RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
HDAC2-204ENST00000518756 WNT2BQ93097 391 aa11.35□□□□□ -0.59
HDAC2-204ENST00000518756 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
HDAC2-204ENST00000518756 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
HDAC2-204ENST00000518756 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
HDAC2-204ENST00000518756 COL9A1P20849 921 aa11.32□□□□□ -0.6
HDAC2-204ENST00000518756 PROX2Q3B8N5 592 aa11.32□□□□□ -0.6
HDAC2-204ENST00000518756 DDX12PQ92771 950 aa11.29□□□□□ -0.6
HDAC2-204ENST00000518756 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
HDAC2-204ENST00000518756 EPAS1Q99814 870 aa11.28□□□□□ -0.6
HDAC2-204ENST00000518756 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
HDAC2-204ENST00000518756 C6orf132Q5T0Z8 1188 aa11.25□□□□□ -0.61
HDAC2-204ENST00000518756 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
HDAC2-204ENST00000518756 NBR1Q14596 966 aa11.24□□□□□ -0.61
HDAC2-204ENST00000518756 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
HDAC2-204ENST00000518756 PDIA6Q15084 440 aa11.22□□□□□ -0.61
HDAC2-204ENST00000518756 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
HDAC2-204ENST00000518756 MAP3K7O43318 606 aa11.2□□□□□ -0.62
HDAC2-204ENST00000518756 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
HDAC2-204ENST00000518756 BCAMP50895 628 aa11.19□□□□□ -0.62
HDAC2-204ENST00000518756 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
HDAC2-204ENST00000518756 E2F4Q16254 413 aa11.19□□□□□ -0.62
HDAC2-204ENST00000518756 LAPTM4BQ86VI4 370 aa11.19□□□□□ -0.62
HDAC2-204ENST00000518756 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
HDAC2-204ENST00000518756 EN1Q05925 392 aaPredicted RBP11.18□□□□□ -0.62
HDAC2-204ENST00000518756 SPDYE16A6NNV3 312 aaPredicted RBP11.17□□□□□ -0.62
HDAC2-204ENST00000518756 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
HDAC2-204ENST00000518756 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
HDAC2-204ENST00000518756 ONECUT3O60422 494 aaPredicted RBP11.15□□□□□ -0.62
HDAC2-204ENST00000518756 SOWAHBA6NEL2 793 aa11.14□□□□□ -0.63
HDAC2-204ENST00000518756 FAM98CQ17RN3 349 aaKnown RBP11.13□□□□□ -0.63
HDAC2-204ENST00000518756 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
HDAC2-204ENST00000518756 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
HDAC2-204ENST00000518756 IFFO2Q5TF58 517 aa11.11□□□□□ -0.63
HDAC2-204ENST00000518756 A0A0G2JS52 829 aa11.1□□□□□ -0.63
HDAC2-204ENST00000518756 PACS2Q86VP3 889 aa11.1□□□□□ -0.63
HDAC2-204ENST00000518756 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
HDAC2-204ENST00000518756 WBP1LQ9NX94 342 aa11.09□□□□□ -0.63
HDAC2-204ENST00000518756 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
HDAC2-204ENST00000518756 TSKSQ9UJT2 592 aa11.09□□□□□ -0.63
HDAC2-204ENST00000518756 NYAP1Q6ZVC0 841 aa11.07□□□□□ -0.64
HDAC2-204ENST00000518756 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
HDAC2-204ENST00000518756 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
HDAC2-204ENST00000518756 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
HDAC2-204ENST00000518756 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
HDAC2-204ENST00000518756 SMAPO00193 183 aa11.04□□□□□ -0.64
HDAC2-204ENST00000518756 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
HDAC2-204ENST00000518756 TSR3Q9UJK0 312 aaKnown RBP11.04□□□□□ -0.64
HDAC2-204ENST00000518756 PRSS12P56730 875 aa11.03□□□□□ -0.64
HDAC2-204ENST00000518756 CERKQ8TCT0 537 aa11.03□□□□□ -0.64
HDAC2-204ENST00000518756 CDHR5Q9HBB8 845 aa11.03□□□□□ -0.64
HDAC2-204ENST00000518756 RGS20O76081 388 aa11.02□□□□□ -0.65
HDAC2-204ENST00000518756 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
HDAC2-204ENST00000518756 OSBPP22059 807 aa11□□□□□ -0.65
HDAC2-204ENST00000518756 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
HDAC2-204ENST00000518756 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
HDAC2-204ENST00000518756 PNMA3Q9UL41 463 aa11□□□□□ -0.65
HDAC2-204ENST00000518756 KCNC4Q03721 635 aa10.99□□□□□ -0.65
HDAC2-204ENST00000518756 SAMD7Q7Z3H4 446 aa10.99□□□□□ -0.65
HDAC2-204ENST00000518756 PPP4CP60510 307 aa10.98□□□□□ -0.65
HDAC2-204ENST00000518756 RNF40O75150 1001 aa10.97□□□□□ -0.65
HDAC2-204ENST00000518756 TATDN2Q93075 761 aa10.97□□□□□ -0.65
HDAC2-204ENST00000518756 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
HDAC2-204ENST00000518756 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
HDAC2-204ENST00000518756 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
HDAC2-204ENST00000518756 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
HDAC2-204ENST00000518756 HDGFP51858 240 aaKnown RBP10.91□□□□□ -0.66
HDAC2-204ENST00000518756 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
HDAC2-204ENST00000518756 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
HDAC2-204ENST00000518756 MLLT3P42568 568 aaPredicted RBP10.88□□□□□ -0.67
HDAC2-204ENST00000518756 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
HDAC2-204ENST00000518756 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
HDAC2-204ENST00000518756 NPDC1Q9NQX5 325 aaPredicted RBP10.86□□□□□ -0.67
HDAC2-204ENST00000518756 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
HDAC2-204ENST00000518756 MTRQ99707 1265 aa10.85□□□□□ -0.67
HDAC2-204ENST00000518756 TJAP1Q5JTD0 557 aa10.84□□□□□ -0.67
HDAC2-204ENST00000518756 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
HDAC2-204ENST00000518756 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
HDAC2-204ENST00000518756 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
HDAC2-204ENST00000518756 APLP1P51693 650 aa10.82□□□□□ -0.68
HDAC2-204ENST00000518756 SLF2Q8IX21 1173 aa10.82□□□□□ -0.68
HDAC2-204ENST00000518756 KDM2AQ9Y2K7 1162 aa10.82□□□□□ -0.68
HDAC2-204ENST00000518756 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
HDAC2-204ENST00000518756 NECTIN2Q92692 538 aa10.8□□□□□ -0.68
HDAC2-204ENST00000518756 NUTM2FA1L443 756 aa10.78□□□□□ -0.68
HDAC2-204ENST00000518756 COPS2P61201 443 aa10.77□□□□□ -0.69
HDAC2-204ENST00000518756 ZNF516Q92618 1163 aa10.77□□□□□ -0.69
HDAC2-204ENST00000518756 EYA1Q99502 592 aa10.77□□□□□ -0.69
HDAC2-204ENST00000518756 PTGDRQ13258 359 aa10.76□□□□□ -0.69
HDAC2-204ENST00000518756 Q6ZNB5 142 aa10.76□□□□□ -0.69
HDAC2-204ENST00000518756 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
HDAC2-204ENST00000518756 DNAJB2P25686 324 aa10.73□□□□□ -0.69
HDAC2-204ENST00000518756 RBM46Q8TBY0 533 aaKnown RBP10.73□□□□□ -0.69
HDAC2-204ENST00000518756 PRKD2Q9BZL6 878 aa10.73□□□□□ -0.69
HDAC2-204ENST00000518756 SEMA3EO15041 775 aa10.71□□□□□ -0.69
HDAC2-204ENST00000518756 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
HDAC2-204ENST00000518756 PRR14Q9BWN1 585 aa10.71□□□□□ -0.69
HDAC2-204ENST00000518756 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
HDAC2-204ENST00000518756 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
HDAC2-204ENST00000518756 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms