RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 COL9A1P20849 921 aa12.07□□□□□ -0.48
CTHRC1-204ENST00000520880 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
CTHRC1-204ENST00000520880 PPP1R3GB7ZBB8 358 aa12.06□□□□□ -0.48
CTHRC1-204ENST00000520880 BHMG1C9JSJ3 638 aaPredicted RBP12.05□□□□□ -0.48
CTHRC1-204ENST00000520880 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
CTHRC1-204ENST00000520880 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
CTHRC1-204ENST00000520880 C6orf132Q5T0Z8 1188 aa12.03□□□□□ -0.48
CTHRC1-204ENST00000520880 NBR1Q14596 966 aa12.02□□□□□ -0.49
CTHRC1-204ENST00000520880 PROX2Q3B8N5 592 aa12.02□□□□□ -0.49
CTHRC1-204ENST00000520880 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
CTHRC1-204ENST00000520880 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
CTHRC1-204ENST00000520880 HCSTQ9UBK5 93 aa11.98□□□□□ -0.49
CTHRC1-204ENST00000520880 GRXCR2A6NFK2 248 aa11.97□□□□□ -0.49
CTHRC1-204ENST00000520880 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
CTHRC1-204ENST00000520880 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
CTHRC1-204ENST00000520880 TSR1Q2NL82 804 aaKnown RBP11.97□□□□□ -0.49
CTHRC1-204ENST00000520880 MAP3K7O43318 606 aa11.96□□□□□ -0.49
CTHRC1-204ENST00000520880 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
CTHRC1-204ENST00000520880 NBPF3Q9H094 633 aa11.96□□□□□ -0.49
CTHRC1-204ENST00000520880 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.49
CTHRC1-204ENST00000520880 KCNV2Q8TDN2 545 aa11.95□□□□□ -0.5
CTHRC1-204ENST00000520880 KIAA1468Q9P260 1216 aa11.92□□□□□ -0.5
CTHRC1-204ENST00000520880 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
CTHRC1-204ENST00000520880 OSBPP22059 807 aa11.91□□□□□ -0.5
CTHRC1-204ENST00000520880 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
CTHRC1-204ENST00000520880 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
CTHRC1-204ENST00000520880 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
CTHRC1-204ENST00000520880 WNT2BQ93097 391 aa11.9□□□□□ -0.5
CTHRC1-204ENST00000520880 ONECUT3O60422 494 aaPredicted RBP11.89□□□□□ -0.51
CTHRC1-204ENST00000520880 PTPN5P54829 565 aa11.89□□□□□ -0.51
CTHRC1-204ENST00000520880 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
CTHRC1-204ENST00000520880 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
CTHRC1-204ENST00000520880 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
CTHRC1-204ENST00000520880 LAPTM4BQ86VI4 370 aa11.85□□□□□ -0.51
CTHRC1-204ENST00000520880 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
CTHRC1-204ENST00000520880 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
CTHRC1-204ENST00000520880 PRSS12P56730 875 aa11.82□□□□□ -0.52
CTHRC1-204ENST00000520880 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
CTHRC1-204ENST00000520880 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
CTHRC1-204ENST00000520880 ZFRQ96KR1 1074 aaKnown RBP11.82□□□□□ -0.52
CTHRC1-204ENST00000520880 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
CTHRC1-204ENST00000520880 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
CTHRC1-204ENST00000520880 CERKQ8TCT0 537 aa11.81□□□□□ -0.52
CTHRC1-204ENST00000520880 BCAMP50895 628 aa11.8□□□□□ -0.52
CTHRC1-204ENST00000520880 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
CTHRC1-204ENST00000520880 PACS2Q86VP3 889 aa11.8□□□□□ -0.52
CTHRC1-204ENST00000520880 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
CTHRC1-204ENST00000520880 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
CTHRC1-204ENST00000520880 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
CTHRC1-204ENST00000520880 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
CTHRC1-204ENST00000520880 SMAPO00193 183 aa11.75□□□□□ -0.53
CTHRC1-204ENST00000520880 SEMA3EO15041 775 aa11.74□□□□□ -0.53
CTHRC1-204ENST00000520880 RBM27Q9P2N5 1060 aaKnown RBP11.73□□□□□ -0.53
CTHRC1-204ENST00000520880 TATDN2Q93075 761 aa11.72□□□□□ -0.53
CTHRC1-204ENST00000520880 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
CTHRC1-204ENST00000520880 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
CTHRC1-204ENST00000520880 WBP1LQ9NX94 342 aa11.71□□□□□ -0.53
CTHRC1-204ENST00000520880 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
CTHRC1-204ENST00000520880 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
CTHRC1-204ENST00000520880 KDM2AQ9Y2K7 1162 aa11.71□□□□□ -0.53
CTHRC1-204ENST00000520880 TTC13Q8NBP0 860 aa11.7□□□□□ -0.54
CTHRC1-204ENST00000520880 LRCH3Q96II8 777 aa11.7□□□□□ -0.54
CTHRC1-204ENST00000520880 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
CTHRC1-204ENST00000520880 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
CTHRC1-204ENST00000520880 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
CTHRC1-204ENST00000520880 PTGDRQ13258 359 aa11.66□□□□□ -0.54
CTHRC1-204ENST00000520880 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
CTHRC1-204ENST00000520880 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
CTHRC1-204ENST00000520880 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
CTHRC1-204ENST00000520880 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
CTHRC1-204ENST00000520880 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
CTHRC1-204ENST00000520880 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
CTHRC1-204ENST00000520880 PPP4CP60510 307 aa11.59□□□□□ -0.55
CTHRC1-204ENST00000520880 EYA1Q99502 592 aa11.59□□□□□ -0.55
CTHRC1-204ENST00000520880 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
CTHRC1-204ENST00000520880 SWT1Q5T5J6 900 aaKnown RBP11.56□□□□□ -0.56
CTHRC1-204ENST00000520880 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
CTHRC1-204ENST00000520880 RNF40O75150 1001 aa11.55□□□□□ -0.56
CTHRC1-204ENST00000520880 FCHSD2O94868 740 aa11.55□□□□□ -0.56
CTHRC1-204ENST00000520880 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
CTHRC1-204ENST00000520880 FAM161AQ3B820 660 aa11.55□□□□□ -0.56
CTHRC1-204ENST00000520880 A0A0G2JS52 829 aa11.54□□□□□ -0.56
CTHRC1-204ENST00000520880 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
CTHRC1-204ENST00000520880 SMYD5Q6GMV2 418 aa11.53□□□□□ -0.56
CTHRC1-204ENST00000520880 KCNC4Q03721 635 aa11.51□□□□□ -0.57
CTHRC1-204ENST00000520880 RBM46Q8TBY0 533 aaKnown RBP11.5□□□□□ -0.57
CTHRC1-204ENST00000520880 GPR37O15354 613 aa11.49□□□□□ -0.57
CTHRC1-204ENST00000520880 APLP1P51693 650 aa11.49□□□□□ -0.57
CTHRC1-204ENST00000520880 DNAJB2P25686 324 aa11.48□□□□□ -0.57
CTHRC1-204ENST00000520880 HIC1Q14526 733 aa11.48□□□□□ -0.57
CTHRC1-204ENST00000520880 TJAP1Q5JTD0 557 aa11.48□□□□□ -0.57
CTHRC1-204ENST00000520880 SLF2Q8IX21 1173 aa11.48□□□□□ -0.57
CTHRC1-204ENST00000520880 FECHP22830 423 aa11.47□□□□□ -0.57
CTHRC1-204ENST00000520880 TMEM134Q9H6X4 195 aa11.47□□□□□ -0.57
CTHRC1-204ENST00000520880 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
CTHRC1-204ENST00000520880 MTRQ99707 1265 aa11.45□□□□□ -0.58
CTHRC1-204ENST00000520880 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
CTHRC1-204ENST00000520880 GNPATO15228 680 aa11.43□□□□□ -0.58
CTHRC1-204ENST00000520880 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
CTHRC1-204ENST00000520880 PXYLP1Q8TE99 480 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms