RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 FBXW7Q969H0 707 aa9.44□□□□□ -0.9
TCN1-202ENST00000529251 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
TCN1-202ENST00000529251 VPS9D1Q9Y2B5 631 aa9.44□□□□□ -0.9
TCN1-202ENST00000529251 DDX12PQ92771 950 aa9.43□□□□□ -0.9
TCN1-202ENST00000529251 EPAS1Q99814 870 aa9.42□□□□□ -0.9
TCN1-202ENST00000529251 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
TCN1-202ENST00000529251 COL9A1P20849 921 aa9.4□□□□□ -0.9
TCN1-202ENST00000529251 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
TCN1-202ENST00000529251 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
TCN1-202ENST00000529251 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
TCN1-202ENST00000529251 NBR1Q14596 966 aa9.37□□□□□ -0.91
TCN1-202ENST00000529251 C6orf132Q5T0Z8 1188 aa9.37□□□□□ -0.91
TCN1-202ENST00000529251 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
TCN1-202ENST00000529251 EN1Q05925 392 aaPredicted RBP9.36□□□□□ -0.91
TCN1-202ENST00000529251 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
TCN1-202ENST00000529251 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
TCN1-202ENST00000529251 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
TCN1-202ENST00000529251 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
TCN1-202ENST00000529251 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
TCN1-202ENST00000529251 OSBPP22059 807 aa9.32□□□□□ -0.92
TCN1-202ENST00000529251 MAP3K7O43318 606 aa9.31□□□□□ -0.92
TCN1-202ENST00000529251 RABGEF1Q9UJ41 708 aa9.3□□□□□ -0.92
TCN1-202ENST00000529251 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
TCN1-202ENST00000529251 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
TCN1-202ENST00000529251 P3H3Q8IVL6 736 aa9.28□□□□□ -0.92
TCN1-202ENST00000529251 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
TCN1-202ENST00000529251 NBPF3Q9H094 633 aa9.28□□□□□ -0.92
TCN1-202ENST00000529251 MRPL50Q8N5N7 158 aaKnown RBP9.27□□□□□ -0.93
TCN1-202ENST00000529251 KIAA1468Q9P260 1216 aa9.27□□□□□ -0.93
TCN1-202ENST00000529251 HCSTQ9UBK5 93 aa9.27□□□□□ -0.93
TCN1-202ENST00000529251 TRIM6-TRIM34B2RNG4 842 aa9.26□□□□□ -0.93
TCN1-202ENST00000529251 MLLT3P42568 568 aaPredicted RBP9.26□□□□□ -0.93
TCN1-202ENST00000529251 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
TCN1-202ENST00000529251 TSKSQ9UJT2 592 aa9.24□□□□□ -0.93
TCN1-202ENST00000529251 THSD4Q6ZMP0 1018 aa9.23□□□□□ -0.93
TCN1-202ENST00000529251 PRSS12P56730 875 aa9.22□□□□□ -0.93
TCN1-202ENST00000529251 LAPTM4BQ86VI4 370 aa9.22□□□□□ -0.93
TCN1-202ENST00000529251 CERKQ8TCT0 537 aa9.22□□□□□ -0.93
TCN1-202ENST00000529251 WNT2BQ93097 391 aa9.22□□□□□ -0.93
TCN1-202ENST00000529251 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
TCN1-202ENST00000529251 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.94
TCN1-202ENST00000529251 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
TCN1-202ENST00000529251 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
TCN1-202ENST00000529251 SEMA3EO15041 775 aa9.2□□□□□ -0.94
TCN1-202ENST00000529251 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
TCN1-202ENST00000529251 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
TCN1-202ENST00000529251 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
TCN1-202ENST00000529251 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
TCN1-202ENST00000529251 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
TCN1-202ENST00000529251 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
TCN1-202ENST00000529251 BCANQ96GW7 911 aa9.18□□□□□ -0.94
TCN1-202ENST00000529251 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
TCN1-202ENST00000529251 PTPN5P54829 565 aa9.17□□□□□ -0.94
TCN1-202ENST00000529251 TTC13Q8NBP0 860 aa9.17□□□□□ -0.94
TCN1-202ENST00000529251 ANKK1Q8NFD2 765 aa9.17□□□□□ -0.94
TCN1-202ENST00000529251 TESPA1A2RU30 521 aaPredicted RBP9.15□□□□□ -0.94
TCN1-202ENST00000529251 BCAMP50895 628 aa9.15□□□□□ -0.94
TCN1-202ENST00000529251 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
TCN1-202ENST00000529251 SMAPO00193 183 aa9.13□□□□□ -0.95
TCN1-202ENST00000529251 PTGDRQ13258 359 aa9.13□□□□□ -0.95
TCN1-202ENST00000529251 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
TCN1-202ENST00000529251 TATDN2Q93075 761 aa9.13□□□□□ -0.95
TCN1-202ENST00000529251 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
TCN1-202ENST00000529251 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
TCN1-202ENST00000529251 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
TCN1-202ENST00000529251 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
TCN1-202ENST00000529251 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
TCN1-202ENST00000529251 LRCH3Q96II8 777 aa9.08□□□□□ -0.96
TCN1-202ENST00000529251 WBP1LQ9NX94 342 aa9.08□□□□□ -0.96
TCN1-202ENST00000529251 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.08□□□□□ -0.96
TCN1-202ENST00000529251 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
TCN1-202ENST00000529251 SAMD7Q7Z3H4 446 aa9.06□□□□□ -0.96
TCN1-202ENST00000529251 EYA1Q99502 592 aa9.06□□□□□ -0.96
TCN1-202ENST00000529251 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
TCN1-202ENST00000529251 HPS5Q9UPZ3 1129 aa9.05□□□□□ -0.96
TCN1-202ENST00000529251 FCHSD2O94868 740 aa9.04□□□□□ -0.96
TCN1-202ENST00000529251 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
TCN1-202ENST00000529251 SMYD5Q6GMV2 418 aa9.04□□□□□ -0.96
TCN1-202ENST00000529251 NYAP1Q6ZVC0 841 aa9.04□□□□□ -0.96
TCN1-202ENST00000529251 GPR37O15354 613 aa9.03□□□□□ -0.96
TCN1-202ENST00000529251 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
TCN1-202ENST00000529251 ADGRG1Q9Y653 693 aa9.02□□□□□ -0.97
TCN1-202ENST00000529251 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
TCN1-202ENST00000529251 PPP4CP60510 307 aa8.99□□□□□ -0.97
TCN1-202ENST00000529251 HIC1Q14526 733 aa8.99□□□□□ -0.97
TCN1-202ENST00000529251 FAM161AQ3B820 660 aa8.99□□□□□ -0.97
TCN1-202ENST00000529251 SWT1Q5T5J6 900 aaKnown RBP8.99□□□□□ -0.97
TCN1-202ENST00000529251 FECHP22830 423 aa8.97□□□□□ -0.97
TCN1-202ENST00000529251 RBM46Q8TBY0 533 aaKnown RBP8.97□□□□□ -0.97
TCN1-202ENST00000529251 HDGFP51858 240 aaKnown RBP8.96□□□□□ -0.98
TCN1-202ENST00000529251 TMEM134Q9H6X4 195 aa8.96□□□□□ -0.98
TCN1-202ENST00000529251 GNPATO15228 680 aa8.95□□□□□ -0.98
TCN1-202ENST00000529251 DNAJB2P25686 324 aa8.95□□□□□ -0.98
TCN1-202ENST00000529251 RCCD1A6NED2 376 aa8.94□□□□□ -0.98
TCN1-202ENST00000529251 RNF40O75150 1001 aa8.94□□□□□ -0.98
TCN1-202ENST00000529251 PXYLP1Q8TE99 480 aa8.94□□□□□ -0.98
TCN1-202ENST00000529251 A0A0G2JS52 829 aa8.93□□□□□ -0.98
TCN1-202ENST00000529251 APLP1P51693 650 aa8.93□□□□□ -0.98
TCN1-202ENST00000529251 GPIHBP1Q8IV16 184 aa8.93□□□□□ -0.98
TCN1-202ENST00000529251 SLF2Q8IX21 1173 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms