RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 PLCH2O75038 1416 aa11.66□□□□□ -0.54
CTNND1-215ENST00000526938 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
CTNND1-215ENST00000526938 ABCC2Q92887 1545 aa11.66□□□□□ -0.54
CTNND1-215ENST00000526938 TMF1P82094 1093 aa11.65□□□□□ -0.54
CTNND1-215ENST00000526938 KANK1Q14678 1352 aa11.65□□□□□ -0.54
CTNND1-215ENST00000526938 PANK3Q9H999 370 aa11.65□□□□□ -0.54
CTNND1-215ENST00000526938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.65□□□□□ -0.54
CTNND1-215ENST00000526938 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
CTNND1-215ENST00000526938 SAMD9LQ8IVG5 1584 aa11.63□□□□□ -0.55
CTNND1-215ENST00000526938 TTC37Q6PGP7 1564 aa11.62□□□□□ -0.55
CTNND1-215ENST00000526938 WASHC2CQ9Y4E1 1318 aa11.62□□□□□ -0.55
CTNND1-215ENST00000526938 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
CTNND1-215ENST00000526938 FAM135AQ9P2D6 1515 aa11.62□□□□□ -0.55
CTNND1-215ENST00000526938 ARHGEF12Q9NZN5 1544 aa11.61□□□□□ -0.55
CTNND1-215ENST00000526938 SAFB2Q14151 953 aaKnown RBP eCLIP11.61□□□□□ -0.55
CTNND1-215ENST00000526938 MLECQ14165 292 aa11.61□□□□□ -0.55
CTNND1-215ENST00000526938 CFAP70Q5T0N1 1121 aa11.61□□□□□ -0.55
CTNND1-215ENST00000526938 KNSTRNQ9Y448 316 aa11.61□□□□□ -0.55
CTNND1-215ENST00000526938 B4GALNT3Q6L9W6 998 aa11.61□□□□□ -0.55
CTNND1-215ENST00000526938 PLPPR3Q6T4P5 718 aa11.61□□□□□ -0.55
CTNND1-215ENST00000526938 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
CTNND1-215ENST00000526938 FANCAO15360 1455 aa11.6□□□□□ -0.55
CTNND1-215ENST00000526938 ASXL2Q76L83 1435 aa11.6□□□□□ -0.55
CTNND1-215ENST00000526938 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
CTNND1-215ENST00000526938 TNNT2P45379 298 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-215ENST00000526938 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
CTNND1-215ENST00000526938 TRAK1Q9UPV9 953 aa11.59□□□□□ -0.55
CTNND1-215ENST00000526938 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
CTNND1-215ENST00000526938 ADCY10Q96PN6 1610 aa11.58□□□□□ -0.56
CTNND1-215ENST00000526938 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
CTNND1-215ENST00000526938 TMEM132EQ6IEE7 984 aa11.57□□□□□ -0.56
CTNND1-215ENST00000526938 RALBP1Q15311 655 aa11.57□□□□□ -0.56
CTNND1-215ENST00000526938 KTN1Q86UP2 1357 aaKnown RBP11.57□□□□□ -0.56
CTNND1-215ENST00000526938 STK26Q9P289 416 aa11.56□□□□□ -0.56
CTNND1-215ENST00000526938 WDR7Q9Y4E6 1490 aa11.56□□□□□ -0.56
CTNND1-215ENST00000526938 FAM69CQ0P6D2 419 aa11.56□□□□□ -0.56
CTNND1-215ENST00000526938 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
CTNND1-215ENST00000526938 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
CTNND1-215ENST00000526938 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
CTNND1-215ENST00000526938 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
CTNND1-215ENST00000526938 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
CTNND1-215ENST00000526938 CD109Q6YHK3 1445 aa11.55□□□□□ -0.56
CTNND1-215ENST00000526938 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
CTNND1-215ENST00000526938 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
CTNND1-215ENST00000526938 PLA2R1Q13018 1463 aa11.54□□□□□ -0.56
CTNND1-215ENST00000526938 CDC42BPBQ9Y5S2 1711 aa11.54□□□□□ -0.56
CTNND1-215ENST00000526938 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.563e-9■■■□□ 15.6
CTNND1-215ENST00000526938 ARHGEF5Q12774 1597 aa11.54□□□□□ -0.56
CTNND1-215ENST00000526938 PRAG1Q86YV5 1406 aa11.54□□□□□ -0.56
CTNND1-215ENST00000526938 ADGRF5Q8IZF2 1346 aa11.53□□□□□ -0.56
CTNND1-215ENST00000526938 DHX29Q7Z478 1369 aaKnown RBP11.53□□□□□ -0.56
CTNND1-215ENST00000526938 DISP3Q9P2K9 1392 aa11.53□□□□□ -0.56
CTNND1-215ENST00000526938 RALGAPBQ86X10 1494 aa11.53□□□□□ -0.56
CTNND1-215ENST00000526938 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
CTNND1-215ENST00000526938 TESK2Q96S53 571 aa11.53□□□□□ -0.56
CTNND1-215ENST00000526938 PREX2Q70Z35 1606 aa11.53□□□□□ -0.56
CTNND1-215ENST00000526938 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.56
CTNND1-215ENST00000526938 A2MP01023 1474 aa11.52□□□□□ -0.57
CTNND1-215ENST00000526938 ZCCHC11Q5TAX3 1644 aaKnown RBP11.52□□□□□ -0.57
CTNND1-215ENST00000526938 UHRF1BP1Q6BDS2 1440 aa11.51□□□□□ -0.57
CTNND1-215ENST00000526938 CCDC136Q96JN2 1154 aa11.51□□□□□ -0.57
CTNND1-215ENST00000526938 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
CTNND1-215ENST00000526938 ERBINQ96RT1 1412 aa11.5□□□□□ -0.57
CTNND1-215ENST00000526938 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
CTNND1-215ENST00000526938 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
CTNND1-215ENST00000526938 UHRF1BP1LA0JNW5 1464 aa11.49□□□□□ -0.57
CTNND1-215ENST00000526938 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
CTNND1-215ENST00000526938 CDCA7LQ96GN5 454 aa11.49□□□□□ -0.57
CTNND1-215ENST00000526938 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
CTNND1-215ENST00000526938 CROCC2H7BZ55 1655 aa11.48□□□□□ -0.57
CTNND1-215ENST00000526938 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
CTNND1-215ENST00000526938 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
CTNND1-215ENST00000526938 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
CTNND1-215ENST00000526938 MYO5CQ9NQX4 1742 aa11.48□□□□□ -0.57
CTNND1-215ENST00000526938 PER1O15534 1290 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-215ENST00000526938 ADAMTS8Q9UP79 889 aa11.46□□□□□ -0.57
CTNND1-215ENST00000526938 RBM19Q9Y4C8 960 aaKnown RBP11.46□□□□□ -0.58
CTNND1-215ENST00000526938 ABCC1P33527 1531 aa11.45□□□□□ -0.58
CTNND1-215ENST00000526938 PLIN1O60240 522 aa11.45□□□□□ -0.58
CTNND1-215ENST00000526938 SLC12A5Q9H2X9 1139 aa11.45□□□□□ -0.58
CTNND1-215ENST00000526938 BCORL1Q5H9F3 1711 aa11.44□□□□□ -0.58
CTNND1-215ENST00000526938 RTEL1-TNFRSF6BF6WH68 1400 aa11.44□□□□□ -0.58
CTNND1-215ENST00000526938 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
CTNND1-215ENST00000526938 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-215ENST00000526938 POGKQ9P215 609 aa11.44□□□□□ -0.58
CTNND1-215ENST00000526938 BRD4O60885 1362 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-215ENST00000526938 RCAN3Q9UKA8 241 aa11.44□□□□□ -0.58
CTNND1-215ENST00000526938 KDM5DQ9BY66 1539 aa11.43□□□□□ -0.58
CTNND1-215ENST00000526938 IDI1Q13907 227 aa11.43□□□□□ -0.58
CTNND1-215ENST00000526938 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
CTNND1-215ENST00000526938 EIF3AQ14152 1382 aaKnown RBP11.43□□□□□ -0.58
CTNND1-215ENST00000526938 PPP2R1AP30153 589 aa11.43□□□□□ -0.58
CTNND1-215ENST00000526938 CENPJQ9HC77 1338 aaPredicted RBP11.43□□□□□ -0.58
CTNND1-215ENST00000526938 KDM5CP41229 1560 aa11.42□□□□□ -0.58
CTNND1-215ENST00000526938 ATP7AQ04656 1500 aa11.42□□□□□ -0.58
CTNND1-215ENST00000526938 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
CTNND1-215ENST00000526938 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
CTNND1-215ENST00000526938 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
CTNND1-215ENST00000526938 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
CTNND1-215ENST00000526938 UGGT1Q9NYU2 1555 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms