RNA–Protein interactions for RNA: ENST00000519245.1

LAMA4-212, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-212ENST00000519245 MFSD10Q14728 455 aa12.29□□□□□ -0.44
LAMA4-212ENST00000519245 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
LAMA4-212ENST00000519245 SOWAHBA6NEL2 793 aa12.25□□□□□ -0.45
LAMA4-212ENST00000519245 LAPTM4BQ86VI4 370 aa12.23□□□□□ -0.45
LAMA4-212ENST00000519245 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
LAMA4-212ENST00000519245 TYW1BQ6NUM6 668 aa12.21□□□□□ -0.45
LAMA4-212ENST00000519245 FBXW7Q969H0 707 aa12.21□□□□□ -0.45
LAMA4-212ENST00000519245 ZFRQ96KR1 1074 aaKnown RBP12.21□□□□□ -0.45
LAMA4-212ENST00000519245 PHF14O94880 888 aa12.2□□□□□ -0.46
LAMA4-212ENST00000519245 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
LAMA4-212ENST00000519245 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
LAMA4-212ENST00000519245 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
LAMA4-212ENST00000519245 ABCC9O60706 1549 aa12.18□□□□□ -0.46
LAMA4-212ENST00000519245 Q6ZNB5 142 aa12.17□□□□□ -0.46
LAMA4-212ENST00000519245 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-212ENST00000519245 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
LAMA4-212ENST00000519245 KCNC4Q03721 635 aa12.14□□□□□ -0.47
LAMA4-212ENST00000519245 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
LAMA4-212ENST00000519245 C6orf132Q5T0Z8 1188 aa12.13□□□□□ -0.47
LAMA4-212ENST00000519245 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
LAMA4-212ENST00000519245 LCE2BO14633 110 aa12.11□□□□□ -0.47
LAMA4-212ENST00000519245 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
LAMA4-212ENST00000519245 EPAS1Q99814 870 aa12.09□□□□□ -0.47
LAMA4-212ENST00000519245 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
LAMA4-212ENST00000519245 CAMK2BQ13554 666 aa12.07□□□□□ -0.48
LAMA4-212ENST00000519245 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
LAMA4-212ENST00000519245 HPS5Q9UPZ3 1129 aa12.07□□□□□ -0.48
LAMA4-212ENST00000519245 DPYSL4O14531 572 aa12.05□□□□□ -0.48
LAMA4-212ENST00000519245 LRCH3Q96II8 777 aa12.05□□□□□ -0.48
LAMA4-212ENST00000519245 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
LAMA4-212ENST00000519245 LAPTM4AQ15012 233 aa12.02□□□□□ -0.49
LAMA4-212ENST00000519245 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
LAMA4-212ENST00000519245 DDX12PQ92771 950 aa12□□□□□ -0.49
LAMA4-212ENST00000519245 GFRA3O60609 400 aa11.97□□□□□ -0.49
LAMA4-212ENST00000519245 TSR1Q2NL82 804 aaKnown RBP11.97□□□□□ -0.49
LAMA4-212ENST00000519245 TJAP1Q5JTD0 557 aa11.97□□□□□ -0.49
LAMA4-212ENST00000519245 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-212ENST00000519245 TRAF7Q6Q0C0 670 aa11.95□□□□□ -0.5
LAMA4-212ENST00000519245 PPP4CP60510 307 aa11.93□□□□□ -0.5
LAMA4-212ENST00000519245 PACS2Q86VP3 889 aa11.93□□□□□ -0.5
LAMA4-212ENST00000519245 NBR1Q14596 966 aa11.92□□□□□ -0.5
LAMA4-212ENST00000519245 PRKD2Q9BZL6 878 aa11.92□□□□□ -0.5
LAMA4-212ENST00000519245 MAP3K7O43318 606 aa11.91□□□□□ -0.5
LAMA4-212ENST00000519245 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
LAMA4-212ENST00000519245 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
LAMA4-212ENST00000519245 C3orf80F5H4A9 247 aa11.9□□□□□ -0.5
LAMA4-212ENST00000519245 SMAPO00193 183 aa11.9□□□□□ -0.5
LAMA4-212ENST00000519245 MTRQ99707 1265 aa11.89□□□□□ -0.51
LAMA4-212ENST00000519245 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
LAMA4-212ENST00000519245 PDIA6Q15084 440 aa11.88□□□□□ -0.51
LAMA4-212ENST00000519245 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
LAMA4-212ENST00000519245 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
LAMA4-212ENST00000519245 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
LAMA4-212ENST00000519245 IL21Q9HBE4 155 aa11.86□□□□□ -0.51
LAMA4-212ENST00000519245 PRSS12P56730 875 aa11.85□□□□□ -0.51
LAMA4-212ENST00000519245 V9GY48 417 aaPredicted RBP11.85□□□□□ -0.51
LAMA4-212ENST00000519245 DCAF8L2P0C7V8 631 aa11.84□□□□□ -0.51
LAMA4-212ENST00000519245 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
LAMA4-212ENST00000519245 TATDN2Q93075 761 aa11.81□□□□□ -0.52
LAMA4-212ENST00000519245 APLP1P51693 650 aa11.8□□□□□ -0.52
LAMA4-212ENST00000519245 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.79□□□□□ -0.52
LAMA4-212ENST00000519245 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
LAMA4-212ENST00000519245 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
LAMA4-212ENST00000519245 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
LAMA4-212ENST00000519245 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
LAMA4-212ENST00000519245 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
LAMA4-212ENST00000519245 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
LAMA4-212ENST00000519245 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
LAMA4-212ENST00000519245 RNF40O75150 1001 aa11.74□□□□□ -0.53
LAMA4-212ENST00000519245 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
LAMA4-212ENST00000519245 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
LAMA4-212ENST00000519245 GRXCR2A6NFK2 248 aa11.7□□□□□ -0.54
LAMA4-212ENST00000519245 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
LAMA4-212ENST00000519245 OSBPP22059 807 aa11.69□□□□□ -0.54
LAMA4-212ENST00000519245 COPS2P61201 443 aa11.68□□□□□ -0.54
LAMA4-212ENST00000519245 ARIH1Q9Y4X5 557 aaPredicted RBP11.68□□□□□ -0.54
LAMA4-212ENST00000519245 TTC13Q8NBP0 860 aa11.67□□□□□ -0.54
LAMA4-212ENST00000519245 ZNF775Q96BV0 537 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-212ENST00000519245 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
LAMA4-212ENST00000519245 E2F4Q16254 413 aa11.65□□□□□ -0.54
LAMA4-212ENST00000519245 SWT1Q5T5J6 900 aaKnown RBP11.65□□□□□ -0.54
LAMA4-212ENST00000519245 TRIM67Q6ZTA4 783 aa11.65□□□□□ -0.54
LAMA4-212ENST00000519245 GGCXP38435 758 aa11.64□□□□□ -0.55
LAMA4-212ENST00000519245 EMID1Q96A84 441 aaPredicted RBP11.63□□□□□ -0.55
LAMA4-212ENST00000519245 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
LAMA4-212ENST00000519245 ZPR1O75312 459 aa11.62□□□□□ -0.55
LAMA4-212ENST00000519245 SLF2Q8IX21 1173 aa11.62□□□□□ -0.55
LAMA4-212ENST00000519245 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
LAMA4-212ENST00000519245 NPDC1Q9NQX5 325 aaPredicted RBP11.62□□□□□ -0.55
LAMA4-212ENST00000519245 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
LAMA4-212ENST00000519245 BBXQ8WY36 941 aaPredicted RBP11.6□□□□□ -0.55
LAMA4-212ENST00000519245 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.55
LAMA4-212ENST00000519245 RNF223E7ERA6 249 aa11.57□□□□□ -0.56
LAMA4-212ENST00000519245 EYA1Q99502 592 aa11.57□□□□□ -0.56
LAMA4-212ENST00000519245 SLC19A1P41440 591 aa11.55□□□□□ -0.56
LAMA4-212ENST00000519245 NACADO15069 1562 aa11.54□□□□□ -0.56
LAMA4-212ENST00000519245 MYT1Q01538 1121 aa11.54□□□□□ -0.56
LAMA4-212ENST00000519245 BLOC1S3Q6QNY0 202 aa11.54□□□□□ -0.56
LAMA4-212ENST00000519245 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
LAMA4-212ENST00000519245 TLL1O43897 1013 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms