RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
LINC00535-204ENST00000520513 KCNV2Q8TDN2 545 aa12.81□□□□□ -0.36
LINC00535-204ENST00000520513 SLC4A5Q9BY07 1137 aa12.81□□□□□ -0.36
LINC00535-204ENST00000520513 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
LINC00535-204ENST00000520513 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
LINC00535-204ENST00000520513 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
LINC00535-204ENST00000520513 BHMG1C9JSJ3 638 aaPredicted RBP12.79□□□□□ -0.36
LINC00535-204ENST00000520513 EPAS1Q99814 870 aa12.79□□□□□ -0.36
LINC00535-204ENST00000520513 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
LINC00535-204ENST00000520513 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
LINC00535-204ENST00000520513 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
LINC00535-204ENST00000520513 NBR1Q14596 966 aa12.77□□□□□ -0.37
LINC00535-204ENST00000520513 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
LINC00535-204ENST00000520513 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
LINC00535-204ENST00000520513 GRXCR2A6NFK2 248 aa12.73□□□□□ -0.37
LINC00535-204ENST00000520513 OSBPP22059 807 aa12.72□□□□□ -0.37
LINC00535-204ENST00000520513 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
LINC00535-204ENST00000520513 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
LINC00535-204ENST00000520513 KCTD12Q96CX2 325 aaKnown RBP12.69□□□□□ -0.38
LINC00535-204ENST00000520513 MAP3K7O43318 606 aa12.68□□□□□ -0.38
LINC00535-204ENST00000520513 MLLT3P42568 568 aaPredicted RBP12.68□□□□□ -0.38
LINC00535-204ENST00000520513 CDHR5Q9HBB8 845 aa12.67□□□□□ -0.38
LINC00535-204ENST00000520513 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
LINC00535-204ENST00000520513 KDM2AQ9Y2K7 1162 aa12.66□□□□□ -0.38
LINC00535-204ENST00000520513 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
LINC00535-204ENST00000520513 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
LINC00535-204ENST00000520513 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
LINC00535-204ENST00000520513 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
LINC00535-204ENST00000520513 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
LINC00535-204ENST00000520513 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
LINC00535-204ENST00000520513 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
LINC00535-204ENST00000520513 C3orf80F5H4A9 247 aa12.62□□□□□ -0.39
LINC00535-204ENST00000520513 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
LINC00535-204ENST00000520513 SEPT9Q9UHD8 586 aaPredicted RBP12.59□□□□□ -0.39
LINC00535-204ENST00000520513 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
LINC00535-204ENST00000520513 NPDC1Q9NQX5 325 aaPredicted RBP12.58□□□□□ -0.4
LINC00535-204ENST00000520513 SEMA3EO15041 775 aa12.57□□□□□ -0.4
LINC00535-204ENST00000520513 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
LINC00535-204ENST00000520513 GOLGA8CPA6NN73 597 aa12.56□□□□□ -0.4
LINC00535-204ENST00000520513 WNT2BQ93097 391 aa12.56□□□□□ -0.4
LINC00535-204ENST00000520513 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
LINC00535-204ENST00000520513 PTPN5P54829 565 aa12.55□□□□□ -0.4
LINC00535-204ENST00000520513 PRSS12P56730 875 aa12.54□□□□□ -0.4
LINC00535-204ENST00000520513 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
LINC00535-204ENST00000520513 SMAPO00193 183 aa12.52□□□□□ -0.41
LINC00535-204ENST00000520513 LAPTM4BQ86VI4 370 aa12.52□□□□□ -0.41
LINC00535-204ENST00000520513 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
LINC00535-204ENST00000520513 BCAMP50895 628 aa12.51□□□□□ -0.41
LINC00535-204ENST00000520513 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
LINC00535-204ENST00000520513 TTC13Q8NBP0 860 aa12.48□□□□□ -0.41
LINC00535-204ENST00000520513 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
LINC00535-204ENST00000520513 PLA2G2EQ9NZK7 142 aa12.47□□□□□ -0.41
LINC00535-204ENST00000520513 PADI6Q6TGC4 694 aa12.46□□□□□ -0.41
LINC00535-204ENST00000520513 PACS2Q86VP3 889 aa12.46□□□□□ -0.41
LINC00535-204ENST00000520513 ANKK1Q8NFD2 765 aa12.46□□□□□ -0.41
LINC00535-204ENST00000520513 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
LINC00535-204ENST00000520513 SOWAHBA6NEL2 793 aa12.45□□□□□ -0.42
LINC00535-204ENST00000520513 TATDN2Q93075 761 aa12.45□□□□□ -0.42
LINC00535-204ENST00000520513 PTGDRQ13258 359 aa12.43□□□□□ -0.42
LINC00535-204ENST00000520513 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
LINC00535-204ENST00000520513 NUDT18Q6ZVK8 323 aa12.42□□□□□ -0.42
LINC00535-204ENST00000520513 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
LINC00535-204ENST00000520513 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
LINC00535-204ENST00000520513 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
LINC00535-204ENST00000520513 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
LINC00535-204ENST00000520513 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
LINC00535-204ENST00000520513 NBPF26B4DH59 902 aa12.38□□□□□ -0.43
LINC00535-204ENST00000520513 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
LINC00535-204ENST00000520513 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.37□□□□□ -0.43
LINC00535-204ENST00000520513 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
LINC00535-204ENST00000520513 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
LINC00535-204ENST00000520513 EYA1Q99502 592 aa12.35□□□□□ -0.43
LINC00535-204ENST00000520513 HPS5Q9UPZ3 1129 aa12.35□□□□□ -0.43
LINC00535-204ENST00000520513 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
LINC00535-204ENST00000520513 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
LINC00535-204ENST00000520513 GPR37O15354 613 aa12.33□□□□□ -0.44
LINC00535-204ENST00000520513 TSR3Q9UJK0 312 aaKnown RBP12.32□□□□□ -0.44
LINC00535-204ENST00000520513 FECHP22830 423 aa12.3□□□□□ -0.44
LINC00535-204ENST00000520513 ADGRG1Q9Y653 693 aa12.3□□□□□ -0.44
LINC00535-204ENST00000520513 FCHSD2O94868 740 aa12.28□□□□□ -0.44
LINC00535-204ENST00000520513 SWT1Q5T5J6 900 aaKnown RBP12.28□□□□□ -0.44
LINC00535-204ENST00000520513 ITGBL1O95965 494 aaPredicted RBP12.25□□□□□ -0.45
LINC00535-204ENST00000520513 PPP4CP60510 307 aa12.24□□□□□ -0.45
LINC00535-204ENST00000520513 SMYD5Q6GMV2 418 aa12.22□□□□□ -0.45
LINC00535-204ENST00000520513 RNF40O75150 1001 aa12.21□□□□□ -0.45
LINC00535-204ENST00000520513 APLP1P51693 650 aa12.21□□□□□ -0.45
LINC00535-204ENST00000520513 HIC1Q14526 733 aa12.21□□□□□ -0.45
LINC00535-204ENST00000520513 RCCD1A6NED2 376 aa12.19□□□□□ -0.46
LINC00535-204ENST00000520513 A0A0G2JS52 829 aa12.18□□□□□ -0.46
LINC00535-204ENST00000520513 GNPATO15228 680 aa12.18□□□□□ -0.46
LINC00535-204ENST00000520513 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
LINC00535-204ENST00000520513 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
LINC00535-204ENST00000520513 PXYLP1Q8TE99 480 aa12.18□□□□□ -0.46
LINC00535-204ENST00000520513 TMEM134Q9H6X4 195 aa12.18□□□□□ -0.46
LINC00535-204ENST00000520513 DNAJB2P25686 324 aa12.17□□□□□ -0.46
LINC00535-204ENST00000520513 TJAP1Q5JTD0 557 aa12.17□□□□□ -0.46
LINC00535-204ENST00000520513 METTL3Q86U44 580 aaKnown RBP12.15□□□□□ -0.46
LINC00535-204ENST00000520513 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
LINC00535-204ENST00000520513 RGS20O76081 388 aa12.14□□□□□ -0.47
LINC00535-204ENST00000520513 GPIHBP1Q8IV16 184 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms