RNA–Protein interactions for RNA: ENST00000519273.6

ARFGAP1-210, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,176 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-210ENST00000519273 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
ARFGAP1-210ENST00000519273 SHANK2Q9UPX8 1470 aa21.73■■□□□ 1.07
ARFGAP1-210ENST00000519273 NBPF1Q3BBV0 1214 aa21.73■■□□□ 1.07
ARFGAP1-210ENST00000519273 PTPRGP23470 1445 aa21.71■■□□□ 1.07
ARFGAP1-210ENST00000519273 MYBBP1AQ9BQG0 1328 aaKnown RBP21.7■■□□□ 1.06
ARFGAP1-210ENST00000519273 ARHGEF12Q9NZN5 1544 aa21.69■■□□□ 1.06
ARFGAP1-210ENST00000519273 RNF123Q5XPI4 1314 aa21.68■■□□□ 1.06
ARFGAP1-210ENST00000519273 RALBP1Q15311 655 aa21.66■■□□□ 1.06
ARFGAP1-210ENST00000519273 KDM5DQ9BY66 1539 aa21.65■■□□□ 1.06
ARFGAP1-210ENST00000519273 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
ARFGAP1-210ENST00000519273 CCDC144AA2RUR9 1427 aa21.65■■□□□ 1.06
ARFGAP1-210ENST00000519273 CCDC141Q6ZP82 1450 aa21.65■■□□□ 1.06
ARFGAP1-210ENST00000519273 CC2D1BQ5T0F9 858 aaKnown RBP21.64■■□□□ 1.05
ARFGAP1-210ENST00000519273 BRD4O60885 1362 aaPredicted RBP21.64■■□□□ 1.05
ARFGAP1-210ENST00000519273 SAMD9LQ8IVG5 1584 aa21.63■■□□□ 1.05
ARFGAP1-210ENST00000519273 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
ARFGAP1-210ENST00000519273 PRAG1Q86YV5 1406 aa21.6■■□□□ 1.05
ARFGAP1-210ENST00000519273 ARHGEF5Q12774 1597 aa21.6■■□□□ 1.05
ARFGAP1-210ENST00000519273 KTN1Q86UP2 1357 aaKnown RBP21.59■■□□□ 1.05
ARFGAP1-210ENST00000519273 NLRP13Q86W25 1043 aa21.59■■□□□ 1.05
ARFGAP1-210ENST00000519273 SYCP2Q9BX26 1530 aa21.59■■□□□ 1.05
ARFGAP1-210ENST00000519273 EXOC6Q8TAG9 804 aa21.58■■□□□ 1.05
ARFGAP1-210ENST00000519273 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.05
ARFGAP1-210ENST00000519273 PAK3O75914 559 aaPredicted RBP21.57■■□□□ 1.04
ARFGAP1-210ENST00000519273 CDCA7LQ96GN5 454 aa21.57■■□□□ 1.04
ARFGAP1-210ENST00000519273 PLA2R1Q13018 1463 aa21.57■■□□□ 1.04
ARFGAP1-210ENST00000519273 ARHGAP5Q13017 1502 aa21.56■■□□□ 1.04
ARFGAP1-210ENST00000519273 RRP1P56182 461 aaKnown RBP21.56■■□□□ 1.04
ARFGAP1-210ENST00000519273 PER1O15534 1290 aaPredicted RBP21.56■■□□□ 1.04
ARFGAP1-210ENST00000519273 RSPH4AQ5TD94 716 aa21.56■■□□□ 1.04
ARFGAP1-210ENST00000519273 RCAN3Q9UKA8 241 aa21.56■■□□□ 1.04
ARFGAP1-210ENST00000519273 DISP3Q9P2K9 1392 aa21.56■■□□□ 1.04
ARFGAP1-210ENST00000519273 PANK3Q9H999 370 aa21.55■■□□□ 1.04
ARFGAP1-210ENST00000519273 PLEKHH2Q8IVE3 1493 aa21.55■■□□□ 1.04
ARFGAP1-210ENST00000519273 NOP58Q9Y2X3 529 aaKnown RBP21.54■■□□□ 1.04
ARFGAP1-210ENST00000519273 A2MP01023 1474 aa21.54■■□□□ 1.04
ARFGAP1-210ENST00000519273 PARD3Q8TEW0 1356 aa21.53■■□□□ 1.04
ARFGAP1-210ENST00000519273 PREX2Q70Z35 1606 aa21.53■■□□□ 1.04
ARFGAP1-210ENST00000519273 NBR1Q14596 966 aa21.52■■□□□ 1.04
ARFGAP1-210ENST00000519273 TESK2Q96S53 571 aa21.52■■□□□ 1.04
ARFGAP1-210ENST00000519273 TRPM1Q7Z4N2 1603 aa21.52■■□□□ 1.04
ARFGAP1-210ENST00000519273 TTC37Q6PGP7 1564 aa21.51■■□□□ 1.03
ARFGAP1-210ENST00000519273 E9PCH4 1651 aa21.51■■□□□ 1.03
ARFGAP1-210ENST00000519273 PLIN1O60240 522 aa21.5■■□□□ 1.03
ARFGAP1-210ENST00000519273 ANP32AP39687 249 aaKnown RBP21.47■■□□□ 1.03
ARFGAP1-210ENST00000519273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.47■■□□□ 1.031e-6■□□□□ 10.3
ARFGAP1-210ENST00000519273 TMF1P82094 1093 aa21.46■■□□□ 1.03
ARFGAP1-210ENST00000519273 NPM2Q86SE8 214 aaKnown RBP21.46■■□□□ 1.03
ARFGAP1-210ENST00000519273 ERBINQ96RT1 1412 aa21.45■■□□□ 1.02
ARFGAP1-210ENST00000519273 GPRASP1Q5JY77 1395 aa21.45■■□□□ 1.02
ARFGAP1-210ENST00000519273 COL17A1Q9UMD9 1497 aaPredicted RBP21.45■■□□□ 1.02
ARFGAP1-210ENST00000519273 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
ARFGAP1-210ENST00000519273 IPO9Q96P70 1041 aaKnown RBP21.42■■□□□ 1.02
ARFGAP1-210ENST00000519273 PDE3BQ13370 1112 aa21.41■■□□□ 1.02
ARFGAP1-210ENST00000519273 SKAP1Q86WV1 359 aa21.41■■□□□ 1.02
ARFGAP1-210ENST00000519273 UNC13BO14795 1591 aa21.41■■□□□ 1.02
ARFGAP1-210ENST00000519273 PRDM15P57071 1507 aaPredicted RBP21.39■■□□□ 1.01
ARFGAP1-210ENST00000519273 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
ARFGAP1-210ENST00000519273 ADAMTS8Q9UP79 889 aa21.38■■□□□ 1.01
ARFGAP1-210ENST00000519273 CHD1O14646 1710 aa21.36■■□□□ 1.01
ARFGAP1-210ENST00000519273 MYO5CQ9NQX4 1742 aa21.36■■□□□ 1.01
ARFGAP1-210ENST00000519273 DEKP35659 375 aaKnown RBP21.36■■□□□ 1.01
ARFGAP1-210ENST00000519273 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
ARFGAP1-210ENST00000519273 EFCAB2Q5VUJ9 269 aa21.36■■□□□ 1.01
ARFGAP1-210ENST00000519273 AFAP1Q8N556 730 aa21.36■■□□□ 1.01
ARFGAP1-210ENST00000519273 CRBNQ96SW2 442 aa21.36■■□□□ 1.01
ARFGAP1-210ENST00000519273 IQGAP3Q86VI3 1631 aa21.35■■□□□ 1.01
ARFGAP1-210ENST00000519273 WASHC2CQ9Y4E1 1318 aa21.35■■□□□ 1.01
ARFGAP1-210ENST00000519273 KNSTRNQ9Y448 316 aa21.34■■□□□ 1.01
ARFGAP1-210ENST00000519273 TRAPPC8Q9Y2L5 1435 aa21.34■■□□□ 1.01
ARFGAP1-210ENST00000519273 DUOX2Q9NRD8 1548 aa21.34■■□□□ 1.01
ARFGAP1-210ENST00000519273 PDE4AP27815 886 aa21.32■■□□□ 1
ARFGAP1-210ENST00000519273 C20orf194Q5TEA3 1177 aa21.32■■□□□ 1
ARFGAP1-210ENST00000519273 ABCC2Q92887 1545 aa21.31■■□□□ 1
ARFGAP1-210ENST00000519273 PLXNC1O60486 1568 aa21.31■■□□□ 1
ARFGAP1-210ENST00000519273 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
ARFGAP1-210ENST00000519273 BLMP54132 1417 aaPredicted RBP21.3■■□□□ 1
ARFGAP1-210ENST00000519273 MAGI2Q86UL8 1455 aa21.3■■□□□ 1
ARFGAP1-210ENST00000519273 PPP2R1AP30153 589 aa21.3■■□□□ 1
ARFGAP1-210ENST00000519273 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
ARFGAP1-210ENST00000519273 PLCH2O75038 1416 aa21.29■■□□□ 1
ARFGAP1-210ENST00000519273 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
ARFGAP1-210ENST00000519273 WDR43Q15061 677 aaKnown RBP eCLIP21.29■■□□□ 16e-7■■■□□ 17.1
ARFGAP1-210ENST00000519273 EIF2AK4Q9P2K8 1649 aaKnown RBP21.28■■□□□ 1
ARFGAP1-210ENST00000519273 LAMC1P11047 1609 aa21.27■■□□□ 1
ARFGAP1-210ENST00000519273 ATP10AO60312 1499 aa21.26■□□□□ 0.99
ARFGAP1-210ENST00000519273 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
ARFGAP1-210ENST00000519273 AMER1Q5JTC6 1135 aaPredicted RBP21.25■□□□□ 0.99
ARFGAP1-210ENST00000519273 PLEKHH1Q9ULM0 1364 aa21.25■□□□□ 0.99
ARFGAP1-210ENST00000519273 CCDC146Q8IYE0 955 aa21.25■□□□□ 0.99
ARFGAP1-210ENST00000519273 BACH2Q9BYV9 841 aa21.25■□□□□ 0.99
ARFGAP1-210ENST00000519273 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
ARFGAP1-210ENST00000519273 LAS1LQ9Y4W2 734 aaKnown RBP21.21■□□□□ 0.99
ARFGAP1-210ENST00000519273 ZMYM4Q5VZL5 1548 aa21.21■□□□□ 0.99
ARFGAP1-210ENST00000519273 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.98
ARFGAP1-210ENST00000519273 KIF3BO15066 747 aa21.2■□□□□ 0.98
ARFGAP1-210ENST00000519273 RTL5Q5HYW3 569 aaPredicted RBP21.2■□□□□ 0.98
ARFGAP1-210ENST00000519273 ABCC1P33527 1531 aa21.19■□□□□ 0.98
ARFGAP1-210ENST00000519273 RNF17Q9BXT8 1623 aaKnown RBP21.19■□□□□ 0.98
ARFGAP1-210ENST00000519273 EIF5BO60841 1220 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms