RNA–Protein interactions for RNA: ENST00000522409.1

ZFHX4-208, Transcript of zinc finger homeobox 4, humanhuman

TSL 3

Gene ZFHX4, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4-208ENST00000522409 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
ZFHX4-208ENST00000522409 LCE2DQ5TA82 110 aaPredicted RBP12.91□□□□□ -0.34
ZFHX4-208ENST00000522409 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
ZFHX4-208ENST00000522409 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
ZFHX4-208ENST00000522409 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
ZFHX4-208ENST00000522409 CHD1O14646 1710 aa12.9□□□□□ -0.34
ZFHX4-208ENST00000522409 PLPP6Q8IY26 295 aa12.89□□□□□ -0.35
ZFHX4-208ENST00000522409 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
ZFHX4-208ENST00000522409 IFT140Q96RY7 1462 aa12.88□□□□□ -0.35
ZFHX4-208ENST00000522409 KIF3CO14782 793 aa12.87□□□□□ -0.35
ZFHX4-208ENST00000522409 MINK1Q8N4C8 1332 aaPredicted RBP12.87□□□□□ -0.35
ZFHX4-208ENST00000522409 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
ZFHX4-208ENST00000522409 SLAIN1Q8ND83 568 aa12.85□□□□□ -0.35
ZFHX4-208ENST00000522409 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
ZFHX4-208ENST00000522409 ZMYND15Q9H091 742 aa12.83□□□□□ -0.36
ZFHX4-208ENST00000522409 EIF4G3O43432 1585 aaKnown RBP12.82□□□□□ -0.36
ZFHX4-208ENST00000522409 GRXCR2A6NFK2 248 aa12.82□□□□□ -0.36
ZFHX4-208ENST00000522409 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
ZFHX4-208ENST00000522409 FAM117AQ9C073 453 aa12.82□□□□□ -0.36
ZFHX4-208ENST00000522409 BOLA1Q9Y3E2 137 aa12.82□□□□□ -0.36
ZFHX4-208ENST00000522409 CFTRP13569 1480 aa12.82□□□□□ -0.36
ZFHX4-208ENST00000522409 IRF6O14896 467 aa12.81□□□□□ -0.36
ZFHX4-208ENST00000522409 OSBPP22059 807 aa12.81□□□□□ -0.36
ZFHX4-208ENST00000522409 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
ZFHX4-208ENST00000522409 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
ZFHX4-208ENST00000522409 NUTM2FA1L443 756 aa12.79□□□□□ -0.36
ZFHX4-208ENST00000522409 PTGER2P43116 358 aa12.78□□□□□ -0.36
ZFHX4-208ENST00000522409 AMHR2Q16671 573 aa12.77□□□□□ -0.37
ZFHX4-208ENST00000522409 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
ZFHX4-208ENST00000522409 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
ZFHX4-208ENST00000522409 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
ZFHX4-208ENST00000522409 GNPATO15228 680 aa12.75□□□□□ -0.37
ZFHX4-208ENST00000522409 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
ZFHX4-208ENST00000522409 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
ZFHX4-208ENST00000522409 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
ZFHX4-208ENST00000522409 HIC1Q14526 733 aa12.72□□□□□ -0.37
ZFHX4-208ENST00000522409 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
ZFHX4-208ENST00000522409 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
ZFHX4-208ENST00000522409 FCHSD2O94868 740 aa12.71□□□□□ -0.37
ZFHX4-208ENST00000522409 FECHP22830 423 aa12.71□□□□□ -0.37
ZFHX4-208ENST00000522409 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
ZFHX4-208ENST00000522409 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
ZFHX4-208ENST00000522409 G3V3G9 751 aa12.7□□□□□ -0.38
ZFHX4-208ENST00000522409 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
ZFHX4-208ENST00000522409 CLASP1Q7Z460 1538 aa12.69□□□□□ -0.38
ZFHX4-208ENST00000522409 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
ZFHX4-208ENST00000522409 ST18O60284 1047 aa12.69□□□□□ -0.38
ZFHX4-208ENST00000522409 DDX12PQ92771 950 aa12.69□□□□□ -0.38
ZFHX4-208ENST00000522409 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
ZFHX4-208ENST00000522409 WIZO95785 1651 aa12.69□□□□□ -0.38
ZFHX4-208ENST00000522409 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
ZFHX4-208ENST00000522409 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
ZFHX4-208ENST00000522409 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
ZFHX4-208ENST00000522409 TBC1D12O60347 775 aa12.66□□□□□ -0.38
ZFHX4-208ENST00000522409 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
ZFHX4-208ENST00000522409 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
ZFHX4-208ENST00000522409 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
ZFHX4-208ENST00000522409 PTGDRQ13258 359 aa12.64□□□□□ -0.39
ZFHX4-208ENST00000522409 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
ZFHX4-208ENST00000522409 SNPHO15079 494 aa12.63□□□□□ -0.39
ZFHX4-208ENST00000522409 EVI5O60447 810 aa12.63□□□□□ -0.39
ZFHX4-208ENST00000522409 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
ZFHX4-208ENST00000522409 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
ZFHX4-208ENST00000522409 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
ZFHX4-208ENST00000522409 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
ZFHX4-208ENST00000522409 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
ZFHX4-208ENST00000522409 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
ZFHX4-208ENST00000522409 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
ZFHX4-208ENST00000522409 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.4
ZFHX4-208ENST00000522409 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
ZFHX4-208ENST00000522409 FLIIQ13045 1269 aa12.57□□□□□ -0.4
ZFHX4-208ENST00000522409 FBXO41Q8TF61 875 aa12.57□□□□□ -0.4
ZFHX4-208ENST00000522409 PTCD2Q8WV60 388 aaKnown RBP12.57□□□□□ -0.4
ZFHX4-208ENST00000522409 SNAPC4Q5SXM2 1469 aa12.57□□□□□ -0.4
ZFHX4-208ENST00000522409 MS4A1P11836 297 aa12.56□□□□□ -0.4
ZFHX4-208ENST00000522409 GIGYF2Q6Y7W6 1299 aaKnown RBP12.56□□□□□ -0.4
ZFHX4-208ENST00000522409 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
ZFHX4-208ENST00000522409 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
ZFHX4-208ENST00000522409 REPIN1Q9BWE0 567 aaKnown RBP12.55□□□□□ -0.4
ZFHX4-208ENST00000522409 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
ZFHX4-208ENST00000522409 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
ZFHX4-208ENST00000522409 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
ZFHX4-208ENST00000522409 LMTK3Q96Q04 1460 aa12.52□□□□□ -0.41
ZFHX4-208ENST00000522409 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.41
ZFHX4-208ENST00000522409 SLC34A2O95436 690 aa12.51□□□□□ -0.41
ZFHX4-208ENST00000522409 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
ZFHX4-208ENST00000522409 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
ZFHX4-208ENST00000522409 KDM6BO15054 1643 aa12.49□□□□□ -0.41
ZFHX4-208ENST00000522409 POLA1P09884 1462 aaPredicted RBP12.48□□□□□ -0.41
ZFHX4-208ENST00000522409 PHF14O94880 888 aa12.48□□□□□ -0.41
ZFHX4-208ENST00000522409 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
ZFHX4-208ENST00000522409 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
ZFHX4-208ENST00000522409 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
ZFHX4-208ENST00000522409 EPAS1Q99814 870 aa12.48□□□□□ -0.41
ZFHX4-208ENST00000522409 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
ZFHX4-208ENST00000522409 FAM69CQ0P6D2 419 aa12.47□□□□□ -0.41
ZFHX4-208ENST00000522409 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
ZFHX4-208ENST00000522409 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
ZFHX4-208ENST00000522409 CLCN1P35523 988 aa12.46□□□□□ -0.41
ZFHX4-208ENST00000522409 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms