RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 AKNAQ7Z591 1439 aa9.88□□□□□ -0.83
LINC00535-202ENST00000517785 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
LINC00535-202ENST00000517785 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
LINC00535-202ENST00000517785 CEBPAP49715 358 aaPredicted RBP9.87□□□□□ -0.83
LINC00535-202ENST00000517785 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
LINC00535-202ENST00000517785 ZFYVE16Q7Z3T8 1539 aa9.87□□□□□ -0.83
LINC00535-202ENST00000517785 MAMSTRQ6ZN01 415 aa9.85□□□□□ -0.83
LINC00535-202ENST00000517785 DCAF8Q5TAQ9 597 aa9.84□□□□□ -0.83
LINC00535-202ENST00000517785 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
LINC00535-202ENST00000517785 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
LINC00535-202ENST00000517785 EFCAB5A4FU69 1503 aa9.83□□□□□ -0.84
LINC00535-202ENST00000517785 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
LINC00535-202ENST00000517785 COLQQ9Y215 455 aaPredicted RBP9.83□□□□□ -0.84
LINC00535-202ENST00000517785 HECW1Q76N89 1606 aa9.82□□□□□ -0.84
LINC00535-202ENST00000517785 RAPGEF6Q8TEU7 1601 aa9.82□□□□□ -0.84
LINC00535-202ENST00000517785 LTBP4Q8N2S1 1624 aa9.82□□□□□ -0.84
LINC00535-202ENST00000517785 ZMYM4Q5VZL5 1548 aa9.82□□□□□ -0.84
LINC00535-202ENST00000517785 SCUBE2Q9NQ36 999 aa9.81□□□□□ -0.84
LINC00535-202ENST00000517785 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
LINC00535-202ENST00000517785 UHRF1BP1Q6BDS2 1440 aa9.81□□□□□ -0.84
LINC00535-202ENST00000517785 PYGBP11216 843 aa9.8□□□□□ -0.84
LINC00535-202ENST00000517785 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
LINC00535-202ENST00000517785 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
LINC00535-202ENST00000517785 SEC24BO95487 1268 aa9.79□□□□□ -0.84
LINC00535-202ENST00000517785 IER5LQ5T953 404 aa9.79□□□□□ -0.84
LINC00535-202ENST00000517785 FAM9AQ8IZU1 332 aaPredicted RBP9.79□□□□□ -0.84
LINC00535-202ENST00000517785 SETD1BQ9UPS6 1966 aaKnown RBP9.79□□□□□ -0.84
LINC00535-202ENST00000517785 KLHL34Q8N239 644 aa9.78□□□□□ -0.84
LINC00535-202ENST00000517785 PTPRTO14522 1441 aa9.78□□□□□ -0.84
LINC00535-202ENST00000517785 NUP153P49790 1475 aaKnown RBP9.78□□□□□ -0.84
LINC00535-202ENST00000517785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.84
LINC00535-202ENST00000517785 UBAP1LF5GYI3 381 aa9.77□□□□□ -0.85
LINC00535-202ENST00000517785 RANGAP1P46060 587 aaPredicted RBP9.77□□□□□ -0.85
LINC00535-202ENST00000517785 C9orf84Q5VXU9 1444 aa9.76□□□□□ -0.85
LINC00535-202ENST00000517785 MAGI2Q86UL8 1455 aa9.76□□□□□ -0.85
LINC00535-202ENST00000517785 SCAPERQ9BY12 1400 aa9.75□□□□□ -0.85
LINC00535-202ENST00000517785 ATP10AO60312 1499 aa9.75□□□□□ -0.85
LINC00535-202ENST00000517785 IQSEC2Q5JU85 1478 aa9.75□□□□□ -0.85
LINC00535-202ENST00000517785 POTEMA6NI47 508 aa9.75□□□□□ -0.85
LINC00535-202ENST00000517785 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
LINC00535-202ENST00000517785 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
LINC00535-202ENST00000517785 C3P01024 1663 aa9.74□□□□□ -0.85
LINC00535-202ENST00000517785 PLEKHD1A6NEE1 506 aa9.74□□□□□ -0.85
LINC00535-202ENST00000517785 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
LINC00535-202ENST00000517785 PRXQ9BXM0 1461 aa9.73□□□□□ -0.85
LINC00535-202ENST00000517785 POTEGQ6S5H5 508 aa9.73□□□□□ -0.85
LINC00535-202ENST00000517785 PCDHB8Q9UN66 801 aa9.73□□□□□ -0.85
LINC00535-202ENST00000517785 NCOA1Q15788 1441 aa9.73□□□□□ -0.85
LINC00535-202ENST00000517785 GSE1Q14687 1217 aa9.72□□□□□ -0.85
LINC00535-202ENST00000517785 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
LINC00535-202ENST00000517785 CAMSAP1Q5T5Y3 1602 aa9.71□□□□□ -0.86
LINC00535-202ENST00000517785 HSPA1LP34931 641 aa9.7□□□□□ -0.86
LINC00535-202ENST00000517785 IRX5P78411 483 aaPredicted RBP9.7□□□□□ -0.86
LINC00535-202ENST00000517785 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
LINC00535-202ENST00000517785 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
LINC00535-202ENST00000517785 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
LINC00535-202ENST00000517785 CDK13Q14004 1512 aaKnown RBP9.69□□□□□ -0.86
LINC00535-202ENST00000517785 PLCG2P16885 1265 aa9.68□□□□□ -0.86
LINC00535-202ENST00000517785 FAM163AQ96GL9 167 aaPredicted RBP9.68□□□□□ -0.86
LINC00535-202ENST00000517785 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
LINC00535-202ENST00000517785 DIP2CQ9Y2E4 1556 aa9.67□□□□□ -0.86
LINC00535-202ENST00000517785 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
LINC00535-202ENST00000517785 PLCH2O75038 1416 aa9.66□□□□□ -0.86
LINC00535-202ENST00000517785 TRAPPC8Q9Y2L5 1435 aa9.66□□□□□ -0.86
LINC00535-202ENST00000517785 MYO5CQ9NQX4 1742 aa9.66□□□□□ -0.86
LINC00535-202ENST00000517785 CHRM1P11229 460 aaPredicted RBP9.66□□□□□ -0.86
LINC00535-202ENST00000517785 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
LINC00535-202ENST00000517785 IFNLR1Q8IU57 520 aaPredicted RBP9.66□□□□□ -0.86
LINC00535-202ENST00000517785 AFAP1Q8N556 730 aa9.66□□□□□ -0.86
LINC00535-202ENST00000517785 ABCA6Q8N139 1617 aa9.66□□□□□ -0.86
LINC00535-202ENST00000517785 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.87
LINC00535-202ENST00000517785 ZNF518AQ6AHZ1 1483 aa9.64□□□□□ -0.87
LINC00535-202ENST00000517785 KDM5CP41229 1560 aa9.63□□□□□ -0.87
LINC00535-202ENST00000517785 EFCAB2Q5VUJ9 269 aa9.63□□□□□ -0.87
LINC00535-202ENST00000517785 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
LINC00535-202ENST00000517785 OCEL1Q9H607 264 aa9.63□□□□□ -0.87
LINC00535-202ENST00000517785 KIF14Q15058 1648 aa9.63□□□□□ -0.87
LINC00535-202ENST00000517785 ARHGAP5Q13017 1502 aa9.62□□□□□ -0.87
LINC00535-202ENST00000517785 SLAIN1Q8ND83 568 aa9.61□□□□□ -0.87
LINC00535-202ENST00000517785 ATP1B4Q9UN42 357 aaPredicted RBP9.61□□□□□ -0.87
LINC00535-202ENST00000517785 REREQ9P2R6 1566 aa9.61□□□□□ -0.87
LINC00535-202ENST00000517785 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
LINC00535-202ENST00000517785 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
LINC00535-202ENST00000517785 AGLP35573 1532 aa9.59□□□□□ -0.87
LINC00535-202ENST00000517785 ZNF142P52746 1687 aaPredicted RBP9.58□□□□□ -0.88
LINC00535-202ENST00000517785 CNTLNQ9NXG0 1405 aa9.58□□□□□ -0.88
LINC00535-202ENST00000517785 TOM1O60784 492 aa9.58□□□□□ -0.88
LINC00535-202ENST00000517785 PSEN1P49768 467 aa9.58□□□□□ -0.88
LINC00535-202ENST00000517785 TCOF1Q13428 1488 aaKnown RBP9.58□□□□□ -0.88
LINC00535-202ENST00000517785 CEP170BQ9Y4F5 1589 aaPredicted RBP9.58□□□□□ -0.88
LINC00535-202ENST00000517785 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
LINC00535-202ENST00000517785 NPATQ14207 1427 aa9.57□□□□□ -0.88
LINC00535-202ENST00000517785 PKD2Q13563 968 aa9.57□□□□□ -0.88
LINC00535-202ENST00000517785 CIZ1Q9ULV3 898 aaPredicted RBP9.57□□□□□ -0.88
LINC00535-202ENST00000517785 MROH2AA6NES4 1674 aa9.57□□□□□ -0.88
LINC00535-202ENST00000517785 KIDINS220Q9ULH0 1771 aa9.56□□□□□ -0.88
LINC00535-202ENST00000517785 ITSN2Q9NZM3 1697 aa9.56□□□□□ -0.88
LINC00535-202ENST00000517785 PLA2R1Q13018 1463 aa9.56□□□□□ -0.88
LINC00535-202ENST00000517785 MLH3Q9UHC1 1453 aa9.56□□□□□ -0.88
LINC00535-202ENST00000517785 ZMYM3Q14202 1370 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms