RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 CCDC184Q52MB2 194 aa13.96□□□□□ -0.17
MSRA-210ENST00000528246 INSRP06213 1382 aa13.95□□□□□ -0.18
MSRA-210ENST00000528246 ZMYM4Q5VZL5 1548 aa13.95□□□□□ -0.18
MSRA-210ENST00000528246 ZCCHC11Q5TAX3 1644 aaKnown RBP13.94□□□□□ -0.18
MSRA-210ENST00000528246 C9orf84Q5VXU9 1444 aa13.94□□□□□ -0.18
MSRA-210ENST00000528246 E9PCH4 1651 aa13.94□□□□□ -0.18
MSRA-210ENST00000528246 KIF15Q9NS87 1388 aa13.93□□□□□ -0.18
MSRA-210ENST00000528246 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
MSRA-210ENST00000528246 FAM9BQ8IZU0 186 aa13.93□□□□□ -0.18
MSRA-210ENST00000528246 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
MSRA-210ENST00000528246 LAMC1P11047 1609 aa13.93□□□□□ -0.18
MSRA-210ENST00000528246 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
MSRA-210ENST00000528246 GLI2P10070 1586 aa13.92□□□□□ -0.18
MSRA-210ENST00000528246 COL17A1Q9UMD9 1497 aaPredicted RBP13.92□□□□□ -0.18
MSRA-210ENST00000528246 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
MSRA-210ENST00000528246 MSH5O43196 834 aa13.91□□□□□ -0.18
MSRA-210ENST00000528246 PKD2Q13563 968 aa13.91□□□□□ -0.18
MSRA-210ENST00000528246 MAST1Q9Y2H9 1570 aa13.91□□□□□ -0.18
MSRA-210ENST00000528246 RALBP1Q15311 655 aa13.9□□□□□ -0.18
MSRA-210ENST00000528246 ATP10BO94823 1461 aa13.89□□□□□ -0.19
MSRA-210ENST00000528246 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
MSRA-210ENST00000528246 PNISRQ8TF01 805 aaKnown RBP13.89□□□□□ -0.19
MSRA-210ENST00000528246 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
MSRA-210ENST00000528246 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
MSRA-210ENST00000528246 NUP155O75694 1391 aa13.87□□□□□ -0.19
MSRA-210ENST00000528246 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
MSRA-210ENST00000528246 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
MSRA-210ENST00000528246 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
MSRA-210ENST00000528246 UNC13BO14795 1591 aa13.86□□□□□ -0.19
MSRA-210ENST00000528246 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
MSRA-210ENST00000528246 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
MSRA-210ENST00000528246 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
MSRA-210ENST00000528246 MYBBP1AQ9BQG0 1328 aaKnown RBP13.85□□□□□ -0.19
MSRA-210ENST00000528246 MAP3K4Q9Y6R4 1608 aa13.85□□□□□ -0.19
MSRA-210ENST00000528246 IRX6P78412 446 aaPredicted RBP13.84□□□□□ -0.19
MSRA-210ENST00000528246 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
MSRA-210ENST00000528246 TRPM1Q7Z4N2 1603 aa13.84□□□□□ -0.19
MSRA-210ENST00000528246 ATP10AO60312 1499 aa13.84□□□□□ -0.19
MSRA-210ENST00000528246 EIF2AK4Q9P2K8 1649 aaKnown RBP13.84□□□□□ -0.19
MSRA-210ENST00000528246 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
MSRA-210ENST00000528246 FBXO41Q8TF61 875 aa13.84□□□□□ -0.19
MSRA-210ENST00000528246 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
MSRA-210ENST00000528246 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
MSRA-210ENST00000528246 PLXNC1O60486 1568 aa13.83□□□□□ -0.2
MSRA-210ENST00000528246 PRAG1Q86YV5 1406 aa13.82□□□□□ -0.2
MSRA-210ENST00000528246 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
MSRA-210ENST00000528246 PLEKHH2Q8IVE3 1493 aa13.81□□□□□ -0.2
MSRA-210ENST00000528246 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
MSRA-210ENST00000528246 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
MSRA-210ENST00000528246 SAMD9LQ8IVG5 1584 aa13.8□□□□□ -0.2
MSRA-210ENST00000528246 IQGAP3Q86VI3 1631 aa13.8□□□□□ -0.2
MSRA-210ENST00000528246 MAGI2Q86UL8 1455 aa13.79□□□□□ -0.2
MSRA-210ENST00000528246 PRDM15P57071 1507 aaPredicted RBP13.79□□□□□ -0.2
MSRA-210ENST00000528246 CDC42BPBQ9Y5S2 1711 aa13.79□□□□□ -0.2
MSRA-210ENST00000528246 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
MSRA-210ENST00000528246 NLRP13Q86W25 1043 aa13.78□□□□□ -0.2
MSRA-210ENST00000528246 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
MSRA-210ENST00000528246 CCDC144AA2RUR9 1427 aa13.78□□□□□ -0.2
MSRA-210ENST00000528246 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
MSRA-210ENST00000528246 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
MSRA-210ENST00000528246 BCL11AQ9H165 835 aa13.75□□□□□ -0.21
MSRA-210ENST00000528246 STAC3Q96MF2 364 aa13.74□□□□□ -0.21
MSRA-210ENST00000528246 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
MSRA-210ENST00000528246 ERBINQ96RT1 1412 aa13.74□□□□□ -0.21
MSRA-210ENST00000528246 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
MSRA-210ENST00000528246 DUOX2Q9NRD8 1548 aa13.73□□□□□ -0.21
MSRA-210ENST00000528246 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
MSRA-210ENST00000528246 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
MSRA-210ENST00000528246 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
MSRA-210ENST00000528246 DCAF11Q8TEB1 546 aa13.72□□□□□ -0.21
MSRA-210ENST00000528246 A2MP01023 1474 aa13.72□□□□□ -0.21
MSRA-210ENST00000528246 PLA2R1Q13018 1463 aa13.72□□□□□ -0.21
MSRA-210ENST00000528246 RRP1P56182 461 aaKnown RBP13.71□□□□□ -0.21
MSRA-210ENST00000528246 TCERG1O14776 1098 aaKnown RBP13.7□□□□□ -0.22
MSRA-210ENST00000528246 MS4A1P11836 297 aa13.7□□□□□ -0.22
MSRA-210ENST00000528246 ANP32AP39687 249 aaKnown RBP13.7□□□□□ -0.22
MSRA-210ENST00000528246 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
MSRA-210ENST00000528246 IPO9Q96P70 1041 aaKnown RBP13.7□□□□□ -0.22
MSRA-210ENST00000528246 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
MSRA-210ENST00000528246 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
MSRA-210ENST00000528246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.68□□□□□ -0.22
MSRA-210ENST00000528246 ABCA9Q8IUA7 1624 aa13.67□□□□□ -0.22
MSRA-210ENST00000528246 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
MSRA-210ENST00000528246 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
MSRA-210ENST00000528246 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
MSRA-210ENST00000528246 ARHGAP5Q13017 1502 aa13.66□□□□□ -0.22
MSRA-210ENST00000528246 TTC37Q6PGP7 1564 aa13.66□□□□□ -0.22
MSRA-210ENST00000528246 TESK2Q96S53 571 aa13.66□□□□□ -0.22
MSRA-210ENST00000528246 POLR3GLQ9BT43 218 aa13.65□□□□□ -0.22
MSRA-210ENST00000528246 NPC1L1Q9UHC9 1359 aa13.64□□□□□ -0.23
MSRA-210ENST00000528246 TMF1P82094 1093 aa13.64□□□□□ -0.23
MSRA-210ENST00000528246 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
MSRA-210ENST00000528246 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
MSRA-210ENST00000528246 ADAMTSL3P82987 1691 aa13.63□□□□□ -0.23
MSRA-210ENST00000528246 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
MSRA-210ENST00000528246 SLC24A1O60721 1099 aa13.63□□□□□ -0.23
MSRA-210ENST00000528246 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
MSRA-210ENST00000528246 SYNMO15061 1565 aa13.62□□□□□ -0.23
MSRA-210ENST00000528246 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
MSRA-210ENST00000528246 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms