RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	PDIA6	Q15084	440 aa		7.86	□□□□□ -1.15
EFCAB13-208	ENST00000520776	TYW1B	Q6NUM6	668 aa		7.86	□□□□□ -1.15
EFCAB13-208	ENST00000520776	PSEN2	P49810	448 aa		7.86	□□□□□ -1.15
EFCAB13-208	ENST00000520776	DMRTA1	Q5VZB9	504 aa		7.86	□□□□□ -1.15
EFCAB13-208	ENST00000520776	HR	O43593	1189 aa		7.85	□□□□□ -1.15
EFCAB13-208	ENST00000520776	PCDHGA10	Q9Y5H3	936 aa		7.84	□□□□□ -1.15
EFCAB13-208	ENST00000520776	P3H3	Q8IVL6	736 aa		7.84	□□□□□ -1.15
EFCAB13-208	ENST00000520776	PPP1R3G	B7ZBB8	358 aa		7.83	□□□□□ -1.16
EFCAB13-208	ENST00000520776	KCNV2	Q8TDN2	545 aa		7.83	□□□□□ -1.16
EFCAB13-208	ENST00000520776	ADAM33	Q9BZ11	813 aa		7.83	□□□□□ -1.16
EFCAB13-208	ENST00000520776	VPS9D1	Q9Y2B5	631 aa		7.83	□□□□□ -1.16
EFCAB13-208	ENST00000520776	STAC3	Q96MF2	364 aa		7.82	□□□□□ -1.16
EFCAB13-208	ENST00000520776	ZBED2	Q9BTP6	218 aa		7.8	□□□□□ -1.16
EFCAB13-208	ENST00000520776	NBPF3	Q9H094	633 aa		7.79	□□□□□ -1.16
EFCAB13-208	ENST00000520776	ONECUT3	O60422	494 aa	Predicted RBP	7.78	□□□□□ -1.16
EFCAB13-208	ENST00000520776	HCST	Q9UBK5	93 aa		7.78	□□□□□ -1.16
EFCAB13-208	ENST00000520776	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.76	□□□□□ -1.17
EFCAB13-208	ENST00000520776	EN1	Q05925	392 aa	Predicted RBP	7.76	□□□□□ -1.17
EFCAB13-208	ENST00000520776	C6orf132	Q5T0Z8	1188 aa		7.75	□□□□□ -1.17
EFCAB13-208	ENST00000520776	ARHGEF1	Q92888	912 aa	Known RBP	7.75	□□□□□ -1.17
EFCAB13-208	ENST00000520776	RABGEF1	Q9UJ41	708 aa		7.75	□□□□□ -1.17
EFCAB13-208	ENST00000520776	DDX12P	Q92771	950 aa		7.75	□□□□□ -1.17
EFCAB13-208	ENST00000520776	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
EFCAB13-208	ENST00000520776	MRPL50	Q8N5N7	158 aa	Known RBP	7.74	□□□□□ -1.17
EFCAB13-208	ENST00000520776	LAPTM4B	Q86VI4	370 aa		7.73	□□□□□ -1.17
EFCAB13-208	ENST00000520776	CERK	Q8TCT0	537 aa		7.73	□□□□□ -1.17
EFCAB13-208	ENST00000520776	COL9A1	P20849	921 aa		7.72	□□□□□ -1.17
EFCAB13-208	ENST00000520776	GOLGA8CP	A6NN73	597 aa		7.71	□□□□□ -1.17
EFCAB13-208	ENST00000520776	MAP3K7	O43318	606 aa		7.71	□□□□□ -1.18
EFCAB13-208	ENST00000520776	KCTD12	Q96CX2	325 aa	Known RBP	7.7	□□□□□ -1.18
EFCAB13-208	ENST00000520776	TRIM6-TRIM34	B2RNG4	842 aa		7.7	□□□□□ -1.18
EFCAB13-208	ENST00000520776	LMOD2	Q6P5Q4	547 aa		7.7	□□□□□ -1.18
EFCAB13-208	ENST00000520776	RBM33	Q96EV2	1170 aa	Known RBP	7.7	□□□□□ -1.18
EFCAB13-208	ENST00000520776	PROX2	Q3B8N5	592 aa		7.68	□□□□□ -1.18
EFCAB13-208	ENST00000520776	GRXCR2	A6NFK2	248 aa		7.68	□□□□□ -1.18
EFCAB13-208	ENST00000520776	THSD4	Q6ZMP0	1018 aa		7.68	□□□□□ -1.18
EFCAB13-208	ENST00000520776	WNT2B	Q93097	391 aa		7.68	□□□□□ -1.18
EFCAB13-208	ENST00000520776	RBM27	Q9P2N5	1060 aa	Known RBP	7.68	□□□□□ -1.18
EFCAB13-208	ENST00000520776	SEMA3E	O15041	775 aa		7.67	□□□□□ -1.18
EFCAB13-208	ENST00000520776	TESPA1	A2RU30	521 aa	Predicted RBP	7.66	□□□□□ -1.18
EFCAB13-208	ENST00000520776	OSBP	P22059	807 aa		7.66	□□□□□ -1.18
EFCAB13-208	ENST00000520776	PACS2	Q86VP3	889 aa		7.66	□□□□□ -1.18
EFCAB13-208	ENST00000520776	ANKK1	Q8NFD2	765 aa		7.66	□□□□□ -1.18
EFCAB13-208	ENST00000520776	TSR1	Q2NL82	804 aa	Known RBP	7.66	□□□□□ -1.18
EFCAB13-208	ENST00000520776	KIAA1468	Q9P260	1216 aa		7.66	□□□□□ -1.18
EFCAB13-208	ENST00000520776	FAM98C	Q17RN3	349 aa	Known RBP	7.64	□□□□□ -1.19
EFCAB13-208	ENST00000520776	NYAP1	Q6ZVC0	841 aa		7.64	□□□□□ -1.19
EFCAB13-208	ENST00000520776	PRSS12	P56730	875 aa		7.64	□□□□□ -1.19
EFCAB13-208	ENST00000520776	CDCA7L	Q96GN5	454 aa		7.62	□□□□□ -1.19
EFCAB13-208	ENST00000520776	PLA2G2E	Q9NZK7	142 aa		7.62	□□□□□ -1.19
EFCAB13-208	ENST00000520776	NBPF26	B4DH59	902 aa		7.62	□□□□□ -1.19
EFCAB13-208	ENST00000520776	ZFR	Q96KR1	1074 aa	Known RBP	7.62	□□□□□ -1.19
EFCAB13-208	ENST00000520776	SOWAHB	A6NEL2	793 aa		7.61	□□□□□ -1.19
EFCAB13-208	ENST00000520776	TULP1	O00294	542 aa	Predicted RBP	7.61	□□□□□ -1.19
EFCAB13-208	ENST00000520776	PRIM1	P49642	420 aa	Known RBP	7.61	□□□□□ -1.19
EFCAB13-208	ENST00000520776	IFFO2	Q5TF58	517 aa		7.61	□□□□□ -1.19
EFCAB13-208	ENST00000520776	TSKS	Q9UJT2	592 aa		7.61	□□□□□ -1.19
EFCAB13-208	ENST00000520776	ZC3H15	Q8WU90	426 aa	Known RBP	7.6	□□□□□ -1.19
EFCAB13-208	ENST00000520776	PTPN5	P54829	565 aa		7.6	□□□□□ -1.19
EFCAB13-208	ENST00000520776	TTC13	Q8NBP0	860 aa		7.58	□□□□□ -1.2
EFCAB13-208	ENST00000520776	LRCH3	Q96II8	777 aa		7.58	□□□□□ -1.2
EFCAB13-208	ENST00000520776	CDHR5	Q9HBB8	845 aa		7.58	□□□□□ -1.2
EFCAB13-208	ENST00000520776	SEPT9	Q9UHD8	586 aa	Predicted RBP	7.58	□□□□□ -1.2
EFCAB13-208	ENST00000520776	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	7.57	□□□□□ -1.2
EFCAB13-208	ENST00000520776	MLLT3	P42568	568 aa	Predicted RBP	7.57	□□□□□ -1.2
EFCAB13-208	ENST00000520776	SMYD5	Q6GMV2	418 aa		7.56	□□□□□ -1.2
EFCAB13-208	ENST00000520776	NECTIN2	Q92692	538 aa		7.56	□□□□□ -1.2
EFCAB13-208	ENST00000520776	TATDN2	Q93075	761 aa		7.56	□□□□□ -1.2
EFCAB13-208	ENST00000520776	NPDC1	Q9NQX5	325 aa	Predicted RBP	7.55	□□□□□ -1.2
EFCAB13-208	ENST00000520776	TSR3	Q9UJK0	312 aa	Known RBP	7.55	□□□□□ -1.2
EFCAB13-208	ENST00000520776	BCAM	P50895	628 aa		7.55	□□□□□ -1.2
EFCAB13-208	ENST00000520776	PNMA3	Q9UL41	463 aa		7.55	□□□□□ -1.2
EFCAB13-208	ENST00000520776	FAM198A	Q9UFP1	575 aa		7.54	□□□□□ -1.2
EFCAB13-208	ENST00000520776	HDGF	P51858	240 aa	Known RBP	7.53	□□□□□ -1.2
EFCAB13-208	ENST00000520776	ZMYND10	O75800	440 aa		7.53	□□□□□ -1.2
EFCAB13-208	ENST00000520776	ITGBL1	O95965	494 aa	Predicted RBP	7.53	□□□□□ -1.2
EFCAB13-208	ENST00000520776	PTGDR	Q13258	359 aa		7.53	□□□□□ -1.2
EFCAB13-208	ENST00000520776	TMEM132A	Q24JP5	1023 aa		7.53	□□□□□ -1.2
EFCAB13-208	ENST00000520776	PADI6	Q6TGC4	694 aa		7.53	□□□□□ -1.2
EFCAB13-208	ENST00000520776	SLC24A3	Q9HC58	644 aa		7.52	□□□□□ -1.21
EFCAB13-208	ENST00000520776	RGS20	O76081	388 aa		7.51	□□□□□ -1.21
EFCAB13-208	ENST00000520776	NUDT18	Q6ZVK8	323 aa		7.51	□□□□□ -1.21
EFCAB13-208	ENST00000520776	HPS5	Q9UPZ3	1129 aa		7.51	□□□□□ -1.21
EFCAB13-208	ENST00000520776	FCHSD2	O94868	740 aa		7.51	□□□□□ -1.21
EFCAB13-208	ENST00000520776	SLC4A3	P48751	1232 aa		7.51	□□□□□ -1.21
EFCAB13-208	ENST00000520776	BRPF1	P55201	1214 aa	Predicted RBP	7.51	□□□□□ -1.21
EFCAB13-208	ENST00000520776	WBP1L	Q9NX94	342 aa		7.5	□□□□□ -1.21
EFCAB13-208	ENST00000520776	RBM26	Q5T8P6	1007 aa	Known RBP	7.5	□□□□□ -1.21
EFCAB13-208	ENST00000520776	SAMD7	Q7Z3H4	446 aa		7.5	□□□□□ -1.21
EFCAB13-208	ENST00000520776	GTF3C3	Q9Y5Q9	886 aa		7.5	□□□□□ -1.21
EFCAB13-208	ENST00000520776	NUTM2F	A1L443	756 aa		7.49	□□□□□ -1.21
EFCAB13-208	ENST00000520776	PPP4C	P60510	307 aa		7.49	□□□□□ -1.21
EFCAB13-208	ENST00000520776	SMAP	O00193	183 aa		7.48	□□□□□ -1.21
EFCAB13-208	ENST00000520776	BARGIN	Q6ZT62	677 aa		7.48	□□□□□ -1.21
EFCAB13-208	ENST00000520776	SLF2	Q8IX21	1173 aa		7.48	□□□□□ -1.21
EFCAB13-208	ENST00000520776	RBM46	Q8TBY0	533 aa	Known RBP	7.48	□□□□□ -1.21
EFCAB13-208	ENST00000520776	HIC1	Q14526	733 aa		7.47	□□□□□ -1.21
EFCAB13-208	ENST00000520776	EYA1	Q99502	592 aa		7.47	□□□□□ -1.21
EFCAB13-208	ENST00000520776		A0A0G2JS52	829 aa		7.46	□□□□□ -1.21
EFCAB13-208	ENST00000520776	C3orf80	F5H4A9	247 aa		7.46	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms