RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
SOX6-209ENST00000527840 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
SOX6-209ENST00000527840 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
SOX6-209ENST00000527840 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
SOX6-209ENST00000527840 FOXD1Q16676 465 aa20.28■□□□□ 0.84
SOX6-209ENST00000527840 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
SOX6-209ENST00000527840 MSH5O43196 834 aa19.12■□□□□ 0.65
SOX6-209ENST00000527840 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
SOX6-209ENST00000527840 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
SOX6-209ENST00000527840 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
SOX6-209ENST00000527840 ADRA2BP18089 450 aa18.75■□□□□ 0.59
SOX6-209ENST00000527840 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
SOX6-209ENST00000527840 DMRT2Q9Y5R5 561 aa17.27■□□□□ 0.36
SOX6-209ENST00000527840 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
SOX6-209ENST00000527840 PPP4R3CPQ6ZMV5 832 aa16.81■□□□□ 0.28
SOX6-209ENST00000527840 HOXD11P31277 338 aaPredicted RBP16.6■□□□□ 0.25
SOX6-209ENST00000527840 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
SOX6-209ENST00000527840 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
SOX6-209ENST00000527840 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
SOX6-209ENST00000527840 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
SOX6-209ENST00000527840 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
SOX6-209ENST00000527840 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
SOX6-209ENST00000527840 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
SOX6-209ENST00000527840 C1QBPQ07021 282 aaKnown RBP16.05■□□□□ 0.16
SOX6-209ENST00000527840 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
SOX6-209ENST00000527840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.12
SOX6-209ENST00000527840 KCNA4P22459 653 aa15.45■□□□□ 0.06
SOX6-209ENST00000527840 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
SOX6-209ENST00000527840 CAPN15O75808 1086 aa15.21■□□□□ 0.03
SOX6-209ENST00000527840 SPINK5Q9NQ38 1064 aaPredicted RBP15.21■□□□□ 0.03
SOX6-209ENST00000527840 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
SOX6-209ENST00000527840 DSG3P32926 999 aa15.17■□□□□ 0.02
SOX6-209ENST00000527840 APLP2Q06481 763 aa15.11■□□□□ 0.01
SOX6-209ENST00000527840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
SOX6-209ENST00000527840 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
SOX6-209ENST00000527840 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
SOX6-209ENST00000527840 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
SOX6-209ENST00000527840 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
SOX6-209ENST00000527840 ABCB7O75027 752 aa14.81□□□□□ -0.04
SOX6-209ENST00000527840 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
SOX6-209ENST00000527840 POTEHQ6S545 545 aa14.7□□□□□ -0.06
SOX6-209ENST00000527840 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
SOX6-209ENST00000527840 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
SOX6-209ENST00000527840 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
SOX6-209ENST00000527840 POLA2Q14181 598 aa14.5□□□□□ -0.09
SOX6-209ENST00000527840 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
SOX6-209ENST00000527840 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
SOX6-209ENST00000527840 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
SOX6-209ENST00000527840 ZBTB22O15209 634 aa14.18□□□□□ -0.14
SOX6-209ENST00000527840 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
SOX6-209ENST00000527840 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
SOX6-209ENST00000527840 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
SOX6-209ENST00000527840 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
SOX6-209ENST00000527840 FBLN2P98095 1184 aa13.87□□□□□ -0.19
SOX6-209ENST00000527840 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
SOX6-209ENST00000527840 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
SOX6-209ENST00000527840 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
SOX6-209ENST00000527840 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
SOX6-209ENST00000527840 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
SOX6-209ENST00000527840 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
SOX6-209ENST00000527840 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
SOX6-209ENST00000527840 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
SOX6-209ENST00000527840 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
SOX6-209ENST00000527840 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
SOX6-209ENST00000527840 HAX1O00165 279 aa13.6□□□□□ -0.23
SOX6-209ENST00000527840 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
SOX6-209ENST00000527840 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
SOX6-209ENST00000527840 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
SOX6-209ENST00000527840 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
SOX6-209ENST00000527840 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
SOX6-209ENST00000527840 EVX2Q03828 476 aa13.36□□□□□ -0.27
SOX6-209ENST00000527840 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
SOX6-209ENST00000527840 PRR29P0C7W0 189 aa13.31□□□□□ -0.28
SOX6-209ENST00000527840 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
SOX6-209ENST00000527840 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
SOX6-209ENST00000527840 GABBR2O75899 941 aa13.12□□□□□ -0.31
SOX6-209ENST00000527840 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
SOX6-209ENST00000527840 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
SOX6-209ENST00000527840 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
SOX6-209ENST00000527840 CLCN6P51797 869 aa13.02□□□□□ -0.33
SOX6-209ENST00000527840 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
SOX6-209ENST00000527840 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
SOX6-209ENST00000527840 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
SOX6-209ENST00000527840 LHX8Q68G74 356 aa12.87□□□□□ -0.35
SOX6-209ENST00000527840 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
SOX6-209ENST00000527840 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
SOX6-209ENST00000527840 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
SOX6-209ENST00000527840 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
SOX6-209ENST00000527840 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
SOX6-209ENST00000527840 PROM2Q8N271 834 aa12.72□□□□□ -0.37
SOX6-209ENST00000527840 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
SOX6-209ENST00000527840 GALR2O43603 387 aaPredicted RBP12.67□□□□□ -0.38
SOX6-209ENST00000527840 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
SOX6-209ENST00000527840 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
SOX6-209ENST00000527840 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
SOX6-209ENST00000527840 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
SOX6-209ENST00000527840 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
SOX6-209ENST00000527840 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
SOX6-209ENST00000527840 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
SOX6-209ENST00000527840 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms