RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 DPYSL4O14531 572 aa12.7□□□□□ -0.38
CLK4-207ENST00000520909 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
CLK4-207ENST00000520909 EPAS1Q99814 870 aa12.69□□□□□ -0.38
CLK4-207ENST00000520909 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
CLK4-207ENST00000520909 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
CLK4-207ENST00000520909 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
CLK4-207ENST00000520909 COL9A1P20849 921 aa12.67□□□□□ -0.38
CLK4-207ENST00000520909 A0A0G2JS52 829 aa12.66□□□□□ -0.38
CLK4-207ENST00000520909 PROX2Q3B8N5 592 aa12.66□□□□□ -0.38
CLK4-207ENST00000520909 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
CLK4-207ENST00000520909 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
CLK4-207ENST00000520909 DDX12PQ92771 950 aa12.62□□□□□ -0.39
CLK4-207ENST00000520909 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
CLK4-207ENST00000520909 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
CLK4-207ENST00000520909 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
CLK4-207ENST00000520909 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
CLK4-207ENST00000520909 LAPTM4BQ86VI4 370 aa12.6□□□□□ -0.39
CLK4-207ENST00000520909 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
CLK4-207ENST00000520909 PDIA6Q15084 440 aa12.55□□□□□ -0.4
CLK4-207ENST00000520909 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
CLK4-207ENST00000520909 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
CLK4-207ENST00000520909 WDR70Q9NW82 654 aa12.55□□□□□ -0.4
CLK4-207ENST00000520909 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
CLK4-207ENST00000520909 E2F4Q16254 413 aa12.54□□□□□ -0.4
CLK4-207ENST00000520909 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
CLK4-207ENST00000520909 NBR1Q14596 966 aa12.53□□□□□ -0.4
CLK4-207ENST00000520909 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
CLK4-207ENST00000520909 SOWAHBA6NEL2 793 aa12.52□□□□□ -0.41
CLK4-207ENST00000520909 MAP3K7O43318 606 aa12.51□□□□□ -0.41
CLK4-207ENST00000520909 BCAMP50895 628 aa12.51□□□□□ -0.41
CLK4-207ENST00000520909 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
CLK4-207ENST00000520909 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
CLK4-207ENST00000520909 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
CLK4-207ENST00000520909 NYAP1Q6ZVC0 841 aa12.48□□□□□ -0.41
CLK4-207ENST00000520909 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
CLK4-207ENST00000520909 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
CLK4-207ENST00000520909 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
CLK4-207ENST00000520909 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
CLK4-207ENST00000520909 WBP1LQ9NX94 342 aa12.44□□□□□ -0.42
CLK4-207ENST00000520909 GRXCR2A6NFK2 248 aa12.43□□□□□ -0.42
CLK4-207ENST00000520909 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
CLK4-207ENST00000520909 LRCH3Q96II8 777 aa12.42□□□□□ -0.42
CLK4-207ENST00000520909 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
CLK4-207ENST00000520909 CERKQ8TCT0 537 aa12.41□□□□□ -0.42
CLK4-207ENST00000520909 CDCA7LQ96GN5 454 aa12.4□□□□□ -0.42
CLK4-207ENST00000520909 TSR3Q9UJK0 312 aaKnown RBP12.4□□□□□ -0.42
CLK4-207ENST00000520909 Q6ZNB5 142 aa12.39□□□□□ -0.43
CLK4-207ENST00000520909 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
CLK4-207ENST00000520909 PRSS12P56730 875 aa12.38□□□□□ -0.43
CLK4-207ENST00000520909 KCNC4Q03721 635 aa12.37□□□□□ -0.43
CLK4-207ENST00000520909 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
CLK4-207ENST00000520909 OSBPP22059 807 aa12.34□□□□□ -0.43
CLK4-207ENST00000520909 PPP4CP60510 307 aa12.34□□□□□ -0.43
CLK4-207ENST00000520909 SMAPO00193 183 aa12.33□□□□□ -0.44
CLK4-207ENST00000520909 TATDN2Q93075 761 aa12.32□□□□□ -0.44
CLK4-207ENST00000520909 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
CLK4-207ENST00000520909 FAM198AQ9UFP1 575 aa12.31□□□□□ -0.44
CLK4-207ENST00000520909 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
CLK4-207ENST00000520909 SAMD7Q7Z3H4 446 aa12.3□□□□□ -0.44
CLK4-207ENST00000520909 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
CLK4-207ENST00000520909 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.45
CLK4-207ENST00000520909 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.45
CLK4-207ENST00000520909 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
CLK4-207ENST00000520909 NUDT18Q6ZVK8 323 aa12.25□□□□□ -0.45
CLK4-207ENST00000520909 LCE2BO14633 110 aa12.23□□□□□ -0.45
CLK4-207ENST00000520909 LAPTM4AQ15012 233 aa12.22□□□□□ -0.45
CLK4-207ENST00000520909 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
CLK4-207ENST00000520909 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
CLK4-207ENST00000520909 NPDC1Q9NQX5 325 aaPredicted RBP12.21□□□□□ -0.45
CLK4-207ENST00000520909 RNF40O75150 1001 aa12.19□□□□□ -0.46
CLK4-207ENST00000520909 TJAP1Q5JTD0 557 aa12.19□□□□□ -0.46
CLK4-207ENST00000520909 TTC13Q8NBP0 860 aa12.19□□□□□ -0.46
CLK4-207ENST00000520909 PADI6Q6TGC4 694 aa12.18□□□□□ -0.46
CLK4-207ENST00000520909 TRAF7Q6Q0C0 670 aa12.16□□□□□ -0.46
CLK4-207ENST00000520909 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
CLK4-207ENST00000520909 IL21Q9HBE4 155 aa12.16□□□□□ -0.46
CLK4-207ENST00000520909 GFRA3O60609 400 aa12.15□□□□□ -0.46
CLK4-207ENST00000520909 MTRQ99707 1265 aa12.15□□□□□ -0.46
CLK4-207ENST00000520909 MLLT3P42568 568 aaPredicted RBP12.13□□□□□ -0.47
CLK4-207ENST00000520909 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
CLK4-207ENST00000520909 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
CLK4-207ENST00000520909 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
CLK4-207ENST00000520909 KCNV2Q8TDN2 545 aa12.12□□□□□ -0.47
CLK4-207ENST00000520909 APLP1P51693 650 aa12.11□□□□□ -0.47
CLK4-207ENST00000520909 EYA1Q99502 592 aa12.1□□□□□ -0.47
CLK4-207ENST00000520909 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
CLK4-207ENST00000520909 PPP1R18Q6NYC8 613 aa12.07□□□□□ -0.48
CLK4-207ENST00000520909 PTGDRQ13258 359 aa12.06□□□□□ -0.48
CLK4-207ENST00000520909 PRKD2Q9BZL6 878 aa12.06□□□□□ -0.48
CLK4-207ENST00000520909 NRG2O14511 850 aaPredicted RBP12.05□□□□□ -0.48
CLK4-207ENST00000520909 NUTM2FA1L443 756 aa12.04□□□□□ -0.48
CLK4-207ENST00000520909 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
CLK4-207ENST00000520909 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
CLK4-207ENST00000520909 COPS2P61201 443 aa12.03□□□□□ -0.48
CLK4-207ENST00000520909 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
CLK4-207ENST00000520909 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
CLK4-207ENST00000520909 DNAJB2P25686 324 aa12.01□□□□□ -0.49
CLK4-207ENST00000520909 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
CLK4-207ENST00000520909 GGCXP38435 758 aa12□□□□□ -0.49
CLK4-207ENST00000520909 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1675.8 ms