RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
LINC01001-201ENST00000526704 MAST1Q9Y2H9 1570 aa15.87■□□□□ 0.13
LINC01001-201ENST00000526704 TTC37Q6PGP7 1564 aa15.86■□□□□ 0.13
LINC01001-201ENST00000526704 B4GALNT3Q6L9W6 998 aa15.86■□□□□ 0.13
LINC01001-201ENST00000526704 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
LINC01001-201ENST00000526704 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
LINC01001-201ENST00000526704 PNISRQ8TF01 805 aaKnown RBP15.83■□□□□ 0.12
LINC01001-201ENST00000526704 RNF123Q5XPI4 1314 aa15.83■□□□□ 0.12
LINC01001-201ENST00000526704 ST20-MTHFSA0A0A6YYL1 179 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 PLXNC1O60486 1568 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 KDM2AQ9Y2K7 1162 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 LAMC1P11047 1609 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 IQGAP3Q86VI3 1631 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 SHROOM2Q13796 1616 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 PRAG1Q86YV5 1406 aa15.82■□□□□ 0.12
LINC01001-201ENST00000526704 LRPPRCP42704 1394 aaKnown RBP15.81■□□□□ 0.12
LINC01001-201ENST00000526704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.81■□□□□ 0.12
LINC01001-201ENST00000526704 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
LINC01001-201ENST00000526704 ARHGAP5Q13017 1502 aa15.79■□□□□ 0.12
LINC01001-201ENST00000526704 BRD4O60885 1362 aaPredicted RBP15.79■□□□□ 0.12
LINC01001-201ENST00000526704 CCDC144AA2RUR9 1427 aa15.79■□□□□ 0.12
LINC01001-201ENST00000526704 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
LINC01001-201ENST00000526704 TMC1Q8TDI8 760 aa15.78■□□□□ 0.12
LINC01001-201ENST00000526704 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
LINC01001-201ENST00000526704 A2MP01023 1474 aa15.78■□□□□ 0.12
LINC01001-201ENST00000526704 MYBBP1AQ9BQG0 1328 aaKnown RBP15.78■□□□□ 0.12
LINC01001-201ENST00000526704 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
LINC01001-201ENST00000526704 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
LINC01001-201ENST00000526704 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
LINC01001-201ENST00000526704 RALBP1Q15311 655 aa15.75■□□□□ 0.11
LINC01001-201ENST00000526704 GPRASP1Q5JY77 1395 aa15.75■□□□□ 0.11
LINC01001-201ENST00000526704 MAGI2Q86UL8 1455 aa15.75■□□□□ 0.11
LINC01001-201ENST00000526704 COL17A1Q9UMD9 1497 aaPredicted RBP15.75■□□□□ 0.11
LINC01001-201ENST00000526704 RNF17Q9BXT8 1623 aaKnown RBP15.75■□□□□ 0.11
LINC01001-201ENST00000526704 ABCC2Q92887 1545 aa15.74■□□□□ 0.11
LINC01001-201ENST00000526704 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
LINC01001-201ENST00000526704 ERCC6L2Q5T890 1561 aa15.73■□□□□ 0.11
LINC01001-201ENST00000526704 DUOX2Q9NRD8 1548 aa15.72■□□□□ 0.11
LINC01001-201ENST00000526704 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
LINC01001-201ENST00000526704 NBPF1Q3BBV0 1214 aa15.7■□□□□ 0.1
LINC01001-201ENST00000526704 ATP10AO60312 1499 aa15.7■□□□□ 0.1
LINC01001-201ENST00000526704 ZCCHC11Q5TAX3 1644 aaKnown RBP15.68■□□□□ 0.1
LINC01001-201ENST00000526704 DISP3Q9P2K9 1392 aa15.68■□□□□ 0.1
LINC01001-201ENST00000526704 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
LINC01001-201ENST00000526704 RGL3Q3MIN7 710 aa15.68■□□□□ 0.1
LINC01001-201ENST00000526704 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
LINC01001-201ENST00000526704 CCDC136Q96JN2 1154 aa15.68■□□□□ 0.1
LINC01001-201ENST00000526704 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
LINC01001-201ENST00000526704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC01001-201ENST00000526704 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
LINC01001-201ENST00000526704 ABCC1P33527 1531 aa15.66■□□□□ 0.1
LINC01001-201ENST00000526704 IQGAP1P46940 1657 aa15.66■□□□□ 0.1
LINC01001-201ENST00000526704 TESK2Q96S53 571 aa15.65■□□□□ 0.1
LINC01001-201ENST00000526704 MADDQ8WXG6 1647 aa15.65■□□□□ 0.1
LINC01001-201ENST00000526704 CEP152O94986 1710 aa15.65■□□□□ 0.1
LINC01001-201ENST00000526704 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
LINC01001-201ENST00000526704 ZMYM4Q5VZL5 1548 aa15.64■□□□□ 0.09
LINC01001-201ENST00000526704 RRP1P56182 461 aaKnown RBP15.63■□□□□ 0.09
LINC01001-201ENST00000526704 BLMP54132 1417 aaPredicted RBP15.63■□□□□ 0.09
LINC01001-201ENST00000526704 PLCH2O75038 1416 aa15.62■□□□□ 0.09
LINC01001-201ENST00000526704 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
LINC01001-201ENST00000526704 INSRP06213 1382 aa15.6■□□□□ 0.09
LINC01001-201ENST00000526704 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
LINC01001-201ENST00000526704 RCAN3Q9UKA8 241 aa15.59■□□□□ 0.09
LINC01001-201ENST00000526704 TRPM2O94759 1503 aa15.59■□□□□ 0.09
LINC01001-201ENST00000526704 PDE3BQ13370 1112 aa15.58■□□□□ 0.09
LINC01001-201ENST00000526704 TRAPPC8Q9Y2L5 1435 aa15.58■□□□□ 0.08
LINC01001-201ENST00000526704 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.08
LINC01001-201ENST00000526704 CC2D1BQ5T0F9 858 aaKnown RBP15.58■□□□□ 0.08
LINC01001-201ENST00000526704 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
LINC01001-201ENST00000526704 PANK3Q9H999 370 aa15.57■□□□□ 0.08
LINC01001-201ENST00000526704 SALL2Q9Y467 1007 aaPredicted RBP15.57■□□□□ 0.08
LINC01001-201ENST00000526704 MYOM1P52179 1685 aa15.57■□□□□ 0.08
LINC01001-201ENST00000526704 CLASP1Q7Z460 1538 aa15.57■□□□□ 0.08
LINC01001-201ENST00000526704 UHRF1BP1LA0JNW5 1464 aa15.57■□□□□ 0.08
LINC01001-201ENST00000526704 EXOC6Q8TAG9 804 aa15.56■□□□□ 0.08
LINC01001-201ENST00000526704 WDR7Q9Y4E6 1490 aa15.56■□□□□ 0.08
LINC01001-201ENST00000526704 TMF1P82094 1093 aa15.56■□□□□ 0.08
LINC01001-201ENST00000526704 NOP58Q9Y2X3 529 aaKnown RBP15.56■□□□□ 0.08
LINC01001-201ENST00000526704 SYNMO15061 1565 aa15.56■□□□□ 0.08
LINC01001-201ENST00000526704 TET3O43151 1660 aa15.55■□□□□ 0.08
LINC01001-201ENST00000526704 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
LINC01001-201ENST00000526704 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
LINC01001-201ENST00000526704 EFCAB2Q5VUJ9 269 aa15.53■□□□□ 0.08
LINC01001-201ENST00000526704 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.08
LINC01001-201ENST00000526704 PAK3O75914 559 aaPredicted RBP15.52■□□□□ 0.08
LINC01001-201ENST00000526704 INO80Q9ULG1 1556 aaPredicted RBP15.52■□□□□ 0.07
LINC01001-201ENST00000526704 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
LINC01001-201ENST00000526704 PTPRTO14522 1441 aa15.51■□□□□ 0.07
LINC01001-201ENST00000526704 VWDEQ8N2E2 1590 aa15.5■□□□□ 0.07
LINC01001-201ENST00000526704 KDM5AP29375 1690 aaKnown RBP15.49■□□□□ 0.07
LINC01001-201ENST00000526704 SCAF11Q99590 1463 aaKnown RBP15.49■□□□□ 0.07
LINC01001-201ENST00000526704 ABCA9Q8IUA7 1624 aa15.49■□□□□ 0.07
LINC01001-201ENST00000526704 ANP32AP39687 249 aaKnown RBP15.49■□□□□ 0.07
LINC01001-201ENST00000526704 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
LINC01001-201ENST00000526704 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
LINC01001-201ENST00000526704 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
LINC01001-201ENST00000526704 SPAG9O60271 1321 aaKnown RBP15.47■□□□□ 0.07
LINC01001-201ENST00000526704 IFT172Q9UG01 1749 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms