RNA–Protein interactions for RNA: ENST00000528869.1

CD44-AS1-201, CD44 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene CD44-AS1, Length 587 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-AS1-201ENST00000528869 ZBED2Q9BTP6 218 aa13.59□□□□□ -0.23
CD44-AS1-201ENST00000528869 SLC4A5Q9BY07 1137 aa13.59□□□□□ -0.23
CD44-AS1-201ENST00000528869 PPP1R3GB7ZBB8 358 aa13.58□□□□□ -0.24
CD44-AS1-201ENST00000528869 NBR1Q14596 966 aa13.58□□□□□ -0.24
CD44-AS1-201ENST00000528869 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
CD44-AS1-201ENST00000528869 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
CD44-AS1-201ENST00000528869 COL9A1P20849 921 aa13.56□□□□□ -0.24
CD44-AS1-201ENST00000528869 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
CD44-AS1-201ENST00000528869 C6orf132Q5T0Z8 1188 aa13.54□□□□□ -0.24
CD44-AS1-201ENST00000528869 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
CD44-AS1-201ENST00000528869 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
CD44-AS1-201ENST00000528869 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
CD44-AS1-201ENST00000528869 MAP3K7O43318 606 aa13.5□□□□□ -0.25
CD44-AS1-201ENST00000528869 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
CD44-AS1-201ENST00000528869 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
CD44-AS1-201ENST00000528869 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
CD44-AS1-201ENST00000528869 BHMG1C9JSJ3 638 aaPredicted RBP13.49□□□□□ -0.25
CD44-AS1-201ENST00000528869 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
CD44-AS1-201ENST00000528869 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
CD44-AS1-201ENST00000528869 OSBPP22059 807 aa13.46□□□□□ -0.25
CD44-AS1-201ENST00000528869 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
CD44-AS1-201ENST00000528869 RABGEF1Q9UJ41 708 aa13.44□□□□□ -0.26
CD44-AS1-201ENST00000528869 KCTD12Q96CX2 325 aaKnown RBP13.43□□□□□ -0.26
CD44-AS1-201ENST00000528869 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
CD44-AS1-201ENST00000528869 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
CD44-AS1-201ENST00000528869 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
CD44-AS1-201ENST00000528869 CDHR5Q9HBB8 845 aa13.39□□□□□ -0.27
CD44-AS1-201ENST00000528869 KIAA1468Q9P260 1216 aa13.39□□□□□ -0.27
CD44-AS1-201ENST00000528869 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
CD44-AS1-201ENST00000528869 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
CD44-AS1-201ENST00000528869 HCSTQ9UBK5 93 aa13.37□□□□□ -0.27
CD44-AS1-201ENST00000528869 GOLGA8CPA6NN73 597 aa13.36□□□□□ -0.27
CD44-AS1-201ENST00000528869 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
CD44-AS1-201ENST00000528869 CERKQ8TCT0 537 aa13.34□□□□□ -0.27
CD44-AS1-201ENST00000528869 WNT2BQ93097 391 aa13.34□□□□□ -0.27
CD44-AS1-201ENST00000528869 SEMA3EO15041 775 aa13.33□□□□□ -0.28
CD44-AS1-201ENST00000528869 PRSS12P56730 875 aa13.32□□□□□ -0.28
CD44-AS1-201ENST00000528869 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
CD44-AS1-201ENST00000528869 LAPTM4BQ86VI4 370 aa13.32□□□□□ -0.28
CD44-AS1-201ENST00000528869 CDCA7LQ96GN5 454 aa13.32□□□□□ -0.28
CD44-AS1-201ENST00000528869 SEPT9Q9UHD8 586 aaPredicted RBP13.32□□□□□ -0.28
CD44-AS1-201ENST00000528869 FAM198AQ9UFP1 575 aa13.3□□□□□ -0.28
CD44-AS1-201ENST00000528869 PACS2Q86VP3 889 aa13.29□□□□□ -0.28
CD44-AS1-201ENST00000528869 PTPN5P54829 565 aa13.28□□□□□ -0.28
CD44-AS1-201ENST00000528869 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
CD44-AS1-201ENST00000528869 ANKK1Q8NFD2 765 aa13.27□□□□□ -0.29
CD44-AS1-201ENST00000528869 ZFRQ96KR1 1074 aaKnown RBP13.27□□□□□ -0.29
CD44-AS1-201ENST00000528869 NPDC1Q9NQX5 325 aaPredicted RBP13.27□□□□□ -0.29
CD44-AS1-201ENST00000528869 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
CD44-AS1-201ENST00000528869 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
CD44-AS1-201ENST00000528869 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
CD44-AS1-201ENST00000528869 C3orf80F5H4A9 247 aa13.22□□□□□ -0.29
CD44-AS1-201ENST00000528869 SMAPO00193 183 aa13.22□□□□□ -0.29
CD44-AS1-201ENST00000528869 BCAMP50895 628 aa13.22□□□□□ -0.29
CD44-AS1-201ENST00000528869 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
CD44-AS1-201ENST00000528869 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
CD44-AS1-201ENST00000528869 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
CD44-AS1-201ENST00000528869 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
CD44-AS1-201ENST00000528869 TATDN2Q93075 761 aa13.2□□□□□ -0.3
CD44-AS1-201ENST00000528869 PTGDRQ13258 359 aa13.19□□□□□ -0.3
CD44-AS1-201ENST00000528869 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
CD44-AS1-201ENST00000528869 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
CD44-AS1-201ENST00000528869 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
CD44-AS1-201ENST00000528869 NUDT18Q6ZVK8 323 aa13.17□□□□□ -0.3
CD44-AS1-201ENST00000528869 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
CD44-AS1-201ENST00000528869 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.15□□□□□ -0.3
CD44-AS1-201ENST00000528869 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
CD44-AS1-201ENST00000528869 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
CD44-AS1-201ENST00000528869 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
CD44-AS1-201ENST00000528869 WBP1LQ9NX94 342 aa13.11□□□□□ -0.31
CD44-AS1-201ENST00000528869 FCHSD2O94868 740 aa13.1□□□□□ -0.31
CD44-AS1-201ENST00000528869 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
CD44-AS1-201ENST00000528869 TSR3Q9UJK0 312 aaKnown RBP13.09□□□□□ -0.31
CD44-AS1-201ENST00000528869 EYA1Q99502 592 aa13.07□□□□□ -0.32
CD44-AS1-201ENST00000528869 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
CD44-AS1-201ENST00000528869 ADGRG1Q9Y653 693 aa13.04□□□□□ -0.32
CD44-AS1-201ENST00000528869 GPR37O15354 613 aa13.03□□□□□ -0.32
CD44-AS1-201ENST00000528869 HIC1Q14526 733 aa13.03□□□□□ -0.32
CD44-AS1-201ENST00000528869 PPP4CP60510 307 aa13.02□□□□□ -0.33
CD44-AS1-201ENST00000528869 FAM161AQ3B820 660 aa13.02□□□□□ -0.33
CD44-AS1-201ENST00000528869 RNF40O75150 1001 aa13.01□□□□□ -0.33
CD44-AS1-201ENST00000528869 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
CD44-AS1-201ENST00000528869 SWT1Q5T5J6 900 aaKnown RBP13.01□□□□□ -0.33
CD44-AS1-201ENST00000528869 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
CD44-AS1-201ENST00000528869 GNPATO15228 680 aa12.98□□□□□ -0.33
CD44-AS1-201ENST00000528869 IFFO2Q5TF58 517 aa12.98□□□□□ -0.33
CD44-AS1-201ENST00000528869 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
CD44-AS1-201ENST00000528869 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
CD44-AS1-201ENST00000528869 FECHP22830 423 aa12.96□□□□□ -0.33
CD44-AS1-201ENST00000528869 DNAJB2P25686 324 aa12.96□□□□□ -0.33
CD44-AS1-201ENST00000528869 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
CD44-AS1-201ENST00000528869 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
CD44-AS1-201ENST00000528869 TULP1O00294 542 aaPredicted RBP12.94□□□□□ -0.34
CD44-AS1-201ENST00000528869 TMEM134Q9H6X4 195 aa12.94□□□□□ -0.34
CD44-AS1-201ENST00000528869 PXYLP1Q8TE99 480 aa12.92□□□□□ -0.34
CD44-AS1-201ENST00000528869 OATP04181 439 aa12.91□□□□□ -0.34
CD44-AS1-201ENST00000528869 APLP1P51693 650 aa12.91□□□□□ -0.34
CD44-AS1-201ENST00000528869 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
CD44-AS1-201ENST00000528869 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
CD44-AS1-201ENST00000528869 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms