RNA–Protein interactions for RNA: ENST00000525060.1

IFT46-203, Transcript of intraflagellar transport 46, humanhuman

TSL 5

Gene IFT46, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-203ENST00000525060 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
IFT46-203ENST00000525060 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
IFT46-203ENST00000525060 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
IFT46-203ENST00000525060 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
IFT46-203ENST00000525060 TK2O00142 265 aa12.83□□□□□ -0.36
IFT46-203ENST00000525060 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.36
IFT46-203ENST00000525060 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
IFT46-203ENST00000525060 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
IFT46-203ENST00000525060 NCAPD3P42695 1498 aa12.8□□□□□ -0.36
IFT46-203ENST00000525060 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
IFT46-203ENST00000525060 E2F4Q16254 413 aa12.8□□□□□ -0.36
IFT46-203ENST00000525060 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
IFT46-203ENST00000525060 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
IFT46-203ENST00000525060 HRO43593 1189 aa12.79□□□□□ -0.36
IFT46-203ENST00000525060 PDIA6Q15084 440 aa12.79□□□□□ -0.36
IFT46-203ENST00000525060 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
IFT46-203ENST00000525060 PHF14O94880 888 aa12.78□□□□□ -0.36
IFT46-203ENST00000525060 PTPREP23469 700 aa12.78□□□□□ -0.36
IFT46-203ENST00000525060 ARIH1Q9Y4X5 557 aaPredicted RBP12.78□□□□□ -0.36
IFT46-203ENST00000525060 WDR70Q9NW82 654 aa12.77□□□□□ -0.37
IFT46-203ENST00000525060 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
IFT46-203ENST00000525060 SLC4A5Q9BY07 1137 aa12.75□□□□□ -0.37
IFT46-203ENST00000525060 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
IFT46-203ENST00000525060 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
IFT46-203ENST00000525060 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
IFT46-203ENST00000525060 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
IFT46-203ENST00000525060 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.37
IFT46-203ENST00000525060 EPAS1Q99814 870 aa12.71□□□□□ -0.37
IFT46-203ENST00000525060 DDX12PQ92771 950 aa12.7□□□□□ -0.38
IFT46-203ENST00000525060 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
IFT46-203ENST00000525060 PLCB2Q00722 1185 aa12.68□□□□□ -0.38
IFT46-203ENST00000525060 COL9A1P20849 921 aa12.66□□□□□ -0.38
IFT46-203ENST00000525060 BHMG1C9JSJ3 638 aaPredicted RBP12.65□□□□□ -0.38
IFT46-203ENST00000525060 NBR1Q14596 966 aa12.64□□□□□ -0.39
IFT46-203ENST00000525060 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
IFT46-203ENST00000525060 C6orf132Q5T0Z8 1188 aa12.63□□□□□ -0.39
IFT46-203ENST00000525060 CCDC88BA6NC98 1476 aa12.62□□□□□ -0.39
IFT46-203ENST00000525060 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
IFT46-203ENST00000525060 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
IFT46-203ENST00000525060 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
IFT46-203ENST00000525060 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
IFT46-203ENST00000525060 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
IFT46-203ENST00000525060 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
IFT46-203ENST00000525060 KCTD12Q96CX2 325 aaKnown RBP12.57□□□□□ -0.4
IFT46-203ENST00000525060 RABGEF1Q9UJ41 708 aa12.57□□□□□ -0.4
IFT46-203ENST00000525060 MAP3K7O43318 606 aa12.56□□□□□ -0.4
IFT46-203ENST00000525060 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
IFT46-203ENST00000525060 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
IFT46-203ENST00000525060 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
IFT46-203ENST00000525060 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
IFT46-203ENST00000525060 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
IFT46-203ENST00000525060 OSBPP22059 807 aa12.53□□□□□ -0.4
IFT46-203ENST00000525060 NESP48681 1621 aa12.52□□□□□ -0.4
IFT46-203ENST00000525060 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
IFT46-203ENST00000525060 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
IFT46-203ENST00000525060 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
IFT46-203ENST00000525060 THSD4Q6ZMP0 1018 aa12.49□□□□□ -0.41
IFT46-203ENST00000525060 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
IFT46-203ENST00000525060 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
IFT46-203ENST00000525060 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
IFT46-203ENST00000525060 LAPTM4BQ86VI4 370 aa12.47□□□□□ -0.41
IFT46-203ENST00000525060 WNT2BQ93097 391 aa12.47□□□□□ -0.41
IFT46-203ENST00000525060 GOLGA8CPA6NN73 597 aa12.46□□□□□ -0.41
IFT46-203ENST00000525060 MLLT3P42568 568 aaPredicted RBP12.46□□□□□ -0.41
IFT46-203ENST00000525060 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
IFT46-203ENST00000525060 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
IFT46-203ENST00000525060 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
IFT46-203ENST00000525060 KIF21AQ7Z4S6 1674 aa12.43□□□□□ -0.42
IFT46-203ENST00000525060 ERCC6Q03468 1493 aa12.43□□□□□ -0.42
IFT46-203ENST00000525060 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
IFT46-203ENST00000525060 CFTRP13569 1480 aa12.42□□□□□ -0.42
IFT46-203ENST00000525060 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
IFT46-203ENST00000525060 PRSS12P56730 875 aa12.42□□□□□ -0.42
IFT46-203ENST00000525060 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
IFT46-203ENST00000525060 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
IFT46-203ENST00000525060 PTPN5P54829 565 aa12.41□□□□□ -0.42
IFT46-203ENST00000525060 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
IFT46-203ENST00000525060 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
IFT46-203ENST00000525060 ZFRQ96KR1 1074 aaKnown RBP12.4□□□□□ -0.42
IFT46-203ENST00000525060 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
IFT46-203ENST00000525060 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
IFT46-203ENST00000525060 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
IFT46-203ENST00000525060 PACS2Q86VP3 889 aa12.38□□□□□ -0.43
IFT46-203ENST00000525060 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
IFT46-203ENST00000525060 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
IFT46-203ENST00000525060 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
IFT46-203ENST00000525060 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
IFT46-203ENST00000525060 BCAMP50895 628 aa12.36□□□□□ -0.43
IFT46-203ENST00000525060 SEMA3EO15041 775 aa12.35□□□□□ -0.43
IFT46-203ENST00000525060 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
IFT46-203ENST00000525060 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
IFT46-203ENST00000525060 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
IFT46-203ENST00000525060 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
IFT46-203ENST00000525060 NBPF26B4DH59 902 aa12.32□□□□□ -0.44
IFT46-203ENST00000525060 CUX2O14529 1486 aa12.32□□□□□ -0.44
IFT46-203ENST00000525060 SMAPO00193 183 aa12.31□□□□□ -0.44
IFT46-203ENST00000525060 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
IFT46-203ENST00000525060 TATDN2Q93075 761 aa12.3□□□□□ -0.44
IFT46-203ENST00000525060 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
IFT46-203ENST00000525060 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms