RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	HTATSF1	O43719	755 aa	Known RBP	13	□□□□□ -0.33
TCF7-223	ENST00000522653	PROSER2	Q86WR7	435 aa	Predicted RBP	13	□□□□□ -0.33
TCF7-223	ENST00000522653	COG3	Q96JB2	828 aa		13	□□□□□ -0.33
TCF7-223	ENST00000522653	IFT140	Q96RY7	1462 aa		13	□□□□□ -0.33
TCF7-223	ENST00000522653	KIAA1211	Q6ZU35	1233 aa		12.99	□□□□□ -0.33
TCF7-223	ENST00000522653	USP35	Q9P2H5	1018 aa		12.99	□□□□□ -0.33
TCF7-223	ENST00000522653	HMMR	O75330	724 aa		12.99	□□□□□ -0.33
TCF7-223	ENST00000522653	ANKLE2	Q86XL3	938 aa		12.99	□□□□□ -0.33
TCF7-223	ENST00000522653	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.99	□□□□□ -0.33
TCF7-223	ENST00000522653	EVC2	Q86UK5	1308 aa		12.98	□□□□□ -0.33
TCF7-223	ENST00000522653	TCEAL9	Q9UHQ7	104 aa		12.98	□□□□□ -0.33
TCF7-223	ENST00000522653	KIAA2012	Q0VF49	1180 aa		12.98	□□□□□ -0.33
TCF7-223	ENST00000522653	RBM33	Q96EV2	1170 aa	Known RBP	12.97	□□□□□ -0.33
TCF7-223	ENST00000522653	CHMP3	Q9Y3E7	222 aa		12.96	□□□□□ -0.33
TCF7-223	ENST00000522653	GAPVD1	Q14C86	1478 aa		12.96	□□□□□ -0.34
TCF7-223	ENST00000522653	NEUROD2	Q15784	382 aa		12.96	□□□□□ -0.34
TCF7-223	ENST00000522653	RAPGEF4	Q8WZA2	1011 aa		12.96	□□□□□ -0.34
TCF7-223	ENST00000522653	GRIN2B	Q13224	1484 aa		12.95	□□□□□ -0.34
TCF7-223	ENST00000522653	NEXN	Q0ZGT2	675 aa		12.95	□□□□□ -0.34
TCF7-223	ENST00000522653	TEF	Q10587	303 aa		12.95	□□□□□ -0.34
TCF7-223	ENST00000522653	ROCK2	O75116	1388 aa	Known RBP	12.95	□□□□□ -0.34
TCF7-223	ENST00000522653	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
TCF7-223	ENST00000522653	KTN1	Q86UP2	1357 aa	Known RBP	12.94	□□□□□ -0.34
TCF7-223	ENST00000522653	GOLGA6L4	A6NEF3	574 aa		12.93	□□□□□ -0.34
TCF7-223	ENST00000522653	PLEKHH2	Q8IVE3	1493 aa		12.93	□□□□□ -0.34
TCF7-223	ENST00000522653	PTMA	P06454	111 aa	Known RBP	12.93	□□□□□ -0.34
TCF7-223	ENST00000522653	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.93	□□□□□ -0.34
TCF7-223	ENST00000522653	DDX58	O95786	925 aa	Known RBP	12.93	□□□□□ -0.34
TCF7-223	ENST00000522653	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.92	□□□□□ -0.34
TCF7-223	ENST00000522653	CCAR1	Q8IX12	1150 aa	Known RBP	12.92	□□□□□ -0.34
TCF7-223	ENST00000522653	DHX57	Q6P158	1386 aa	Known RBP	12.92	□□□□□ -0.34
TCF7-223	ENST00000522653	TCERG1	O14776	1098 aa	Known RBP	12.92	□□□□□ -0.34
TCF7-223	ENST00000522653	MARCH6	O60337	910 aa		12.91	□□□□□ -0.34
TCF7-223	ENST00000522653	KIF3A	Q9Y496	699 aa		12.91	□□□□□ -0.34
TCF7-223	ENST00000522653	NCAPD3	P42695	1498 aa		12.91	□□□□□ -0.34
TCF7-223	ENST00000522653	MIA2	Q96PC5	1412 aa		12.9	□□□□□ -0.34
TCF7-223	ENST00000522653	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.9	□□□□□ -0.34
TCF7-223	ENST00000522653	CNKSR2	Q8WXI2	1034 aa		12.9	□□□□□ -0.34
TCF7-223	ENST00000522653	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.89	□□□□□ -0.35
TCF7-223	ENST00000522653	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
TCF7-223	ENST00000522653	SYNJ2	O15056	1496 aa		12.89	□□□□□ -0.35
TCF7-223	ENST00000522653	SYTL4	Q96C24	671 aa	Predicted RBP	12.89	□□□□□ -0.35
TCF7-223	ENST00000522653	MSN	P26038	577 aa	Known RBP	12.89	□□□□□ -0.35
TCF7-223	ENST00000522653	CCDC144A	A2RUR9	1427 aa		12.89	□□□□□ -0.35
TCF7-223	ENST00000522653	SMG6	Q86US8	1419 aa	Known RBP	12.88	□□□□□ -0.35
TCF7-223	ENST00000522653	PDE3B	Q13370	1112 aa		12.88	□□□□□ -0.35
TCF7-223	ENST00000522653	VPS37D	Q86XT2	251 aa		12.88	□□□□□ -0.35
TCF7-223	ENST00000522653	VSIG10	Q8N0Z9	540 aa		12.88	□□□□□ -0.35
TCF7-223	ENST00000522653	RALBP1	Q15311	655 aa		12.87	□□□□□ -0.35
TCF7-223	ENST00000522653	CC2D1B	Q5T0F9	858 aa	Known RBP	12.87	□□□□□ -0.35
TCF7-223	ENST00000522653	LTV1	Q96GA3	475 aa	Predicted RBP	12.87	□□□□□ -0.35
TCF7-223	ENST00000522653	CGNL1	Q0VF96	1302 aa		12.87	□□□□□ -0.35
TCF7-223	ENST00000522653	PRM3	Q9NNZ6	103 aa		12.86	□□□□□ -0.35
TCF7-223	ENST00000522653	TXNDC2	Q86VQ3	553 aa		12.86	□□□□□ -0.35
TCF7-223	ENST00000522653	ROCK1	Q13464	1354 aa		12.85	□□□□□ -0.35
TCF7-223	ENST00000522653	TOM1	O60784	492 aa		12.85	□□□□□ -0.35
TCF7-223	ENST00000522653	RGS3	P49796	1198 aa		12.85	□□□□□ -0.35
TCF7-223	ENST00000522653	FRAT1	Q92837	279 aa	Predicted RBP	12.85	□□□□□ -0.35
TCF7-223	ENST00000522653	VPS53	Q5VIR6	699 aa		12.84	□□□□□ -0.35
TCF7-223	ENST00000522653	WWC2	Q6AWC2	1192 aa		12.84	□□□□□ -0.35
TCF7-223	ENST00000522653	GSE1	Q14687	1217 aa		12.83	□□□□□ -0.36
TCF7-223	ENST00000522653	CEP89	Q96ST8	783 aa		12.83	□□□□□ -0.36
TCF7-223	ENST00000522653	SIN3A	Q96ST3	1273 aa		12.82	□□□□□ -0.36
TCF7-223	ENST00000522653	LRPPRC	P42704	1394 aa	Known RBP	12.82	□□□□□ -0.36
TCF7-223	ENST00000522653	PHLDB1	Q86UU1	1377 aa		12.82	□□□□□ -0.36
TCF7-223	ENST00000522653	PIP4K2B	P78356	416 aa		12.82	□□□□□ -0.36
TCF7-223	ENST00000522653	NCBP3	Q53F19	620 aa	Known RBP	12.82	□□□□□ -0.36
TCF7-223	ENST00000522653	SYNE3	Q6ZMZ3	975 aa		12.82	□□□□□ -0.36
TCF7-223	ENST00000522653	PPP6R1	Q9UPN7	881 aa		12.81	□□□□□ -0.36
TCF7-223	ENST00000522653	AKAP17A	Q02040	695 aa	Known RBP	12.81	□□□□□ -0.36
TCF7-223	ENST00000522653	FBXW7	Q969H0	707 aa		12.81	□□□□□ -0.36
TCF7-223	ENST00000522653	HSP90AB1	P08238	724 aa	Known RBP	12.81	□□□□□ -0.36
TCF7-223	ENST00000522653	PRG4	Q92954	1404 aa	Predicted RBP	12.8	□□□□□ -0.36
TCF7-223	ENST00000522653	TPM4	P67936	248 aa		12.8	□□□□□ -0.36
TCF7-223	ENST00000522653	GOLGA6L3	A6NEY3	463 aa		12.8	□□□□□ -0.36
TCF7-223	ENST00000522653	MPHOSPH9	Q99550	1183 aa		12.8	□□□□□ -0.36
TCF7-223	ENST00000522653	NLRP2	Q9NX02	1062 aa		12.8	□□□□□ -0.36
TCF7-223	ENST00000522653	RAB3GAP2	Q9H2M9	1393 aa		12.79	□□□□□ -0.36
TCF7-223	ENST00000522653	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.79	□□□□□ -0.36
TCF7-223	ENST00000522653	NUTM2E	B1AL46	878 aa	Predicted RBP	12.79	□□□□□ -0.36
TCF7-223	ENST00000522653	PTMS	P20962	102 aa		12.79	□□□□□ -0.36
TCF7-223	ENST00000522653	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.79	□□□□□ -0.36
TCF7-223	ENST00000522653	RASSF8	Q8NHQ8	419 aa		12.79	□□□□□ -0.36
TCF7-223	ENST00000522653	SLC52A1	Q9NWF4	448 aa		12.78	□□□□□ -0.36
TCF7-223	ENST00000522653	CPLX2	Q6PUV4	134 aa	Known RBP	12.78	□□□□□ -0.36
TCF7-223	ENST00000522653	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
TCF7-223	ENST00000522653	KIF6	Q6ZMV9	814 aa		12.78	□□□□□ -0.36
TCF7-223	ENST00000522653	CCDC43	Q96MW1	224 aa	Known RBP	12.78	□□□□□ -0.36
TCF7-223	ENST00000522653	TOMM22	Q9NS69	142 aa		12.78	□□□□□ -0.36
TCF7-223	ENST00000522653	MYOM3	Q5VTT5	1437 aa		12.77	□□□□□ -0.36
TCF7-223	ENST00000522653	NGEF	Q8N5V2	710 aa		12.77	□□□□□ -0.36
TCF7-223	ENST00000522653	PKNOX2	Q96KN3	472 aa		12.77	□□□□□ -0.36
TCF7-223	ENST00000522653	TAT	P17735	454 aa	Predicted RBP	12.77	□□□□□ -0.36
TCF7-223	ENST00000522653	HSCB	Q8IWL3	235 aa		12.77	□□□□□ -0.37
TCF7-223	ENST00000522653	NLRP13	Q86W25	1043 aa		12.76	□□□□□ -0.37
TCF7-223	ENST00000522653	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.76	□□□□□ -0.37
TCF7-223	ENST00000522653	CSPP1	Q1MSJ5	1256 aa		12.76	□□□□□ -0.37
TCF7-223	ENST00000522653	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.76	□□□□□ -0.37
TCF7-223	ENST00000522653	CCDC47	Q96A33	483 aa	Known RBP	12.76	□□□□□ -0.37
TCF7-223	ENST00000522653	TRAK1	Q9UPV9	953 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms