RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 KIF3CO14782 793 aa9.22□□□□□ -0.93
CTNNA1-218ENST00000519768 FAM69CQ0P6D2 419 aa9.22□□□□□ -0.93
CTNNA1-218ENST00000519768 MFSD10Q14728 455 aa9.22□□□□□ -0.93
CTNNA1-218ENST00000519768 TMC2Q8TDI7 906 aa9.22□□□□□ -0.93
CTNNA1-218ENST00000519768 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-218ENST00000519768 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
CTNNA1-218ENST00000519768 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-218ENST00000519768 SYNJ2O15056 1496 aa9.2□□□□□ -0.94
CTNNA1-218ENST00000519768 C2orf72A6NCS6 295 aa9.19□□□□□ -0.94
CTNNA1-218ENST00000519768 FOXK1P85037 733 aa9.19□□□□□ -0.94
CTNNA1-218ENST00000519768 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
CTNNA1-218ENST00000519768 GRIN2BQ13224 1484 aa9.17□□□□□ -0.94
CTNNA1-218ENST00000519768 FGD5Q6ZNL6 1462 aa9.17□□□□□ -0.94
CTNNA1-218ENST00000519768 MAGI1Q96QZ7 1491 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-218ENST00000519768 DSG2Q14126 1118 aa9.16□□□□□ -0.94
CTNNA1-218ENST00000519768 PPP1R15BQ5SWA1 713 aa9.16□□□□□ -0.94
CTNNA1-218ENST00000519768 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
CTNNA1-218ENST00000519768 E2F4Q16254 413 aa9.14□□□□□ -0.95
CTNNA1-218ENST00000519768 P3H3Q8IVL6 736 aa9.14□□□□□ -0.95
CTNNA1-218ENST00000519768 HECW2Q9P2P5 1572 aa9.14□□□□□ -0.95
CTNNA1-218ENST00000519768 CAMK2BQ13554 666 aa9.13□□□□□ -0.95
CTNNA1-218ENST00000519768 PLPP6Q8IY26 295 aa9.13□□□□□ -0.95
CTNNA1-218ENST00000519768 ABCC10Q5T3U5 1492 aa9.13□□□□□ -0.95
CTNNA1-218ENST00000519768 TSPOAP1O95153 1857 aa9.13□□□□□ -0.95
CTNNA1-218ENST00000519768 ILDR2Q71H61 639 aa9.12□□□□□ -0.95
CTNNA1-218ENST00000519768 CUX1P39880 1505 aa9.11□□□□□ -0.95
CTNNA1-218ENST00000519768 FBXO41Q8TF61 875 aa9.11□□□□□ -0.95
CTNNA1-218ENST00000519768 ADGRL1O94910 1474 aa9.1□□□□□ -0.95
CTNNA1-218ENST00000519768 KDM6BO15054 1643 aa9.1□□□□□ -0.95
CTNNA1-218ENST00000519768 PBRM1Q86U86 1689 aa9.1□□□□□ -0.95
CTNNA1-218ENST00000519768 KCNV2Q8TDN2 545 aa9.09□□□□□ -0.95
CTNNA1-218ENST00000519768 DIP2BQ9P265 1576 aa9.08□□□□□ -0.96
CTNNA1-218ENST00000519768 ARIH1Q9Y4X5 557 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-218ENST00000519768 COL17A1Q9UMD9 1497 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-218ENST00000519768 NUP160Q12769 1436 aa9.07□□□□□ -0.96
CTNNA1-218ENST00000519768 WDR97A6NE52 1622 aa9.07□□□□□ -0.96
CTNNA1-218ENST00000519768 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-218ENST00000519768 GRIN2AQ12879 1464 aa9.07□□□□□ -0.96
CTNNA1-218ENST00000519768 PRG4Q92954 1404 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-218ENST00000519768 SHROOM2Q13796 1616 aa9.06□□□□□ -0.96
CTNNA1-218ENST00000519768 SLC34A2O95436 690 aa9.06□□□□□ -0.96
CTNNA1-218ENST00000519768 ERBB3P21860 1342 aa9.05□□□□□ -0.96
CTNNA1-218ENST00000519768 HOXB1P14653 301 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-218ENST00000519768 JPH4Q96JJ6 628 aa9.04□□□□□ -0.96
CTNNA1-218ENST00000519768 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
CTNNA1-218ENST00000519768 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-218ENST00000519768 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.96
CTNNA1-218ENST00000519768 OXER1Q8TDS5 423 aa9.02□□□□□ -0.97
CTNNA1-218ENST00000519768 PTCD2Q8WV60 388 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-218ENST00000519768 LMTK3Q96Q04 1460 aa9.02□□□□□ -0.97
CTNNA1-218ENST00000519768 ADCY10Q96PN6 1610 aa9.02□□□□□ -0.97
CTNNA1-218ENST00000519768 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
CTNNA1-218ENST00000519768 BCANQ96GW7 911 aa9.01□□□□□ -0.97
CTNNA1-218ENST00000519768 MAPKBP1O60336 1514 aa9□□□□□ -0.97
CTNNA1-218ENST00000519768 PPRC1Q5VV67 1664 aaKnown RBP9□□□□□ -0.97
CTNNA1-218ENST00000519768 ABCA10Q8WWZ4 1543 aa9□□□□□ -0.97
CTNNA1-218ENST00000519768 TBC1D12O60347 775 aa8.99□□□□□ -0.97
CTNNA1-218ENST00000519768 PTGER2P43116 358 aa8.99□□□□□ -0.97
CTNNA1-218ENST00000519768 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
CTNNA1-218ENST00000519768 SOCS7O14512 581 aa8.98□□□□□ -0.97
CTNNA1-218ENST00000519768 DPYSL4O14531 572 aa8.98□□□□□ -0.97
CTNNA1-218ENST00000519768 RIMBP2O15034 1052 aa8.98□□□□□ -0.97
CTNNA1-218ENST00000519768 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
CTNNA1-218ENST00000519768 NBR1Q14596 966 aa8.98□□□□□ -0.97
CTNNA1-218ENST00000519768 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
CTNNA1-218ENST00000519768 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-218ENST00000519768 UPF1Q92900 1129 aaKnown RBP eCLIP8.97□□□□□ -0.97
CTNNA1-218ENST00000519768 PDIA6Q15084 440 aa8.96□□□□□ -0.98
CTNNA1-218ENST00000519768 VARS2Q5ST30 1063 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-218ENST00000519768 ZNF710Q8N1W2 664 aa8.96□□□□□ -0.98
CTNNA1-218ENST00000519768 TTBK1Q5TCY1 1321 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-218ENST00000519768 PCDHGA4Q9Y5G9 962 aa8.95□□□□□ -0.98
CTNNA1-218ENST00000519768 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
CTNNA1-218ENST00000519768 FHAD1B1AJZ9 1412 aa8.94□□□□□ -0.98
CTNNA1-218ENST00000519768 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
CTNNA1-218ENST00000519768 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
CTNNA1-218ENST00000519768 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-218ENST00000519768 EVI5O60447 810 aa8.91□□□□□ -0.98
CTNNA1-218ENST00000519768 ANO8Q9HCE9 1232 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-218ENST00000519768 DISP3Q9P2K9 1392 aa8.9□□□□□ -0.98
CTNNA1-218ENST00000519768 SEMA3EO15041 775 aa8.9□□□□□ -0.98
CTNNA1-218ENST00000519768 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
CTNNA1-218ENST00000519768 TESPA1A2RU30 521 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-218ENST00000519768 ASXL2Q76L83 1435 aa8.88□□□□□ -0.99
CTNNA1-218ENST00000519768 RUSC2Q8N2Y8 1516 aa8.86□□□□□ -0.99
CTNNA1-218ENST00000519768 SMYD5Q6GMV2 418 aa8.86□□□□□ -0.99
CTNNA1-218ENST00000519768 NUDT7P0C024 238 aa8.85□□□□□ -0.99
CTNNA1-218ENST00000519768 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
CTNNA1-218ENST00000519768 KHSRPQ92945 711 aaKnown RBP eCLIP8.85□□□□□ -0.99
CTNNA1-218ENST00000519768 GLI2P10070 1586 aa8.85□□□□□ -0.99
CTNNA1-218ENST00000519768 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-218ENST00000519768 HSPA2P54652 639 aa8.84□□□□□ -0.99
CTNNA1-218ENST00000519768 PTPRGP23470 1445 aa8.83□□□□□ -1
CTNNA1-218ENST00000519768 WRNQ14191 1432 aaPredicted RBP eCLIP8.83□□□□□ -1
CTNNA1-218ENST00000519768 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
CTNNA1-218ENST00000519768 ABCC2Q92887 1545 aa8.83□□□□□ -1
CTNNA1-218ENST00000519768 EPRSP07814 1512 aaKnown RBP8.82□□□□□ -1
CTNNA1-218ENST00000519768 ERICH3Q5RHP9 1530 aa8.82□□□□□ -1
CTNNA1-218ENST00000519768 CERKQ8TCT0 537 aa8.82□□□□□ -1
CTNNA1-218ENST00000519768 PHF14O94880 888 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms