RNA–Protein interactions for RNA: ENST00000519205.1

SREK1-205, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-205ENST00000519205 CARMIL2Q6F5E8 1435 aa14.04□□□□□ -0.16
SREK1-205ENST00000519205 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
SREK1-205ENST00000519205 ARHGEF40Q8TER5 1519 aa14.03□□□□□ -0.16
SREK1-205ENST00000519205 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
SREK1-205ENST00000519205 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
SREK1-205ENST00000519205 SNPHO15079 494 aa14.01□□□□□ -0.17
SREK1-205ENST00000519205 UHRF1BP1Q6BDS2 1440 aa14□□□□□ -0.17
SREK1-205ENST00000519205 RGS17Q9UGC6 210 aaPredicted RBP14□□□□□ -0.17
SREK1-205ENST00000519205 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
SREK1-205ENST00000519205 IFNL1Q8IU54 200 aa13.99□□□□□ -0.17
SREK1-205ENST00000519205 MIER1Q8N108 512 aa13.98□□□□□ -0.17
SREK1-205ENST00000519205 TMEM106CQ9BVX2 250 aa13.98□□□□□ -0.17
SREK1-205ENST00000519205 FANCAO15360 1455 aa13.98□□□□□ -0.17
SREK1-205ENST00000519205 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
SREK1-205ENST00000519205 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
SREK1-205ENST00000519205 KIAA0556O60303 1618 aa13.91□□□□□ -0.18
SREK1-205ENST00000519205 POTEAQ6S8J7 498 aa13.91□□□□□ -0.18
SREK1-205ENST00000519205 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
SREK1-205ENST00000519205 OCEL1Q9H607 264 aa13.9□□□□□ -0.18
SREK1-205ENST00000519205 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.9□□□□□ -0.18
SREK1-205ENST00000519205 IQGAP2Q13576 1575 aa13.9□□□□□ -0.18
SREK1-205ENST00000519205 DISP1Q96F81 1524 aa13.9□□□□□ -0.19
SREK1-205ENST00000519205 KRTAP3-3Q9BYR6 98 aa13.89□□□□□ -0.19
SREK1-205ENST00000519205 KRTAP3-2Q9BYR7 98 aa13.89□□□□□ -0.19
SREK1-205ENST00000519205 RICTORQ6R327 1708 aa13.89□□□□□ -0.19
SREK1-205ENST00000519205 SETD1BQ9UPS6 1966 aaKnown RBP13.87□□□□□ -0.19
SREK1-205ENST00000519205 NUBP1P53384 320 aa13.86□□□□□ -0.19
SREK1-205ENST00000519205 NCOA1Q15788 1441 aa13.86□□□□□ -0.19
SREK1-205ENST00000519205 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
SREK1-205ENST00000519205 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
SREK1-205ENST00000519205 CAMSAP1Q5T5Y3 1602 aa13.84□□□□□ -0.19
SREK1-205ENST00000519205 POTEB3A0JP26 581 aa13.84□□□□□ -0.19
SREK1-205ENST00000519205 POTEBQ6S5H4 581 aa13.84□□□□□ -0.19
SREK1-205ENST00000519205 ZFYVE16Q7Z3T8 1539 aa13.84□□□□□ -0.19
SREK1-205ENST00000519205 TOM1O60784 492 aa13.83□□□□□ -0.2
SREK1-205ENST00000519205 EMP3P54852 163 aa13.83□□□□□ -0.2
SREK1-205ENST00000519205 C3P01024 1663 aa13.82□□□□□ -0.2
SREK1-205ENST00000519205 ARHGEF12Q9NZN5 1544 aa13.82□□□□□ -0.2
SREK1-205ENST00000519205 ABCA9Q8IUA7 1624 aa13.82□□□□□ -0.2
SREK1-205ENST00000519205 NEO1Q92859 1461 aa13.8□□□□□ -0.2
SREK1-205ENST00000519205 UPF1Q92900 1129 aaKnown RBP eCLIP13.8□□□□□ -0.2
SREK1-205ENST00000519205 HS3ST6Q96QI5 342 aa13.8□□□□□ -0.2
SREK1-205ENST00000519205 SUPT6HQ7KZ85 1726 aaKnown RBP13.79□□□□□ -0.2
SREK1-205ENST00000519205 PHLDB1Q86UU1 1377 aa13.79□□□□□ -0.2
SREK1-205ENST00000519205 EFCAB5A4FU69 1503 aa13.77□□□□□ -0.21
SREK1-205ENST00000519205 DENND4BO75064 1496 aaPredicted RBP13.77□□□□□ -0.21
SREK1-205ENST00000519205 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
SREK1-205ENST00000519205 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
SREK1-205ENST00000519205 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
SREK1-205ENST00000519205 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
SREK1-205ENST00000519205 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
SREK1-205ENST00000519205 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
SREK1-205ENST00000519205 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
SREK1-205ENST00000519205 ABCA8O94911 1581 aa13.71□□□□□ -0.22
SREK1-205ENST00000519205 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
SREK1-205ENST00000519205 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
SREK1-205ENST00000519205 IGF1RP08069 1367 aa13.7□□□□□ -0.22
SREK1-205ENST00000519205 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
SREK1-205ENST00000519205 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
SREK1-205ENST00000519205 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
SREK1-205ENST00000519205 UGGT2Q9NYU1 1516 aa13.66□□□□□ -0.22
SREK1-205ENST00000519205 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
SREK1-205ENST00000519205 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
SREK1-205ENST00000519205 C9orf84Q5VXU9 1444 aa13.63□□□□□ -0.23
SREK1-205ENST00000519205 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
SREK1-205ENST00000519205 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
SREK1-205ENST00000519205 ATP10AO60312 1499 aa13.61□□□□□ -0.23
SREK1-205ENST00000519205 CPS1P31327 1500 aa13.61□□□□□ -0.23
SREK1-205ENST00000519205 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
SREK1-205ENST00000519205 CFAP74Q9C0B2 1584 aa13.6□□□□□ -0.23
SREK1-205ENST00000519205 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
SREK1-205ENST00000519205 SETBP1Q9Y6X0 1596 aa13.6□□□□□ -0.23
SREK1-205ENST00000519205 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
SREK1-205ENST00000519205 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
SREK1-205ENST00000519205 ATP10BO94823 1461 aa13.58□□□□□ -0.24
SREK1-205ENST00000519205 MAGI2Q86UL8 1455 aa13.57□□□□□ -0.24
SREK1-205ENST00000519205 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
SREK1-205ENST00000519205 PYGBP11216 843 aa13.57□□□□□ -0.24
SREK1-205ENST00000519205 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
SREK1-205ENST00000519205 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
SREK1-205ENST00000519205 PKD2Q13563 968 aa13.55□□□□□ -0.24
SREK1-205ENST00000519205 ZNF142P52746 1687 aaPredicted RBP13.55□□□□□ -0.24
SREK1-205ENST00000519205 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
SREK1-205ENST00000519205 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
SREK1-205ENST00000519205 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
SREK1-205ENST00000519205 LRRC7Q96NW7 1537 aa13.54□□□□□ -0.24
SREK1-205ENST00000519205 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
SREK1-205ENST00000519205 RNF166Q96A37 237 aaPredicted RBP13.53□□□□□ -0.24
SREK1-205ENST00000519205 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
SREK1-205ENST00000519205 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
SREK1-205ENST00000519205 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.25
SREK1-205ENST00000519205 CEP170BQ9Y4F5 1589 aaPredicted RBP13.51□□□□□ -0.25
SREK1-205ENST00000519205 PLA2R1Q13018 1463 aa13.51□□□□□ -0.25
SREK1-205ENST00000519205 STRCP1A6NGW2 1772 aa13.5□□□□□ -0.25
SREK1-205ENST00000519205 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
SREK1-205ENST00000519205 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
SREK1-205ENST00000519205 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
SREK1-205ENST00000519205 CTTNBP2Q8WZ74 1663 aa13.48□□□□□ -0.25
SREK1-205ENST00000519205 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
SREK1-205ENST00000519205 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms