RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SND1Q7KZF4 910 aaKnown RBP eCLIP5.98□□□□□ -1.45
RNU4-60P-201ENST00000517239 WWC1Q8IX03 1113 aa5.98□□□□□ -1.45
RNU4-60P-201ENST00000517239 MS4A4AQ96JQ5 239 aa5.97□□□□□ -1.45
RNU4-60P-201ENST00000517239 GDPD2Q9HCC8 539 aa5.97□□□□□ -1.45
RNU4-60P-201ENST00000517239 BANK1Q8NDB2 785 aa5.96□□□□□ -1.46
RNU4-60P-201ENST00000517239 GLMNQ92990 594 aa5.96□□□□□ -1.46
RNU4-60P-201ENST00000517239 PBXIP1Q96AQ6 731 aa5.96□□□□□ -1.46
RNU4-60P-201ENST00000517239 USTQ9Y2C2 406 aa5.96□□□□□ -1.46
RNU4-60P-201ENST00000517239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.95□□□□□ -1.46
RNU4-60P-201ENST00000517239 POM121CA8CG34 1229 aa5.95□□□□□ -1.46
RNU4-60P-201ENST00000517239 SSTR3P32745 418 aaPredicted RBP5.94□□□□□ -1.46
RNU4-60P-201ENST00000517239 ABL2P42684 1182 aa5.94□□□□□ -1.46
RNU4-60P-201ENST00000517239 BEGAINQ9BUH8 593 aa5.94□□□□□ -1.46
RNU4-60P-201ENST00000517239 TBC1D12O60347 775 aa5.93□□□□□ -1.46
RNU4-60P-201ENST00000517239 CLCN1P35523 988 aa5.93□□□□□ -1.46
RNU4-60P-201ENST00000517239 RFC5P40937 340 aa5.93□□□□□ -1.46
RNU4-60P-201ENST00000517239 CCDC125Q86Z20 511 aa5.93□□□□□ -1.46
RNU4-60P-201ENST00000517239 VRTNQ9H8Y1 702 aa5.93□□□□□ -1.46
RNU4-60P-201ENST00000517239 GPHNQ9NQX3 736 aaPredicted RBP5.93□□□□□ -1.46
RNU4-60P-201ENST00000517239 IGSF5Q9NSI5 407 aa5.93□□□□□ -1.46
RNU4-60P-201ENST00000517239 RBM47A0AV96 593 aaKnown RBP5.92□□□□□ -1.46
RNU4-60P-201ENST00000517239 OSBPP22059 807 aa5.92□□□□□ -1.46
RNU4-60P-201ENST00000517239 MDM2Q00987 491 aaPredicted RBP5.92□□□□□ -1.46
RNU4-60P-201ENST00000517239 IFNL1Q8IU54 200 aa5.92□□□□□ -1.46
RNU4-60P-201ENST00000517239 TMEM259Q4ZIN3 620 aa5.91□□□□□ -1.46
RNU4-60P-201ENST00000517239 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.91□□□□□ -1.46
RNU4-60P-201ENST00000517239 TMUB1Q9BVT8 246 aa5.91□□□□□ -1.46
RNU4-60P-201ENST00000517239 DSG2Q14126 1118 aa5.9□□□□□ -1.46
RNU4-60P-201ENST00000517239 HDGFL1Q5TGJ6 251 aa5.9□□□□□ -1.46
RNU4-60P-201ENST00000517239 PRM3Q9NNZ6 103 aa5.9□□□□□ -1.46
RNU4-60P-201ENST00000517239 GPCPD1Q9NPB8 672 aa5.9□□□□□ -1.46
RNU4-60P-201ENST00000517239 MAP3K9P80192 1104 aa5.89□□□□□ -1.47
RNU4-60P-201ENST00000517239 MYSM1Q5VVJ2 828 aa5.89□□□□□ -1.47
RNU4-60P-201ENST00000517239 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
RNU4-60P-201ENST00000517239 MRRFQ96E11 262 aaKnown RBP5.89□□□□□ -1.47
RNU4-60P-201ENST00000517239 KIAA1522Q9P206 1035 aaPredicted RBP5.89□□□□□ -1.47
RNU4-60P-201ENST00000517239 CANXP27824 592 aaKnown RBP5.88□□□□□ -1.47
RNU4-60P-201ENST00000517239 CLK2P49760 499 aaKnown RBP5.88□□□□□ -1.47
RNU4-60P-201ENST00000517239 SRPK2P78362 688 aaKnown RBP5.88□□□□□ -1.47
RNU4-60P-201ENST00000517239 CFAP70Q5T0N1 1121 aa5.88□□□□□ -1.47
RNU4-60P-201ENST00000517239 MTMR14Q8NCE2 650 aa5.88□□□□□ -1.47
RNU4-60P-201ENST00000517239 CCDC61Q9Y6R9 512 aa5.88□□□□□ -1.47
RNU4-60P-201ENST00000517239 SMARCA5O60264 1052 aaPredicted RBP5.87□□□□□ -1.47
RNU4-60P-201ENST00000517239 PTGDRQ13258 359 aa5.87□□□□□ -1.47
RNU4-60P-201ENST00000517239 FBXO31Q5XUX0 539 aaPredicted RBP5.87□□□□□ -1.47
RNU4-60P-201ENST00000517239 DRC1Q96MC2 740 aa5.87□□□□□ -1.47
RNU4-60P-201ENST00000517239 TBC1D2BQ9UPU7 963 aa5.87□□□□□ -1.47
RNU4-60P-201ENST00000517239 BRD2P25440 801 aaKnown RBP5.86□□□□□ -1.47
RNU4-60P-201ENST00000517239 GOLGA2Q08379 1002 aa5.86□□□□□ -1.47
RNU4-60P-201ENST00000517239 CDCA8Q53HL2 280 aa5.86□□□□□ -1.47
RNU4-60P-201ENST00000517239 DDX12PQ92771 950 aa5.86□□□□□ -1.47
RNU4-60P-201ENST00000517239 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
RNU4-60P-201ENST00000517239 MAP3K13O43283 966 aa5.85□□□□□ -1.47
RNU4-60P-201ENST00000517239 PPP1R12CQ9BZL4 782 aa5.85□□□□□ -1.47
RNU4-60P-201ENST00000517239 PPP1R1BQ9UD71 204 aaPredicted RBP5.85□□□□□ -1.47
RNU4-60P-201ENST00000517239 LMOD1P29536 600 aaPredicted RBP5.84□□□□□ -1.47
RNU4-60P-201ENST00000517239 TXNDC2Q86VQ3 553 aa5.84□□□□□ -1.47
RNU4-60P-201ENST00000517239 SPATA32Q96LK8 384 aa5.84□□□□□ -1.47
RNU4-60P-201ENST00000517239 PHOX2BQ99453 314 aa5.84□□□□□ -1.47
RNU4-60P-201ENST00000517239 FAM217BQ9NTX9 383 aaPredicted RBP5.84□□□□□ -1.47
RNU4-60P-201ENST00000517239 GNEQ9Y223 722 aaKnown RBP5.84□□□□□ -1.47
RNU4-60P-201ENST00000517239 TMEM88BA6NKF7 163 aa5.83□□□□□ -1.48
RNU4-60P-201ENST00000517239 PRIM1P49642 420 aaKnown RBP5.83□□□□□ -1.48
RNU4-60P-201ENST00000517239 PPP2R2DQ66LE6 453 aa5.83□□□□□ -1.48
RNU4-60P-201ENST00000517239 FAM9AQ8IZU1 332 aaPredicted RBP5.83□□□□□ -1.48
RNU4-60P-201ENST00000517239 ADAMTS19Q8TE59 1207 aa5.83□□□□□ -1.48
RNU4-60P-201ENST00000517239 AKT1S1Q96B36 256 aa5.83□□□□□ -1.48
RNU4-60P-201ENST00000517239 TBC1D2Q9BYX2 928 aa5.83□□□□□ -1.48
RNU4-60P-201ENST00000517239 ARID4BQ4LE39 1312 aaPredicted RBP5.82□□□□□ -1.48
RNU4-60P-201ENST00000517239 TCF3P15923 654 aa5.82□□□□□ -1.48
RNU4-60P-201ENST00000517239 CHADLQ6NUI6 762 aa5.82□□□□□ -1.48
RNU4-60P-201ENST00000517239 PLPP6Q8IY26 295 aa5.82□□□□□ -1.48
RNU4-60P-201ENST00000517239 TMC2Q8TDI7 906 aa5.82□□□□□ -1.48
RNU4-60P-201ENST00000517239 SREK1Q8WXA9 508 aaKnown RBP5.82□□□□□ -1.48
RNU4-60P-201ENST00000517239 LIMD1Q9UGP4 676 aa5.82□□□□□ -1.48
RNU4-60P-201ENST00000517239 PALM3A6NDB9 673 aaPredicted RBP5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 ZNF16P17020 682 aaPredicted RBP5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 PTGER2P43116 358 aa5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 FOXK1P85037 733 aa5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 REM2Q8IYK8 340 aaPredicted RBP5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 CCER1Q8TC90 406 aaPredicted RBP5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 NLRP7Q8WX94 980 aa5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 SIRT1Q96EB6 747 aa5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 BCL2L13Q9BXK5 485 aa5.81□□□□□ -1.48
RNU4-60P-201ENST00000517239 AP1G2O75843 785 aa5.8□□□□□ -1.48
RNU4-60P-201ENST00000517239 ATG7O95352 703 aa5.8□□□□□ -1.48
RNU4-60P-201ENST00000517239 NCLP19338 710 aaKnown RBP5.8□□□□□ -1.48
RNU4-60P-201ENST00000517239 ERCC3P19447 782 aa5.8□□□□□ -1.48
RNU4-60P-201ENST00000517239 RIC3Q7Z5B4 369 aa5.8□□□□□ -1.48
RNU4-60P-201ENST00000517239 TFIP11Q9UBB9 837 aaKnown RBP5.8□□□□□ -1.48
RNU4-60P-201ENST00000517239 CADPSQ9ULU8 1353 aa5.8□□□□□ -1.48
RNU4-60P-201ENST00000517239 DIXDC1Q155Q3 683 aa5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 TSR1Q2NL82 804 aaKnown RBP5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 B4GALNT3Q6L9W6 998 aa5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 ANKRD13AQ8IZ07 590 aa5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 ZNF710Q8N1W2 664 aa5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 UPF1Q92900 1129 aaKnown RBP eCLIP5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 KIF12Q96FN5 646 aa5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 FARP1Q9Y4F1 1045 aaPredicted RBP5.79□□□□□ -1.48
RNU4-60P-201ENST00000517239 CSPP1Q1MSJ5 1256 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms