RNA–Protein interactions for RNA: ENST00000529947.1

UBTF-210, Transcript of upstream binding transcription factor, humanhuman

TSL 3

Gene UBTF, Length 685 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-210ENST00000529947 CDC42BPAQ5VT25 1732 aa12.12□□□□□ -0.47
UBTF-210ENST00000529947 WDR7Q9Y4E6 1490 aa12.11□□□□□ -0.47
UBTF-210ENST00000529947 CROCC2H7BZ55 1655 aa12.1□□□□□ -0.47
UBTF-210ENST00000529947 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
UBTF-210ENST00000529947 ARID4BQ4LE39 1312 aaPredicted RBP12.1□□□□□ -0.47
UBTF-210ENST00000529947 WASHC2AQ641Q2 1341 aa12.1□□□□□ -0.47
UBTF-210ENST00000529947 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
UBTF-210ENST00000529947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBTF-210ENST00000529947 KDM5DQ9BY66 1539 aa12.08□□□□□ -0.48
UBTF-210ENST00000529947 TEX14Q8IWB6 1497 aa12.08□□□□□ -0.48
UBTF-210ENST00000529947 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
UBTF-210ENST00000529947 SAMD9LQ8IVG5 1584 aa12.07□□□□□ -0.48
UBTF-210ENST00000529947 CCDC7Q96M83 1385 aa12.06□□□□□ -0.48
UBTF-210ENST00000529947 MAST1Q9Y2H9 1570 aa12.06□□□□□ -0.48
UBTF-210ENST00000529947 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
UBTF-210ENST00000529947 SPAG9O60271 1321 aaKnown RBP12.06□□□□□ -0.48
UBTF-210ENST00000529947 ZBTB22O15209 634 aa12.05□□□□□ -0.48
UBTF-210ENST00000529947 SAMD1Q6SPF0 538 aaPredicted RBP12.05□□□□□ -0.48
UBTF-210ENST00000529947 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
UBTF-210ENST00000529947 UHRF1BP1Q6BDS2 1440 aa12.04□□□□□ -0.48
UBTF-210ENST00000529947 CDC42BPBQ9Y5S2 1711 aa12.04□□□□□ -0.48
UBTF-210ENST00000529947 CARD11Q9BXL7 1154 aa12.04□□□□□ -0.48
UBTF-210ENST00000529947 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
UBTF-210ENST00000529947 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
UBTF-210ENST00000529947 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
UBTF-210ENST00000529947 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
UBTF-210ENST00000529947 DUOX2Q9NRD8 1548 aa12.03□□□□□ -0.48
UBTF-210ENST00000529947 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.48
UBTF-210ENST00000529947 ABCA9Q8IUA7 1624 aa12.02□□□□□ -0.49
UBTF-210ENST00000529947 C11orf95C9JLR9 678 aaPredicted RBP12.02□□□□□ -0.49
UBTF-210ENST00000529947 STAC3Q96MF2 364 aa12.02□□□□□ -0.49
UBTF-210ENST00000529947 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.49
UBTF-210ENST00000529947 ERBINQ96RT1 1412 aa12.02□□□□□ -0.49
UBTF-210ENST00000529947 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
UBTF-210ENST00000529947 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
UBTF-210ENST00000529947 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
UBTF-210ENST00000529947 MYT1LQ9UL68 1186 aa12.01□□□□□ -0.49
UBTF-210ENST00000529947 KIF7Q2M1P5 1343 aa12.01□□□□□ -0.49
UBTF-210ENST00000529947 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
UBTF-210ENST00000529947 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
UBTF-210ENST00000529947 ROCK2O75116 1388 aaKnown RBP12□□□□□ -0.49
UBTF-210ENST00000529947 USP47Q96K76 1375 aa12□□□□□ -0.49
UBTF-210ENST00000529947 CD109Q6YHK3 1445 aa12□□□□□ -0.49
UBTF-210ENST00000529947 FAM135AQ9P2D6 1515 aa12□□□□□ -0.49
UBTF-210ENST00000529947 AFAP1Q8N556 730 aa11.99□□□□□ -0.49
UBTF-210ENST00000529947 PRKRIP1Q9H875 184 aaPredicted RBP11.99□□□□□ -0.49
UBTF-210ENST00000529947 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
UBTF-210ENST00000529947 KANK1Q14678 1352 aa11.98□□□□□ -0.49
UBTF-210ENST00000529947 PLXNC1O60486 1568 aa11.97□□□□□ -0.49
UBTF-210ENST00000529947 TRAPPC8Q9Y2L5 1435 aa11.97□□□□□ -0.49
UBTF-210ENST00000529947 NEFLP07196 543 aa11.97□□□□□ -0.49
UBTF-210ENST00000529947 RGL3Q3MIN7 710 aa11.97□□□□□ -0.49
UBTF-210ENST00000529947 RALGAPBQ86X10 1494 aa11.96□□□□□ -0.49
UBTF-210ENST00000529947 CAPN15O75808 1086 aa11.96□□□□□ -0.49
UBTF-210ENST00000529947 POLR3GLQ9BT43 218 aa11.96□□□□□ -0.49
UBTF-210ENST00000529947 ATP10AO60312 1499 aa11.95□□□□□ -0.5
UBTF-210ENST00000529947 UNC13BO14795 1591 aa11.94□□□□□ -0.5
UBTF-210ENST00000529947 ST20-MTHFSA0A0A6YYL1 179 aa11.94□□□□□ -0.5
UBTF-210ENST00000529947 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
UBTF-210ENST00000529947 ABCC1P33527 1531 aa11.94□□□□□ -0.5
UBTF-210ENST00000529947 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
UBTF-210ENST00000529947 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBTF-210ENST00000529947 MRS2Q9HD23 443 aa11.93□□□□□ -0.5
UBTF-210ENST00000529947 FANCAO15360 1455 aa11.93□□□□□ -0.5
UBTF-210ENST00000529947 DHX29Q7Z478 1369 aaKnown RBP11.92□□□□□ -0.5
UBTF-210ENST00000529947 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
UBTF-210ENST00000529947 KIF3BO15066 747 aa11.91□□□□□ -0.5
UBTF-210ENST00000529947 MAGI2Q86UL8 1455 aa11.9□□□□□ -0.5
UBTF-210ENST00000529947 IQGAP3Q86VI3 1631 aa11.9□□□□□ -0.5
UBTF-210ENST00000529947 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
UBTF-210ENST00000529947 RALBP1Q15311 655 aa11.9□□□□□ -0.5
UBTF-210ENST00000529947 PRAG1Q86YV5 1406 aa11.9□□□□□ -0.5
UBTF-210ENST00000529947 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
UBTF-210ENST00000529947 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
UBTF-210ENST00000529947 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
UBTF-210ENST00000529947 NEO1Q92859 1461 aa11.89□□□□□ -0.51
UBTF-210ENST00000529947 FRMPD1Q5SYB0 1578 aa11.88□□□□□ -0.51
UBTF-210ENST00000529947 FAM9BQ8IZU0 186 aa11.88□□□□□ -0.51
UBTF-210ENST00000529947 GPRASP1Q5JY77 1395 aa11.88□□□□□ -0.51
UBTF-210ENST00000529947 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
UBTF-210ENST00000529947 TMF1P82094 1093 aa11.87□□□□□ -0.51
UBTF-210ENST00000529947 FKBP8Q14318 412 aa11.87□□□□□ -0.51
UBTF-210ENST00000529947 CDCA8Q53HL2 280 aa11.87□□□□□ -0.51
UBTF-210ENST00000529947 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
UBTF-210ENST00000529947 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
UBTF-210ENST00000529947 NBPF1Q3BBV0 1214 aa11.86□□□□□ -0.51
UBTF-210ENST00000529947 KDM5CP41229 1560 aa11.86□□□□□ -0.51
UBTF-210ENST00000529947 CFAP74Q9C0B2 1584 aa11.86□□□□□ -0.51
UBTF-210ENST00000529947 PTPRTO14522 1441 aa11.86□□□□□ -0.51
UBTF-210ENST00000529947 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
UBTF-210ENST00000529947 A2MP01023 1474 aa11.84□□□□□ -0.51
UBTF-210ENST00000529947 DSG3P32926 999 aa11.84□□□□□ -0.51
UBTF-210ENST00000529947 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
UBTF-210ENST00000529947 ATP7AQ04656 1500 aa11.84□□□□□ -0.51
UBTF-210ENST00000529947 ZFYVE16Q7Z3T8 1539 aa11.83□□□□□ -0.52
UBTF-210ENST00000529947 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
UBTF-210ENST00000529947 ZNF518AQ6AHZ1 1483 aa11.83□□□□□ -0.52
UBTF-210ENST00000529947 ZBED9Q6R2W3 1325 aa11.82□□□□□ -0.52
UBTF-210ENST00000529947 RAPGEF3O95398 923 aa11.81□□□□□ -0.52
UBTF-210ENST00000529947 EIF2AK4Q9P2K8 1649 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms