP47-210ENST00000530369 FAM161AQ3B820 660 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms