RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 ONECUT3O60422 494 aaPredicted RBP10.21□□□□□ -0.77
SOX6-209ENST00000527840 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
SOX6-209ENST00000527840 CAMK2BQ13554 666 aa10.21□□□□□ -0.77
SOX6-209ENST00000527840 PROX2Q3B8N5 592 aa10.21□□□□□ -0.77
SOX6-209ENST00000527840 COL9A1P20849 921 aa10.2□□□□□ -0.78
SOX6-209ENST00000527840 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
SOX6-209ENST00000527840 EPAS1Q99814 870 aa10.2□□□□□ -0.78
SOX6-209ENST00000527840 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
SOX6-209ENST00000527840 NYAP1Q6ZVC0 841 aa10.19□□□□□ -0.78
SOX6-209ENST00000527840 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
SOX6-209ENST00000527840 IRX2Q9BZI1 471 aaPredicted RBP10.16□□□□□ -0.78
SOX6-209ENST00000527840 C6orf132Q5T0Z8 1188 aa10.14□□□□□ -0.79
SOX6-209ENST00000527840 ZFRQ96KR1 1074 aaKnown RBP10.14□□□□□ -0.79
SOX6-209ENST00000527840 BCAMP50895 628 aa10.13□□□□□ -0.79
SOX6-209ENST00000527840 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
SOX6-209ENST00000527840 TRIM6-TRIM34B2RNG4 842 aa10.12□□□□□ -0.79
SOX6-209ENST00000527840 DPYSL4O14531 572 aa10.12□□□□□ -0.79
SOX6-209ENST00000527840 FAM98CQ17RN3 349 aaKnown RBP10.1□□□□□ -0.79
SOX6-209ENST00000527840 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
SOX6-209ENST00000527840 WBP1LQ9NX94 342 aa10.07□□□□□ -0.8
SOX6-209ENST00000527840 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
SOX6-209ENST00000527840 PDIA6Q15084 440 aa10.06□□□□□ -0.8
SOX6-209ENST00000527840 KCNC4Q03721 635 aa10.05□□□□□ -0.8
SOX6-209ENST00000527840 RBM33Q96EV2 1170 aaKnown RBP10.05□□□□□ -0.8
SOX6-209ENST00000527840 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
SOX6-209ENST00000527840 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
SOX6-209ENST00000527840 TSR3Q9UJK0 312 aaKnown RBP10.05□□□□□ -0.8
SOX6-209ENST00000527840 DDX12PQ92771 950 aa10.04□□□□□ -0.8
SOX6-209ENST00000527840 NBR1Q14596 966 aa10.03□□□□□ -0.8
SOX6-209ENST00000527840 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
SOX6-209ENST00000527840 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
SOX6-209ENST00000527840 PACS2Q86VP3 889 aa10.02□□□□□ -0.81
SOX6-209ENST00000527840 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
SOX6-209ENST00000527840 MAP3K7O43318 606 aa10.01□□□□□ -0.81
SOX6-209ENST00000527840 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
SOX6-209ENST00000527840 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
SOX6-209ENST00000527840 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
SOX6-209ENST00000527840 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
SOX6-209ENST00000527840 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
SOX6-209ENST00000527840 PRSS12P56730 875 aa9.94□□□□□ -0.82
SOX6-209ENST00000527840 PPP4CP60510 307 aa9.94□□□□□ -0.82
SOX6-209ENST00000527840 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
SOX6-209ENST00000527840 LAPTM4AQ15012 233 aa9.93□□□□□ -0.82
SOX6-209ENST00000527840 E2F4Q16254 413 aa9.93□□□□□ -0.82
SOX6-209ENST00000527840 Q6ZNB5 142 aa9.92□□□□□ -0.82
SOX6-209ENST00000527840 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
SOX6-209ENST00000527840 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
SOX6-209ENST00000527840 SAMD7Q7Z3H4 446 aa9.9□□□□□ -0.82
SOX6-209ENST00000527840 TJAP1Q5JTD0 557 aa9.89□□□□□ -0.83
SOX6-209ENST00000527840 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.89□□□□□ -0.83
SOX6-209ENST00000527840 TATDN2Q93075 761 aa9.88□□□□□ -0.83
SOX6-209ENST00000527840 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
SOX6-209ENST00000527840 SMAPO00193 183 aa9.87□□□□□ -0.83
SOX6-209ENST00000527840 IL21Q9HBE4 155 aa9.87□□□□□ -0.83
SOX6-209ENST00000527840 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
SOX6-209ENST00000527840 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
SOX6-209ENST00000527840 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
SOX6-209ENST00000527840 NECTIN2Q92692 538 aa9.86□□□□□ -0.83
SOX6-209ENST00000527840 MTRQ99707 1265 aa9.85□□□□□ -0.83
SOX6-209ENST00000527840 WDR70Q9NW82 654 aa9.85□□□□□ -0.83
SOX6-209ENST00000527840 OSBPP22059 807 aa9.83□□□□□ -0.84
SOX6-209ENST00000527840 HDGFP51858 240 aaKnown RBP9.83□□□□□ -0.84
SOX6-209ENST00000527840 CDHR5Q9HBB8 845 aa9.83□□□□□ -0.84
SOX6-209ENST00000527840 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
SOX6-209ENST00000527840 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
SOX6-209ENST00000527840 V9GY48 417 aaPredicted RBP9.81□□□□□ -0.84
SOX6-209ENST00000527840 TTC13Q8NBP0 860 aa9.8□□□□□ -0.84
SOX6-209ENST00000527840 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
SOX6-209ENST00000527840 GFRA3O60609 400 aa9.79□□□□□ -0.84
SOX6-209ENST00000527840 RNF40O75150 1001 aa9.79□□□□□ -0.84
SOX6-209ENST00000527840 PPP1R18Q6NYC8 613 aa9.79□□□□□ -0.84
SOX6-209ENST00000527840 NRG2O14511 850 aaPredicted RBP9.77□□□□□ -0.85
SOX6-209ENST00000527840 APLP1P51693 650 aa9.77□□□□□ -0.85
SOX6-209ENST00000527840 SLF2Q8IX21 1173 aa9.77□□□□□ -0.85
SOX6-209ENST00000527840 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.85
SOX6-209ENST00000527840 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
SOX6-209ENST00000527840 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
SOX6-209ENST00000527840 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
SOX6-209ENST00000527840 PAXIP1Q6ZW49 1069 aaPredicted RBP9.75□□□□□ -0.85
SOX6-209ENST00000527840 LCE2BO14633 110 aa9.74□□□□□ -0.85
SOX6-209ENST00000527840 GGCXP38435 758 aa9.74□□□□□ -0.85
SOX6-209ENST00000527840 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
SOX6-209ENST00000527840 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
SOX6-209ENST00000527840 ZNF516Q92618 1163 aa9.74□□□□□ -0.85
SOX6-209ENST00000527840 CFAP44Q96MT7 982 aa9.74□□□□□ -0.85
SOX6-209ENST00000527840 NPDC1Q9NQX5 325 aaPredicted RBP9.74□□□□□ -0.85
SOX6-209ENST00000527840 PRR14Q9BWN1 585 aa9.73□□□□□ -0.85
SOX6-209ENST00000527840 TMUB1Q9BVT8 246 aa9.71□□□□□ -0.86
SOX6-209ENST00000527840 EYA1Q99502 592 aa9.69□□□□□ -0.86
SOX6-209ENST00000527840 COPS2P61201 443 aa9.68□□□□□ -0.86
SOX6-209ENST00000527840 NKX2-3Q8TAU0 364 aa9.68□□□□□ -0.86
SOX6-209ENST00000527840 ZPR1O75312 459 aa9.67□□□□□ -0.86
SOX6-209ENST00000527840 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
SOX6-209ENST00000527840 PDZRN3Q9UPQ7 1066 aa9.65□□□□□ -0.86
SOX6-209ENST00000527840 PCDHB3Q9Y5E6 796 aa9.65□□□□□ -0.86
SOX6-209ENST00000527840 DNAJB2P25686 324 aa9.64□□□□□ -0.87
SOX6-209ENST00000527840 PTGDRQ13258 359 aa9.62□□□□□ -0.87
SOX6-209ENST00000527840 RBM46Q8TBY0 533 aaKnown RBP9.61□□□□□ -0.87
SOX6-209ENST00000527840 TMEM134Q9H6X4 195 aa9.6□□□□□ -0.87
SOX6-209ENST00000527840 MLLT3P42568 568 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms