RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 FAM135AQ9P2D6 1515 aa17.1■□□□□ 0.33
TNIP1-218ENST00000523338 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
TNIP1-218ENST00000523338 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
TNIP1-218ENST00000523338 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.32
TNIP1-218ENST00000523338 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
TNIP1-218ENST00000523338 KDM5CP41229 1560 aa17.07■□□□□ 0.32
TNIP1-218ENST00000523338 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
TNIP1-218ENST00000523338 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
TNIP1-218ENST00000523338 EFCAB2Q5VUJ9 269 aa17.06■□□□□ 0.32
TNIP1-218ENST00000523338 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
TNIP1-218ENST00000523338 ARHGEF5Q12774 1597 aa17.05■□□□□ 0.32
TNIP1-218ENST00000523338 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
TNIP1-218ENST00000523338 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
TNIP1-218ENST00000523338 PLA2R1Q13018 1463 aa17.04■□□□□ 0.32
TNIP1-218ENST00000523338 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.32
TNIP1-218ENST00000523338 ABCC2Q92887 1545 aa17.02■□□□□ 0.32
TNIP1-218ENST00000523338 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.31
TNIP1-218ENST00000523338 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
TNIP1-218ENST00000523338 KDM5DQ9BY66 1539 aa16.99■□□□□ 0.31
TNIP1-218ENST00000523338 PRAG1Q86YV5 1406 aa16.98■□□□□ 0.31
TNIP1-218ENST00000523338 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
TNIP1-218ENST00000523338 SHROOM2Q13796 1616 aa16.97■□□□□ 0.31
TNIP1-218ENST00000523338 PLCH2O75038 1416 aa16.97■□□□□ 0.31
TNIP1-218ENST00000523338 A2MP01023 1474 aa16.97■□□□□ 0.31
TNIP1-218ENST00000523338 PPP4R2Q9NY27 417 aa16.97■□□□□ 0.31
TNIP1-218ENST00000523338 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.31
TNIP1-218ENST00000523338 PANK3Q9H999 370 aa16.96■□□□□ 0.3
TNIP1-218ENST00000523338 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.3
TNIP1-218ENST00000523338 MYO5CQ9NQX4 1742 aa16.95■□□□□ 0.3
TNIP1-218ENST00000523338 KIF3BO15066 747 aa16.95■□□□□ 0.3
TNIP1-218ENST00000523338 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
TNIP1-218ENST00000523338 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
TNIP1-218ENST00000523338 TESK2Q96S53 571 aa16.93■□□□□ 0.3
TNIP1-218ENST00000523338 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
TNIP1-218ENST00000523338 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
TNIP1-218ENST00000523338 PER1O15534 1290 aaPredicted RBP16.9■□□□□ 0.3
TNIP1-218ENST00000523338 RALBP1Q15311 655 aa16.9■□□□□ 0.3
TNIP1-218ENST00000523338 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
TNIP1-218ENST00000523338 KTN1Q86UP2 1357 aaKnown RBP16.89■□□□□ 0.29
TNIP1-218ENST00000523338 TMF1P82094 1093 aa16.88■□□□□ 0.29
TNIP1-218ENST00000523338 SCAPERQ9BY12 1400 aa16.88■□□□□ 0.29
TNIP1-218ENST00000523338 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
TNIP1-218ENST00000523338 TRPM1Q7Z4N2 1603 aa16.87■□□□□ 0.29
TNIP1-218ENST00000523338 UNC13BO14795 1591 aa16.86■□□□□ 0.29
TNIP1-218ENST00000523338 CDCA7LQ96GN5 454 aa16.86■□□□□ 0.29
TNIP1-218ENST00000523338 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
TNIP1-218ENST00000523338 SMG6Q86US8 1419 aaKnown RBP16.85■□□□□ 0.29
TNIP1-218ENST00000523338 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
TNIP1-218ENST00000523338 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
TNIP1-218ENST00000523338 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
TNIP1-218ENST00000523338 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
TNIP1-218ENST00000523338 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
TNIP1-218ENST00000523338 ABCC1P33527 1531 aa16.84■□□□□ 0.29
TNIP1-218ENST00000523338 IQGAP3Q86VI3 1631 aa16.83■□□□□ 0.29
TNIP1-218ENST00000523338 PLXNC1O60486 1568 aa16.83■□□□□ 0.28
TNIP1-218ENST00000523338 MSH5O43196 834 aa16.83■□□□□ 0.28
TNIP1-218ENST00000523338 FANCAO15360 1455 aa16.82■□□□□ 0.28
TNIP1-218ENST00000523338 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
TNIP1-218ENST00000523338 GGT6Q6P531 493 aa16.81■□□□□ 0.28
TNIP1-218ENST00000523338 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
TNIP1-218ENST00000523338 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
TNIP1-218ENST00000523338 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
TNIP1-218ENST00000523338 LRPPRCP42704 1394 aaKnown RBP16.79■□□□□ 0.28
TNIP1-218ENST00000523338 PLIN1O60240 522 aa16.79■□□□□ 0.28
TNIP1-218ENST00000523338 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
TNIP1-218ENST00000523338 KNSTRNQ9Y448 316 aa16.79■□□□□ 0.28
TNIP1-218ENST00000523338 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
TNIP1-218ENST00000523338 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
TNIP1-218ENST00000523338 COL17A1Q9UMD9 1497 aaPredicted RBP16.78■□□□□ 0.28
TNIP1-218ENST00000523338 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
TNIP1-218ENST00000523338 ATP10AO60312 1499 aa16.77■□□□□ 0.27
TNIP1-218ENST00000523338 ADGRL1O94910 1474 aa16.77■□□□□ 0.27
TNIP1-218ENST00000523338 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.27
TNIP1-218ENST00000523338 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
TNIP1-218ENST00000523338 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
TNIP1-218ENST00000523338 KANK1Q14678 1352 aa16.76■□□□□ 0.27
TNIP1-218ENST00000523338 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
TNIP1-218ENST00000523338 E9PCH4 1651 aa16.76■□□□□ 0.27
TNIP1-218ENST00000523338 EXOC6Q8TAG9 804 aa16.76■□□□□ 0.27
TNIP1-218ENST00000523338 RCAN3Q9UKA8 241 aa16.76■□□□□ 0.27
TNIP1-218ENST00000523338 PRDM15P57071 1507 aaPredicted RBP16.75■□□□□ 0.27
TNIP1-218ENST00000523338 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
TNIP1-218ENST00000523338 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
TNIP1-218ENST00000523338 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
TNIP1-218ENST00000523338 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
TNIP1-218ENST00000523338 RAPGEF3O95398 923 aa16.71■□□□□ 0.27
TNIP1-218ENST00000523338 CCDC146Q8IYE0 955 aa16.71■□□□□ 0.27
TNIP1-218ENST00000523338 ATP7AQ04656 1500 aa16.71■□□□□ 0.27
TNIP1-218ENST00000523338 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
TNIP1-218ENST00000523338 TNNT2P45379 298 aaPredicted RBP16.7■□□□□ 0.26
TNIP1-218ENST00000523338 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
TNIP1-218ENST00000523338 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
TNIP1-218ENST00000523338 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
TNIP1-218ENST00000523338 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
TNIP1-218ENST00000523338 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
TNIP1-218ENST00000523338 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
TNIP1-218ENST00000523338 WDR43Q15061 677 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNIP1-218ENST00000523338 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
TNIP1-218ENST00000523338 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
TNIP1-218ENST00000523338 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms