RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 ARAP1Q96P48 1450 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 PRXQ9BXM0 1461 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 PHLDB1Q86UU1 1377 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 TERF2IPQ9NYB0 399 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 NAP1L2Q9ULW6 460 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-225ENST00000530094 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
CTNND1-225ENST00000530094 LRRC9Q6ZRR7 1453 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 PEG3Q9GZU2 1588 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 CCER2I3L3R5 266 aa10.73□□□□□ -0.69
CTNND1-225ENST00000530094 MAGI1Q96QZ7 1491 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-225ENST00000530094 TULP1O00294 542 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-225ENST00000530094 PTMSP20962 102 aa10.72□□□□□ -0.69
CTNND1-225ENST00000530094 GRIN2AQ12879 1464 aa10.72□□□□□ -0.69
CTNND1-225ENST00000530094 SCAPERQ9BY12 1400 aa10.72□□□□□ -0.69
CTNND1-225ENST00000530094 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-225ENST00000530094 ERICH6BQ5W0A0 696 aa10.71□□□□□ -0.69
CTNND1-225ENST00000530094 LTV1Q96GA3 475 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-225ENST00000530094 FYCO1Q9BQS8 1478 aa10.71□□□□□ -0.7
CTNND1-225ENST00000530094 RALBP1Q15311 655 aa10.71□□□□□ -0.7
CTNND1-225ENST00000530094 RGS3P49796 1198 aa10.7□□□□□ -0.7
CTNND1-225ENST00000530094 EFCAB5A4FU69 1503 aa10.7□□□□□ -0.7
CTNND1-225ENST00000530094 IQGAP2Q13576 1575 aa10.7□□□□□ -0.7
CTNND1-225ENST00000530094 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
CTNND1-225ENST00000530094 ANKRD50Q9ULJ7 1429 aa10.69□□□□□ -0.7
CTNND1-225ENST00000530094 HTATSF1O43719 755 aaKnown RBP10.69□□□□□ -0.7
CTNND1-225ENST00000530094 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTNND1-225ENST00000530094 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-225ENST00000530094 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.72e-10■■□□□ 12.3
CTNND1-225ENST00000530094 AMPHP49418 695 aa10.68□□□□□ -0.7
CTNND1-225ENST00000530094 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-225ENST00000530094 GNL2Q13823 731 aaKnown RBP10.68□□□□□ -0.7
CTNND1-225ENST00000530094 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
CTNND1-225ENST00000530094 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-225ENST00000530094 LMOD3Q0VAK6 560 aa10.68□□□□□ -0.7
CTNND1-225ENST00000530094 ST20-MTHFSA0A0A6YYL1 179 aa10.67□□□□□ -0.7
CTNND1-225ENST00000530094 STK31Q9BXU1 1019 aa10.66□□□□□ -0.7
CTNND1-225ENST00000530094 CHAF1AQ13111 956 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-225ENST00000530094 CDK13Q14004 1512 aaKnown RBP10.66□□□□□ -0.7
CTNND1-225ENST00000530094 PLB1Q6P1J6 1458 aa10.66□□□□□ -0.7
CTNND1-225ENST00000530094 TXNDC2Q86VQ3 553 aa10.66□□□□□ -0.7
CTNND1-225ENST00000530094 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
CTNND1-225ENST00000530094 ISY1Q9ULR0 285 aaKnown RBP10.66□□□□□ -0.7
CTNND1-225ENST00000530094 RWDD1Q9H446 243 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-225ENST00000530094 CD109Q6YHK3 1445 aa10.65□□□□□ -0.7
CTNND1-225ENST00000530094 ATF3P18847 181 aa10.65□□□□□ -0.7
CTNND1-225ENST00000530094 PLCB2Q00722 1185 aa10.65□□□□□ -0.71
CTNND1-225ENST00000530094 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
CTNND1-225ENST00000530094 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
CTNND1-225ENST00000530094 CCDC34Q96HJ3 373 aa10.64□□□□□ -0.71
CTNND1-225ENST00000530094 CLSTN1O94985 981 aa10.64□□□□□ -0.71
CTNND1-225ENST00000530094 EVC2Q86UK5 1308 aa10.64□□□□□ -0.71
CTNND1-225ENST00000530094 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
CTNND1-225ENST00000530094 CUL7Q14999 1698 aa10.64□□□□□ -0.71
CTNND1-225ENST00000530094 HMMRO75330 724 aa10.64□□□□□ -0.71
CTNND1-225ENST00000530094 EVA1CP58658 441 aa10.63□□□□□ -0.71
CTNND1-225ENST00000530094 PSME1Q06323 249 aa10.63□□□□□ -0.71
CTNND1-225ENST00000530094 TMEM132EQ6IEE7 984 aa10.63□□□□□ -0.71
CTNND1-225ENST00000530094 NOP58Q9Y2X3 529 aaKnown RBP10.63□□□□□ -0.71
CTNND1-225ENST00000530094 PMFBP1Q8TBY8 1022 aa10.62□□□□□ -0.71
CTNND1-225ENST00000530094 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
CTNND1-225ENST00000530094 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
CTNND1-225ENST00000530094 C9orf84Q5VXU9 1444 aa10.62□□□□□ -0.71
CTNND1-225ENST00000530094 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
CTNND1-225ENST00000530094 EHBP1L1Q8N3D4 1523 aa10.62□□□□□ -0.71
CTNND1-225ENST00000530094 GORABQ5T7V8 394 aa10.62□□□□□ -0.71
CTNND1-225ENST00000530094 POGZQ7Z3K3 1410 aa10.61□□□□□ -0.71
CTNND1-225ENST00000530094 TAF7LQ5H9L4 462 aa10.61□□□□□ -0.71
CTNND1-225ENST00000530094 ARHGEF11O15085 1522 aa10.61□□□□□ -0.71
CTNND1-225ENST00000530094 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-225ENST00000530094 EPRSP07814 1512 aaKnown RBP10.61□□□□□ -0.71
CTNND1-225ENST00000530094 PROSER2Q86WR7 435 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-225ENST00000530094 COG3Q96JB2 828 aa10.6□□□□□ -0.71
CTNND1-225ENST00000530094 TPM4P67936 248 aa10.6□□□□□ -0.71
CTNND1-225ENST00000530094 GBP4Q96PP9 640 aa10.6□□□□□ -0.71
CTNND1-225ENST00000530094 G3V3G9 751 aa10.59□□□□□ -0.71
CTNND1-225ENST00000530094 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
CTNND1-225ENST00000530094 PANK3Q9H999 370 aa10.59□□□□□ -0.71
CTNND1-225ENST00000530094 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
CTNND1-225ENST00000530094 ITPRIPQ8IWB1 547 aa10.59□□□□□ -0.71
CTNND1-225ENST00000530094 SYAP1Q96A49 352 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-225ENST00000530094 CHMP4CQ96CF2 233 aa10.59□□□□□ -0.71
CTNND1-225ENST00000530094 DRC7Q8IY82 874 aa10.58□□□□□ -0.72
CTNND1-225ENST00000530094 MSNP26038 577 aaKnown RBP10.57□□□□□ -0.72
CTNND1-225ENST00000530094 USP47Q96K76 1375 aa10.57□□□□□ -0.72
CTNND1-225ENST00000530094 NUTM2GQ5VZR2 741 aa10.57□□□□□ -0.72
CTNND1-225ENST00000530094 CENPJQ9HC77 1338 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-225ENST00000530094 PDE3BQ13370 1112 aa10.56□□□□□ -0.72
CTNND1-225ENST00000530094 CCDC146Q8IYE0 955 aa10.56□□□□□ -0.72
CTNND1-225ENST00000530094 SLC26A8Q96RN1 970 aa10.56□□□□□ -0.72
CTNND1-225ENST00000530094 CFAP70Q5T0N1 1121 aa10.56□□□□□ -0.72
CTNND1-225ENST00000530094 ANKLE2Q86XL3 938 aa10.56□□□□□ -0.72
CTNND1-225ENST00000530094 RCAN3Q9UKA8 241 aa10.56□□□□□ -0.72
CTNND1-225ENST00000530094 KIF3AQ9Y496 699 aa10.55□□□□□ -0.72
CTNND1-225ENST00000530094 MIA2Q96PC5 1412 aa10.55□□□□□ -0.72
CTNND1-225ENST00000530094 KIF21AQ7Z4S6 1674 aa10.55□□□□□ -0.72
CTNND1-225ENST00000530094 NAP1L5Q96NT1 182 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-225ENST00000530094 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
CTNND1-225ENST00000530094 CGNL1Q0VF96 1302 aa10.55□□□□□ -0.72
CTNND1-225ENST00000530094 CABP2Q9NPB3 220 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms