RNA–Protein interactions for RNA: ENST00000525528.1

BDNF-212, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 BASIC

Gene BDNF, Length 4,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-212ENST00000525528 CEP89Q96ST8 783 aa8.84□□□□□ -1
BDNF-212ENST00000525528 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -1
BDNF-212ENST00000525528 NEXNQ0ZGT2 675 aa8.83□□□□□ -1
BDNF-212ENST00000525528 LRRFIP1Q32MZ4 808 aaKnown RBP8.83□□□□□ -1
BDNF-212ENST00000525528 HNRNPMP52272 730 aaKnown RBP eCLIP8.83□□□□□ -1
BDNF-212ENST00000525528 VSIG10Q8N0Z9 540 aa8.83□□□□□ -1
BDNF-212ENST00000525528 NUTM2DQ5VT03 806 aaPredicted RBP8.83□□□□□ -1
BDNF-212ENST00000525528 COG3Q96JB2 828 aa8.83□□□□□ -1
BDNF-212ENST00000525528 APBB1O00213 710 aa8.82□□□□□ -1
BDNF-212ENST00000525528 WIZO95785 1651 aa8.82□□□□□ -1
BDNF-212ENST00000525528 SMARCA2P51531 1590 aa8.82□□□□□ -1
BDNF-212ENST00000525528 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
BDNF-212ENST00000525528 RAPGEF4Q8WZA2 1011 aa8.82□□□□□ -1
BDNF-212ENST00000525528 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
BDNF-212ENST00000525528 VPS8Q8N3P4 1428 aa8.82□□□□□ -1
BDNF-212ENST00000525528 IRX6P78412 446 aaPredicted RBP8.81□□□□□ -1
BDNF-212ENST00000525528 NAP1L5Q96NT1 182 aaPredicted RBP8.81□□□□□ -1
BDNF-212ENST00000525528 VPS37DQ86XT2 251 aa8.81□□□□□ -1
BDNF-212ENST00000525528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.81□□□□□ -1
BDNF-212ENST00000525528 KIF3AQ9Y496 699 aa8.81□□□□□ -1
BDNF-212ENST00000525528 PPP1R1BQ9UD71 204 aaPredicted RBP8.81□□□□□ -1
BDNF-212ENST00000525528 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
BDNF-212ENST00000525528 CCAR1Q8IX12 1150 aaKnown RBP8.81□□□□□ -1
BDNF-212ENST00000525528 SMC4Q9NTJ3 1288 aa8.81□□□□□ -1
BDNF-212ENST00000525528 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
BDNF-212ENST00000525528 UACAQ9BZF9 1416 aa8.8□□□□□ -1
BDNF-212ENST00000525528 CHMP4CQ96CF2 233 aa8.8□□□□□ -1
BDNF-212ENST00000525528 ROCK2O75116 1388 aaKnown RBP8.8□□□□□ -1
BDNF-212ENST00000525528 SLC4A10Q6U841 1118 aa8.8□□□□□ -1
BDNF-212ENST00000525528 TRAK1Q9UPV9 953 aa8.8□□□□□ -1
BDNF-212ENST00000525528 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
BDNF-212ENST00000525528 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
BDNF-212ENST00000525528 RSPH6AQ9H0K4 717 aa8.79□□□□□ -1
BDNF-212ENST00000525528 FBXW7Q969H0 707 aa8.79□□□□□ -1
BDNF-212ENST00000525528 HSCBQ8IWL3 235 aa8.78□□□□□ -1
BDNF-212ENST00000525528 ARHGAP35Q9NRY4 1499 aa8.78□□□□□ -1
BDNF-212ENST00000525528 RAD21O60216 631 aa8.78□□□□□ -1
BDNF-212ENST00000525528 SIN3AQ96ST3 1273 aa8.78□□□□□ -1
BDNF-212ENST00000525528 AKAP17AQ02040 695 aaKnown RBP8.78□□□□□ -1
BDNF-212ENST00000525528 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1.01
BDNF-212ENST00000525528 DDX58O95786 925 aaKnown RBP8.77□□□□□ -1.01
BDNF-212ENST00000525528 EVC2Q86UK5 1308 aa8.77□□□□□ -1.01
BDNF-212ENST00000525528 CPLX2Q6PUV4 134 aaKnown RBP8.76□□□□□ -1.01
BDNF-212ENST00000525528 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
BDNF-212ENST00000525528 NLRP2Q9NX02 1062 aa8.76□□□□□ -1.01
BDNF-212ENST00000525528 ITPRIPQ8IWB1 547 aa8.76□□□□□ -1.01
BDNF-212ENST00000525528 WDHD1O75717 1129 aaPredicted RBP8.76□□□□□ -1.01
BDNF-212ENST00000525528 TRIM6-TRIM34B2RNG4 842 aa8.75□□□□□ -1.01
BDNF-212ENST00000525528 THEMISQ8N1K5 641 aaPredicted RBP8.75□□□□□ -1.01
BDNF-212ENST00000525528 RWDD1Q9H446 243 aaPredicted RBP8.75□□□□□ -1.01
BDNF-212ENST00000525528 NOC3LQ8WTT2 800 aaKnown RBP8.75□□□□□ -1.01
BDNF-212ENST00000525528 CCDC43Q96MW1 224 aaKnown RBP8.75□□□□□ -1.01
BDNF-212ENST00000525528 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
BDNF-212ENST00000525528 TOP2AP11388 1531 aaKnown RBP8.75□□□□□ -1.01
BDNF-212ENST00000525528 TPM4P67936 248 aa8.74□□□□□ -1.01
BDNF-212ENST00000525528 R3HCC1Q9Y3T6 440 aaKnown RBP8.74□□□□□ -1.01
BDNF-212ENST00000525528 GPRASP1Q5JY77 1395 aa8.74□□□□□ -1.01
BDNF-212ENST00000525528 DHX16O60231 1041 aaKnown RBP8.74□□□□□ -1.01
BDNF-212ENST00000525528 RALBP1Q15311 655 aa8.74□□□□□ -1.01
BDNF-212ENST00000525528 MPHOSPH9Q99550 1183 aa8.74□□□□□ -1.01
BDNF-212ENST00000525528 NGEFQ8N5V2 710 aa8.73□□□□□ -1.01
BDNF-212ENST00000525528 A0A0U1RQG5 324 aaPredicted RBP8.73□□□□□ -1.01
BDNF-212ENST00000525528 NUTM2BA6NNL0 878 aaPredicted RBP8.73□□□□□ -1.01
BDNF-212ENST00000525528 NUTM2EB1AL46 878 aaPredicted RBP8.73□□□□□ -1.01
BDNF-212ENST00000525528 NUTM2AQ8IVF1 878 aaPredicted RBP8.73□□□□□ -1.01
BDNF-212ENST00000525528 DRC7Q8IY82 874 aa8.73□□□□□ -1.01
BDNF-212ENST00000525528 C9orf78Q9NZ63 289 aaPredicted RBP8.73□□□□□ -1.01
BDNF-212ENST00000525528 RUSC2Q8N2Y8 1516 aa8.72□□□□□ -1.01
BDNF-212ENST00000525528 MINK1Q8N4C8 1332 aaPredicted RBP8.72□□□□□ -1.01
BDNF-212ENST00000525528 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
BDNF-212ENST00000525528 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
BDNF-212ENST00000525528 HSP90AA2PQ14568 343 aaPredicted RBP8.72□□□□□ -1.01
BDNF-212ENST00000525528 CGNL1Q0VF96 1302 aa8.71□□□□□ -1.01
BDNF-212ENST00000525528 PDE3BQ13370 1112 aa8.71□□□□□ -1.01
BDNF-212ENST00000525528 USP35Q9P2H5 1018 aa8.71□□□□□ -1.01
BDNF-212ENST00000525528 TXNDC2Q86VQ3 553 aa8.71□□□□□ -1.02
BDNF-212ENST00000525528 POGZQ7Z3K3 1410 aa8.71□□□□□ -1.02
BDNF-212ENST00000525528 FANCIQ9NVI1 1328 aa8.7□□□□□ -1.02
BDNF-212ENST00000525528 SF3A1Q15459 793 aaKnown RBP8.7□□□□□ -1.02
BDNF-212ENST00000525528 DMRT2Q9Y5R5 561 aa8.7□□□□□ -1.02
BDNF-212ENST00000525528 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
BDNF-212ENST00000525528 ANKLE2Q86XL3 938 aa8.7□□□□□ -1.02
BDNF-212ENST00000525528 EIF2S2P20042 333 aaKnown RBP8.69□□□□□ -1.02
BDNF-212ENST00000525528 SETD5Q9C0A6 1442 aa8.69□□□□□ -1.02
BDNF-212ENST00000525528 SAMD1Q6SPF0 538 aaPredicted RBP8.69□□□□□ -1.02
BDNF-212ENST00000525528 DHX57Q6P158 1386 aaKnown RBP8.69□□□□□ -1.02
BDNF-212ENST00000525528 CSPP1Q1MSJ5 1256 aa8.69□□□□□ -1.02
BDNF-212ENST00000525528 CCDC47Q96A33 483 aaKnown RBP8.69□□□□□ -1.02
BDNF-212ENST00000525528 NLRP6P59044 892 aa8.69□□□□□ -1.02
BDNF-212ENST00000525528 TRDNQ13061 729 aa8.69□□□□□ -1.02
BDNF-212ENST00000525528 STAC3Q96MF2 364 aa8.69□□□□□ -1.02
BDNF-212ENST00000525528 PDE4CQ08493 712 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 WWC2Q6AWC2 1192 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 CCER2I3L3R5 266 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 APPP05067 770 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 PMFBP1Q8TBY8 1022 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 PPP4R2Q9NY27 417 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 STRN4Q9NRL3 753 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 KIF16BQ96L93 1317 aa8.68□□□□□ -1.02
BDNF-212ENST00000525528 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms