RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 MED1Q15648 1581 aaPredicted RBP10.94□□□□□ -0.66
C11orf88-203ENST00000529167 C3P01024 1663 aa10.93□□□□□ -0.66
C11orf88-203ENST00000529167 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
C11orf88-203ENST00000529167 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
C11orf88-203ENST00000529167 ARID3CA6NKF2 412 aa10.9□□□□□ -0.66
C11orf88-203ENST00000529167 MLECQ14165 292 aa10.9□□□□□ -0.66
C11orf88-203ENST00000529167 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
C11orf88-203ENST00000529167 KDM5CP41229 1560 aa10.9□□□□□ -0.66
C11orf88-203ENST00000529167 CEBPAP49715 358 aaPredicted RBP10.9□□□□□ -0.67
C11orf88-203ENST00000529167 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.67
C11orf88-203ENST00000529167 AGLP35573 1532 aa10.89□□□□□ -0.67
C11orf88-203ENST00000529167 PLCH2O75038 1416 aa10.89□□□□□ -0.67
C11orf88-203ENST00000529167 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
C11orf88-203ENST00000529167 TRAPPC8Q9Y2L5 1435 aa10.89□□□□□ -0.67
C11orf88-203ENST00000529167 PPP4R3CPQ6ZMV5 832 aa10.88□□□□□ -0.67
C11orf88-203ENST00000529167 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
C11orf88-203ENST00000529167 TPRNQ4KMQ1 711 aa10.87□□□□□ -0.67
C11orf88-203ENST00000529167 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
C11orf88-203ENST00000529167 DIP2CQ9Y2E4 1556 aa10.87□□□□□ -0.67
C11orf88-203ENST00000529167 PLEKHD1A6NEE1 506 aa10.86□□□□□ -0.67
C11orf88-203ENST00000529167 TRIM52Q96A61 297 aa10.86□□□□□ -0.67
C11orf88-203ENST00000529167 EEA1Q15075 1411 aa10.86□□□□□ -0.67
C11orf88-203ENST00000529167 CAMSAP1Q5T5Y3 1602 aa10.86□□□□□ -0.67
C11orf88-203ENST00000529167 DHX37Q8IY37 1157 aaKnown RBP10.86□□□□□ -0.67
C11orf88-203ENST00000529167 MROH2AA6NES4 1674 aa10.85□□□□□ -0.67
C11orf88-203ENST00000529167 NPATQ14207 1427 aa10.85□□□□□ -0.67
C11orf88-203ENST00000529167 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
C11orf88-203ENST00000529167 PLA2R1Q13018 1463 aa10.85□□□□□ -0.67
C11orf88-203ENST00000529167 ZNF518AQ6AHZ1 1483 aa10.85□□□□□ -0.67
C11orf88-203ENST00000529167 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
C11orf88-203ENST00000529167 FAM43AQ8N2R8 423 aa10.85□□□□□ -0.67
C11orf88-203ENST00000529167 ANP32AP39687 249 aaKnown RBP10.84□□□□□ -0.67
C11orf88-203ENST00000529167 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
C11orf88-203ENST00000529167 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
C11orf88-203ENST00000529167 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
C11orf88-203ENST00000529167 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
C11orf88-203ENST00000529167 PAXIP1Q6ZW49 1069 aaPredicted RBP10.83□□□□□ -0.68
C11orf88-203ENST00000529167 MYO5CQ9NQX4 1742 aa10.83□□□□□ -0.68
C11orf88-203ENST00000529167 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
C11orf88-203ENST00000529167 P3H3Q8IVL6 736 aa10.83□□□□□ -0.68
C11orf88-203ENST00000529167 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
C11orf88-203ENST00000529167 ABCA6Q8N139 1617 aa10.82□□□□□ -0.68
C11orf88-203ENST00000529167 MLH3Q9UHC1 1453 aa10.82□□□□□ -0.68
C11orf88-203ENST00000529167 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
C11orf88-203ENST00000529167 PKD2Q13563 968 aa10.79□□□□□ -0.68
C11orf88-203ENST00000529167 GSE1Q14687 1217 aa10.79□□□□□ -0.68
C11orf88-203ENST00000529167 CPS1P31327 1500 aa10.78□□□□□ -0.68
C11orf88-203ENST00000529167 NEFMP07197 916 aa10.78□□□□□ -0.68
C11orf88-203ENST00000529167 HSPA1LP34931 641 aa10.78□□□□□ -0.68
C11orf88-203ENST00000529167 EFCAB2Q5VUJ9 269 aa10.78□□□□□ -0.68
C11orf88-203ENST00000529167 MYO3AQ8NEV4 1616 aa10.78□□□□□ -0.68
C11orf88-203ENST00000529167 CHMP4AQ9BY43 222 aa10.78□□□□□ -0.68
C11orf88-203ENST00000529167 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.68
C11orf88-203ENST00000529167 DDX10Q13206 875 aaKnown RBP10.77□□□□□ -0.69
C11orf88-203ENST00000529167 RRP9O43818 475 aaKnown RBP10.76□□□□□ -0.69
C11orf88-203ENST00000529167 IRX6P78412 446 aaPredicted RBP10.76□□□□□ -0.69
C11orf88-203ENST00000529167 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
C11orf88-203ENST00000529167 CEP170BQ9Y4F5 1589 aaPredicted RBP10.75□□□□□ -0.69
C11orf88-203ENST00000529167 CDK13Q14004 1512 aaKnown RBP10.75□□□□□ -0.69
C11orf88-203ENST00000529167 ANP32CO43423 234 aa10.75□□□□□ -0.69
C11orf88-203ENST00000529167 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
C11orf88-203ENST00000529167 SUPT6HQ7KZ85 1726 aaKnown RBP10.74□□□□□ -0.69
C11orf88-203ENST00000529167 KIDINS220Q9ULH0 1771 aa10.74□□□□□ -0.69
C11orf88-203ENST00000529167 ITSN2Q9NZM3 1697 aa10.73□□□□□ -0.69
C11orf88-203ENST00000529167 B4GALNT3Q6L9W6 998 aa10.73□□□□□ -0.69
C11orf88-203ENST00000529167 KIF14Q15058 1648 aa10.73□□□□□ -0.69
C11orf88-203ENST00000529167 ABCC1P33527 1531 aa10.73□□□□□ -0.69
C11orf88-203ENST00000529167 TOM1O60784 492 aa10.72□□□□□ -0.69
C11orf88-203ENST00000529167 ARHGAP5Q13017 1502 aa10.72□□□□□ -0.69
C11orf88-203ENST00000529167 AFAP1Q8N556 730 aa10.71□□□□□ -0.69
C11orf88-203ENST00000529167 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.69
C11orf88-203ENST00000529167 CDC42BPBQ9Y5S2 1711 aa10.71□□□□□ -0.69
C11orf88-203ENST00000529167 ZMYM3Q14202 1370 aa10.71□□□□□ -0.69
C11orf88-203ENST00000529167 PTPRKQ15262 1439 aa10.71□□□□□ -0.69
C11orf88-203ENST00000529167 POLR1AO95602 1720 aaPredicted RBP10.71□□□□□ -0.7
C11orf88-203ENST00000529167 NEURL4Q96JN8 1562 aa10.7□□□□□ -0.7
C11orf88-203ENST00000529167 SHANK2Q9UPX8 1470 aa10.7□□□□□ -0.7
C11orf88-203ENST00000529167 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
C11orf88-203ENST00000529167 HSP90AA2PQ14568 343 aaPredicted RBP10.69□□□□□ -0.7
C11orf88-203ENST00000529167 VPS8Q8N3P4 1428 aa10.69□□□□□ -0.7
C11orf88-203ENST00000529167 VWDEQ8N2E2 1590 aa10.69□□□□□ -0.7
C11orf88-203ENST00000529167 RSPH4AQ5TD94 716 aa10.69□□□□□ -0.7
C11orf88-203ENST00000529167 SAMD1Q6SPF0 538 aaPredicted RBP10.69□□□□□ -0.7
C11orf88-203ENST00000529167 A2ML1A8K2U0 1454 aa10.68□□□□□ -0.7
C11orf88-203ENST00000529167 DNMT1P26358 1616 aaKnown RBP10.68□□□□□ -0.7
C11orf88-203ENST00000529167 CLTCQ00610 1675 aaKnown RBP10.68□□□□□ -0.7
C11orf88-203ENST00000529167 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
C11orf88-203ENST00000529167 PLXNC1O60486 1568 aa10.68□□□□□ -0.7
C11orf88-203ENST00000529167 CLIP1P30622 1438 aa10.67□□□□□ -0.7
C11orf88-203ENST00000529167 HNRNPUQ00839 825 aaKnown RBP eCLIP10.67□□□□□ -0.7
C11orf88-203ENST00000529167 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
C11orf88-203ENST00000529167 RGS17Q9UGC6 210 aaPredicted RBP10.66□□□□□ -0.7
C11orf88-203ENST00000529167 NAP1L2Q9ULW6 460 aaPredicted RBP10.66□□□□□ -0.7
C11orf88-203ENST00000529167 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.7
C11orf88-203ENST00000529167 PIP4K2BP78356 416 aa10.65□□□□□ -0.7
C11orf88-203ENST00000529167 RNF17Q9BXT8 1623 aaKnown RBP10.64□□□□□ -0.71
C11orf88-203ENST00000529167 BRD2P25440 801 aaKnown RBP10.64□□□□□ -0.71
C11orf88-203ENST00000529167 CHMP4BQ9H444 224 aaKnown RBP10.64□□□□□ -0.71
C11orf88-203ENST00000529167 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
C11orf88-203ENST00000529167 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms