RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRIM49D1-202ENST00000530311 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
TRIM49D1-202ENST00000530311 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
TRIM49D1-202ENST00000530311 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
TRIM49D1-202ENST00000530311 PTPRGP23470 1445 aa12.48□□□□□ -0.41
TRIM49D1-202ENST00000530311 KDM5DQ9BY66 1539 aa12.46□□□□□ -0.41
TRIM49D1-202ENST00000530311 ARHGEF12Q9NZN5 1544 aa12.46□□□□□ -0.41
TRIM49D1-202ENST00000530311 MYBBP1AQ9BQG0 1328 aaKnown RBP12.46□□□□□ -0.42
TRIM49D1-202ENST00000530311 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
TRIM49D1-202ENST00000530311 CCDC136Q96JN2 1154 aa12.45□□□□□ -0.42
TRIM49D1-202ENST00000530311 LRPPRCP42704 1394 aaKnown RBP12.44□□□□□ -0.42
TRIM49D1-202ENST00000530311 RALBP1Q15311 655 aa12.44□□□□□ -0.42
TRIM49D1-202ENST00000530311 FAM135AQ9P2D6 1515 aa12.44□□□□□ -0.42
TRIM49D1-202ENST00000530311 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
TRIM49D1-202ENST00000530311 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
TRIM49D1-202ENST00000530311 CCDC141Q6ZP82 1450 aa12.43□□□□□ -0.42
TRIM49D1-202ENST00000530311 ARHGEF5Q12774 1597 aa12.43□□□□□ -0.42
TRIM49D1-202ENST00000530311 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
TRIM49D1-202ENST00000530311 PLA2R1Q13018 1463 aa12.42□□□□□ -0.42
TRIM49D1-202ENST00000530311 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
TRIM49D1-202ENST00000530311 PRAG1Q86YV5 1406 aa12.42□□□□□ -0.42
TRIM49D1-202ENST00000530311 CCDC144AA2RUR9 1427 aa12.41□□□□□ -0.42
TRIM49D1-202ENST00000530311 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
TRIM49D1-202ENST00000530311 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
TRIM49D1-202ENST00000530311 PREX2Q70Z35 1606 aa12.41□□□□□ -0.42
TRIM49D1-202ENST00000530311 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
TRIM49D1-202ENST00000530311 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
TRIM49D1-202ENST00000530311 RSPH4AQ5TD94 716 aa12.39□□□□□ -0.43
TRIM49D1-202ENST00000530311 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
TRIM49D1-202ENST00000530311 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
TRIM49D1-202ENST00000530311 EXOC6Q8TAG9 804 aa12.39□□□□□ -0.43
TRIM49D1-202ENST00000530311 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
TRIM49D1-202ENST00000530311 TESK2Q96S53 571 aa12.39□□□□□ -0.43
TRIM49D1-202ENST00000530311 PLEKHH2Q8IVE3 1493 aa12.38□□□□□ -0.43
TRIM49D1-202ENST00000530311 DISP3Q9P2K9 1392 aa12.38□□□□□ -0.43
TRIM49D1-202ENST00000530311 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
TRIM49D1-202ENST00000530311 A2MP01023 1474 aa12.38□□□□□ -0.43
TRIM49D1-202ENST00000530311 KTN1Q86UP2 1357 aaKnown RBP12.38□□□□□ -0.43
TRIM49D1-202ENST00000530311 PARD3Q8TEW0 1356 aa12.38□□□□□ -0.43
TRIM49D1-202ENST00000530311 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
TRIM49D1-202ENST00000530311 PANK3Q9H999 370 aa12.37□□□□□ -0.43
TRIM49D1-202ENST00000530311 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
TRIM49D1-202ENST00000530311 E9PCH4 1651 aa12.37□□□□□ -0.43
TRIM49D1-202ENST00000530311 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
TRIM49D1-202ENST00000530311 BCL11AQ9H165 835 aa12.36□□□□□ -0.43
TRIM49D1-202ENST00000530311 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
TRIM49D1-202ENST00000530311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIM49D1-202ENST00000530311 GPRASP1Q5JY77 1395 aa12.34□□□□□ -0.43
TRIM49D1-202ENST00000530311 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
TRIM49D1-202ENST00000530311 PLIN1O60240 522 aa12.33□□□□□ -0.44
TRIM49D1-202ENST00000530311 ABCC2Q92887 1545 aa12.32□□□□□ -0.44
TRIM49D1-202ENST00000530311 ERBINQ96RT1 1412 aa12.32□□□□□ -0.44
TRIM49D1-202ENST00000530311 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
TRIM49D1-202ENST00000530311 UNC13BO14795 1591 aa12.31□□□□□ -0.44
TRIM49D1-202ENST00000530311 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
TRIM49D1-202ENST00000530311 TMF1P82094 1093 aa12.3□□□□□ -0.44
TRIM49D1-202ENST00000530311 NBR1Q14596 966 aa12.3□□□□□ -0.44
TRIM49D1-202ENST00000530311 PRDM15P57071 1507 aaPredicted RBP12.3□□□□□ -0.44
TRIM49D1-202ENST00000530311 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
TRIM49D1-202ENST00000530311 PDE3BQ13370 1112 aa12.29□□□□□ -0.44
TRIM49D1-202ENST00000530311 CLASP1Q7Z460 1538 aa12.29□□□□□ -0.44
TRIM49D1-202ENST00000530311 SKAP1Q86WV1 359 aa12.28□□□□□ -0.44
TRIM49D1-202ENST00000530311 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
TRIM49D1-202ENST00000530311 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
TRIM49D1-202ENST00000530311 ZCCHC11Q5TAX3 1644 aaKnown RBP12.28□□□□□ -0.44
TRIM49D1-202ENST00000530311 IQGAP3Q86VI3 1631 aa12.28□□□□□ -0.44
TRIM49D1-202ENST00000530311 ANP32AP39687 249 aaKnown RBP12.28□□□□□ -0.44
TRIM49D1-202ENST00000530311 WASHC2CQ9Y4E1 1318 aa12.27□□□□□ -0.44
TRIM49D1-202ENST00000530311 AFAP1Q8N556 730 aa12.27□□□□□ -0.45
TRIM49D1-202ENST00000530311 TRAPPC8Q9Y2L5 1435 aa12.27□□□□□ -0.45
TRIM49D1-202ENST00000530311 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
TRIM49D1-202ENST00000530311 NPM2Q86SE8 214 aaKnown RBP12.26□□□□□ -0.45
TRIM49D1-202ENST00000530311 DUOX2Q9NRD8 1548 aa12.26□□□□□ -0.45
TRIM49D1-202ENST00000530311 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
TRIM49D1-202ENST00000530311 ATP10AO60312 1499 aa12.25□□□□□ -0.45
TRIM49D1-202ENST00000530311 MAGI2Q86UL8 1455 aa12.25□□□□□ -0.45
TRIM49D1-202ENST00000530311 PLCH2O75038 1416 aa12.25□□□□□ -0.45
TRIM49D1-202ENST00000530311 CRBNQ96SW2 442 aa12.25□□□□□ -0.45
TRIM49D1-202ENST00000530311 BLMP54132 1417 aaPredicted RBP12.25□□□□□ -0.45
TRIM49D1-202ENST00000530311 C20orf194Q5TEA3 1177 aa12.24□□□□□ -0.45
TRIM49D1-202ENST00000530311 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
TRIM49D1-202ENST00000530311 LAMC1P11047 1609 aa12.24□□□□□ -0.45
TRIM49D1-202ENST00000530311 PDE4AP27815 886 aa12.23□□□□□ -0.45
TRIM49D1-202ENST00000530311 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
TRIM49D1-202ENST00000530311 DEKP35659 375 aaKnown RBP12.23□□□□□ -0.45
TRIM49D1-202ENST00000530311 KNSTRNQ9Y448 316 aa12.23□□□□□ -0.45
TRIM49D1-202ENST00000530311 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
TRIM49D1-202ENST00000530311 SPAG9O60271 1321 aaKnown RBP12.22□□□□□ -0.45
TRIM49D1-202ENST00000530311 TCERG1O14776 1098 aaKnown RBP12.22□□□□□ -0.45
TRIM49D1-202ENST00000530311 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
TRIM49D1-202ENST00000530311 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
TRIM49D1-202ENST00000530311 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.46
TRIM49D1-202ENST00000530311 BACH2Q9BYV9 841 aa12.2□□□□□ -0.46
TRIM49D1-202ENST00000530311 ABCC1P33527 1531 aa12.2□□□□□ -0.46
TRIM49D1-202ENST00000530311 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRIM49D1-202ENST00000530311 UHRF1BP1LA0JNW5 1464 aa12.19□□□□□ -0.46
TRIM49D1-202ENST00000530311 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
TRIM49D1-202ENST00000530311 RNF17Q9BXT8 1623 aaKnown RBP12.18□□□□□ -0.46
TRIM49D1-202ENST00000530311 INSRP06213 1382 aa12.18□□□□□ -0.46
TRIM49D1-202ENST00000530311 DUSP27Q5VZP5 1158 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms