RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
HDAC2-216ENST00000523628 THSD4Q6ZMP0 1018 aa9.35□□□□□ -0.91
HDAC2-216ENST00000523628 DPYSL4O14531 572 aa9.34□□□□□ -0.91
HDAC2-216ENST00000523628 WNT2BQ93097 391 aa9.34□□□□□ -0.91
HDAC2-216ENST00000523628 COL9A1P20849 921 aa9.33□□□□□ -0.92
HDAC2-216ENST00000523628 EPAS1Q99814 870 aa9.33□□□□□ -0.92
HDAC2-216ENST00000523628 RABGEF1Q9UJ41 708 aa9.33□□□□□ -0.92
HDAC2-216ENST00000523628 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
HDAC2-216ENST00000523628 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
HDAC2-216ENST00000523628 C6orf132Q5T0Z8 1188 aa9.3□□□□□ -0.92
HDAC2-216ENST00000523628 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
HDAC2-216ENST00000523628 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
HDAC2-216ENST00000523628 IFFO2Q5TF58 517 aa9.26□□□□□ -0.93
HDAC2-216ENST00000523628 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
HDAC2-216ENST00000523628 DDX12PQ92771 950 aa9.26□□□□□ -0.93
HDAC2-216ENST00000523628 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
HDAC2-216ENST00000523628 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
HDAC2-216ENST00000523628 PDIA6Q15084 440 aa9.24□□□□□ -0.93
HDAC2-216ENST00000523628 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
HDAC2-216ENST00000523628 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
HDAC2-216ENST00000523628 TRIM6-TRIM34B2RNG4 842 aa9.23□□□□□ -0.93
HDAC2-216ENST00000523628 PAXIP1Q6ZW49 1069 aaPredicted RBP9.22□□□□□ -0.93
HDAC2-216ENST00000523628 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
HDAC2-216ENST00000523628 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
HDAC2-216ENST00000523628 EN1Q05925 392 aaPredicted RBP9.21□□□□□ -0.94
HDAC2-216ENST00000523628 NBR1Q14596 966 aa9.21□□□□□ -0.94
HDAC2-216ENST00000523628 E2F4Q16254 413 aa9.21□□□□□ -0.94
HDAC2-216ENST00000523628 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
HDAC2-216ENST00000523628 CFAP44Q96MT7 982 aa9.21□□□□□ -0.94
HDAC2-216ENST00000523628 BCAMP50895 628 aa9.2□□□□□ -0.94
HDAC2-216ENST00000523628 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
HDAC2-216ENST00000523628 MAP3K7O43318 606 aa9.19□□□□□ -0.94
HDAC2-216ENST00000523628 WDR70Q9NW82 654 aa9.19□□□□□ -0.94
HDAC2-216ENST00000523628 SEPT9Q9UHD8 586 aaPredicted RBP9.19□□□□□ -0.94
HDAC2-216ENST00000523628 ARIH1Q9Y4X5 557 aaPredicted RBP9.19□□□□□ -0.94
HDAC2-216ENST00000523628 TSR1Q2NL82 804 aaKnown RBP9.18□□□□□ -0.94
HDAC2-216ENST00000523628 KDM2AQ9Y2K7 1162 aa9.18□□□□□ -0.94
HDAC2-216ENST00000523628 A0A0G2JS52 829 aa9.17□□□□□ -0.94
HDAC2-216ENST00000523628 RGS20O76081 388 aa9.17□□□□□ -0.94
HDAC2-216ENST00000523628 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
HDAC2-216ENST00000523628 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
HDAC2-216ENST00000523628 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
HDAC2-216ENST00000523628 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
HDAC2-216ENST00000523628 PACS2Q86VP3 889 aa9.15□□□□□ -0.94
HDAC2-216ENST00000523628 TSKSQ9UJT2 592 aa9.15□□□□□ -0.94
HDAC2-216ENST00000523628 WBP1LQ9NX94 342 aa9.14□□□□□ -0.95
HDAC2-216ENST00000523628 GRXCR2A6NFK2 248 aa9.13□□□□□ -0.95
HDAC2-216ENST00000523628 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
HDAC2-216ENST00000523628 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
HDAC2-216ENST00000523628 CERKQ8TCT0 537 aa9.12□□□□□ -0.95
HDAC2-216ENST00000523628 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
HDAC2-216ENST00000523628 PRSS12P56730 875 aa9.11□□□□□ -0.95
HDAC2-216ENST00000523628 CDCA7LQ96GN5 454 aa9.11□□□□□ -0.95
HDAC2-216ENST00000523628 TSR3Q9UJK0 312 aaKnown RBP9.11□□□□□ -0.95
HDAC2-216ENST00000523628 HPS5Q9UPZ3 1129 aa9.1□□□□□ -0.95
HDAC2-216ENST00000523628 OSBPP22059 807 aa9.08□□□□□ -0.96
HDAC2-216ENST00000523628 KCNC4Q03721 635 aa9.08□□□□□ -0.96
HDAC2-216ENST00000523628 FAM198AQ9UFP1 575 aa9.08□□□□□ -0.96
HDAC2-216ENST00000523628 SMAPO00193 183 aa9.06□□□□□ -0.96
HDAC2-216ENST00000523628 VSIG10Q8N0Z9 540 aa9.06□□□□□ -0.96
HDAC2-216ENST00000523628 PPP4CP60510 307 aa9.05□□□□□ -0.96
HDAC2-216ENST00000523628 TATDN2Q93075 761 aa9.05□□□□□ -0.96
HDAC2-216ENST00000523628 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
HDAC2-216ENST00000523628 PNMA3Q9UL41 463 aa9.05□□□□□ -0.96
HDAC2-216ENST00000523628 NBPF26B4DH59 902 aa9.04□□□□□ -0.96
HDAC2-216ENST00000523628 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
HDAC2-216ENST00000523628 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
HDAC2-216ENST00000523628 IRX2Q9BZI1 471 aaPredicted RBP9.04□□□□□ -0.96
HDAC2-216ENST00000523628 RBM27Q9P2N5 1060 aaKnown RBP9.04□□□□□ -0.96
HDAC2-216ENST00000523628 NUDT18Q6ZVK8 323 aa9.01□□□□□ -0.97
HDAC2-216ENST00000523628 TTC13Q8NBP0 860 aa8.99□□□□□ -0.97
HDAC2-216ENST00000523628 NPDC1Q9NQX5 325 aaPredicted RBP8.99□□□□□ -0.97
HDAC2-216ENST00000523628 HDGFP51858 240 aaKnown RBP8.98□□□□□ -0.97
HDAC2-216ENST00000523628 ARHGEF1Q92888 912 aaKnown RBP8.98□□□□□ -0.97
HDAC2-216ENST00000523628 TJAP1Q5JTD0 557 aa8.97□□□□□ -0.97
HDAC2-216ENST00000523628 PADI6Q6TGC4 694 aa8.96□□□□□ -0.98
HDAC2-216ENST00000523628 MLLT3P42568 568 aaPredicted RBP8.94□□□□□ -0.98
HDAC2-216ENST00000523628 KCNV2Q8TDN2 545 aa8.94□□□□□ -0.98
HDAC2-216ENST00000523628 IL21Q9HBE4 155 aa8.94□□□□□ -0.98
HDAC2-216ENST00000523628 RNF40O75150 1001 aa8.93□□□□□ -0.98
HDAC2-216ENST00000523628 NECTIN2Q92692 538 aa8.93□□□□□ -0.98
HDAC2-216ENST00000523628 MTRQ99707 1265 aa8.93□□□□□ -0.98
HDAC2-216ENST00000523628 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
HDAC2-216ENST00000523628 SLF2Q8IX21 1173 aa8.91□□□□□ -0.98
HDAC2-216ENST00000523628 APLP1P51693 650 aa8.9□□□□□ -0.98
HDAC2-216ENST00000523628 EYA1Q99502 592 aa8.9□□□□□ -0.98
HDAC2-216ENST00000523628 PTGDRQ13258 359 aa8.88□□□□□ -0.99
HDAC2-216ENST00000523628 ZNF516Q92618 1163 aa8.88□□□□□ -0.99
HDAC2-216ENST00000523628 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
HDAC2-216ENST00000523628 PPP1R18Q6NYC8 613 aa8.87□□□□□ -0.99
HDAC2-216ENST00000523628 ABCC9O60706 1549 aa8.86□□□□□ -0.99
HDAC2-216ENST00000523628 P3H3Q8IVL6 736 aa8.85□□□□□ -0.99
HDAC2-216ENST00000523628 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
HDAC2-216ENST00000523628 LAPTM4AQ15012 233 aa8.84□□□□□ -0.99
HDAC2-216ENST00000523628 Q6ZNB5 142 aa8.84□□□□□ -0.99
HDAC2-216ENST00000523628 DNAJB2P25686 324 aa8.83□□□□□ -1
HDAC2-216ENST00000523628 COPS2P61201 443 aa8.83□□□□□ -1
HDAC2-216ENST00000523628 RBM46Q8TBY0 533 aaKnown RBP8.83□□□□□ -1
HDAC2-216ENST00000523628 PRR14Q9BWN1 585 aa8.83□□□□□ -1
HDAC2-216ENST00000523628 PRKD2Q9BZL6 878 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms