RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 COL9A1P20849 921 aa6.89□□□□□ -1.31
RNU6-1338P-201ENST00000516328 FBXW7Q969H0 707 aa6.89□□□□□ -1.31
RNU6-1338P-201ENST00000516328 ANKK1Q8NFD2 765 aa6.88□□□□□ -1.31
RNU6-1338P-201ENST00000516328 CAMK2BQ13554 666 aa6.86□□□□□ -1.31
RNU6-1338P-201ENST00000516328 LAPTM4BQ86VI4 370 aa6.86□□□□□ -1.31
RNU6-1338P-201ENST00000516328 DPYSL4O14531 572 aa6.85□□□□□ -1.31
RNU6-1338P-201ENST00000516328 BCAMP50895 628 aa6.85□□□□□ -1.31
RNU6-1338P-201ENST00000516328 EPAS1Q99814 870 aa6.85□□□□□ -1.31
RNU6-1338P-201ENST00000516328 KIAA1468Q9P260 1216 aa6.85□□□□□ -1.31
RNU6-1338P-201ENST00000516328 SOWAHBA6NEL2 793 aa6.84□□□□□ -1.31
RNU6-1338P-201ENST00000516328 ONECUT3O60422 494 aaPredicted RBP6.84□□□□□ -1.31
RNU6-1338P-201ENST00000516328 C6orf132Q5T0Z8 1188 aa6.84□□□□□ -1.31
RNU6-1338P-201ENST00000516328 ZFRQ96KR1 1074 aaKnown RBP6.83□□□□□ -1.32
RNU6-1338P-201ENST00000516328 IRX2Q9BZI1 471 aaPredicted RBP6.83□□□□□ -1.32
RNU6-1338P-201ENST00000516328 ITGBL1O95965 494 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1338P-201ENST00000516328 RBM33Q96EV2 1170 aaKnown RBP6.82□□□□□ -1.32
RNU6-1338P-201ENST00000516328 SEPT9Q9UHD8 586 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1338P-201ENST00000516328 TRIM6-TRIM34B2RNG4 842 aa6.81□□□□□ -1.32
RNU6-1338P-201ENST00000516328 NYAP1Q6ZVC0 841 aa6.8□□□□□ -1.32
RNU6-1338P-201ENST00000516328 DDX12PQ92771 950 aa6.8□□□□□ -1.32
RNU6-1338P-201ENST00000516328 FAM98CQ17RN3 349 aaKnown RBP6.79□□□□□ -1.32
RNU6-1338P-201ENST00000516328 WBP1LQ9NX94 342 aa6.79□□□□□ -1.32
RNU6-1338P-201ENST00000516328 EN1Q05925 392 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1338P-201ENST00000516328 NBR1Q14596 966 aa6.77□□□□□ -1.33
RNU6-1338P-201ENST00000516328 BBXQ8WY36 941 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1338P-201ENST00000516328 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1338P-201ENST00000516328 MAP3K7O43318 606 aa6.76□□□□□ -1.33
RNU6-1338P-201ENST00000516328 KCNC4Q03721 635 aa6.76□□□□□ -1.33
RNU6-1338P-201ENST00000516328 LRCH3Q96II8 777 aa6.76□□□□□ -1.33
RNU6-1338P-201ENST00000516328 TSR3Q9UJK0 312 aaKnown RBP6.76□□□□□ -1.33
RNU6-1338P-201ENST00000516328 HPS5Q9UPZ3 1129 aa6.76□□□□□ -1.33
RNU6-1338P-201ENST00000516328 PDIA6Q15084 440 aa6.75□□□□□ -1.33
RNU6-1338P-201ENST00000516328 TSR1Q2NL82 804 aaKnown RBP6.75□□□□□ -1.33
RNU6-1338P-201ENST00000516328 TSKSQ9UJT2 592 aa6.75□□□□□ -1.33
RNU6-1338P-201ENST00000516328 SPDYE16A6NNV3 312 aaPredicted RBP6.74□□□□□ -1.33
RNU6-1338P-201ENST00000516328 PACS2Q86VP3 889 aa6.74□□□□□ -1.33
RNU6-1338P-201ENST00000516328 SPRYD3Q8NCJ5 442 aa6.71□□□□□ -1.34
RNU6-1338P-201ENST00000516328 SMAPO00193 183 aa6.7□□□□□ -1.34
RNU6-1338P-201ENST00000516328 PPP4CP60510 307 aa6.7□□□□□ -1.34
RNU6-1338P-201ENST00000516328 E2F4Q16254 413 aa6.7□□□□□ -1.34
RNU6-1338P-201ENST00000516328 CDCA7LQ96GN5 454 aa6.7□□□□□ -1.34
RNU6-1338P-201ENST00000516328 PRSS12P56730 875 aa6.69□□□□□ -1.34
RNU6-1338P-201ENST00000516328 Q6ZNB5 142 aa6.69□□□□□ -1.34
RNU6-1338P-201ENST00000516328 SAMD7Q7Z3H4 446 aa6.69□□□□□ -1.34
RNU6-1338P-201ENST00000516328 CERKQ8TCT0 537 aa6.69□□□□□ -1.34
RNU6-1338P-201ENST00000516328 FAM198AQ9UFP1 575 aa6.69□□□□□ -1.34
RNU6-1338P-201ENST00000516328 GRXCR2A6NFK2 248 aa6.68□□□□□ -1.34
RNU6-1338P-201ENST00000516328 PRIM1P49642 420 aaKnown RBP6.68□□□□□ -1.34
RNU6-1338P-201ENST00000516328 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.68□□□□□ -1.34
RNU6-1338P-201ENST00000516328 NBPF26B4DH59 902 aa6.67□□□□□ -1.34
RNU6-1338P-201ENST00000516328 TATDN2Q93075 761 aa6.67□□□□□ -1.34
RNU6-1338P-201ENST00000516328 WDR70Q9NW82 654 aa6.67□□□□□ -1.34
RNU6-1338P-201ENST00000516328 PNMA3Q9UL41 463 aa6.67□□□□□ -1.34
RNU6-1338P-201ENST00000516328 ARIH1Q9Y4X5 557 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1338P-201ENST00000516328 C3orf80F5H4A9 247 aa6.66□□□□□ -1.34
RNU6-1338P-201ENST00000516328 TJAP1Q5JTD0 557 aa6.66□□□□□ -1.34
RNU6-1338P-201ENST00000516328 CDHR5Q9HBB8 845 aa6.65□□□□□ -1.34
RNU6-1338P-201ENST00000516328 OSBPP22059 807 aa6.64□□□□□ -1.35
RNU6-1338P-201ENST00000516328 NUDT18Q6ZVK8 323 aa6.64□□□□□ -1.35
RNU6-1338P-201ENST00000516328 CFAP44Q96MT7 982 aa6.64□□□□□ -1.35
RNU6-1338P-201ENST00000516328 MTRQ99707 1265 aa6.64□□□□□ -1.35
RNU6-1338P-201ENST00000516328 RNF40O75150 1001 aa6.63□□□□□ -1.35
RNU6-1338P-201ENST00000516328 HDGFP51858 240 aaKnown RBP6.63□□□□□ -1.35
RNU6-1338P-201ENST00000516328 LAPTM4AQ15012 233 aa6.63□□□□□ -1.35
RNU6-1338P-201ENST00000516328 IL21Q9HBE4 155 aa6.63□□□□□ -1.35
RNU6-1338P-201ENST00000516328 RBM27Q9P2N5 1060 aaKnown RBP6.63□□□□□ -1.35
RNU6-1338P-201ENST00000516328 PAXIP1Q6ZW49 1069 aaPredicted RBP6.62□□□□□ -1.35
RNU6-1338P-201ENST00000516328 PPP1R18Q6NYC8 613 aa6.61□□□□□ -1.35
RNU6-1338P-201ENST00000516328 PRKD2Q9BZL6 878 aa6.61□□□□□ -1.35
RNU6-1338P-201ENST00000516328 GFRA3O60609 400 aa6.6□□□□□ -1.35
RNU6-1338P-201ENST00000516328 APLP1P51693 650 aa6.6□□□□□ -1.35
RNU6-1338P-201ENST00000516328 ZNF516Q92618 1163 aa6.6□□□□□ -1.35
RNU6-1338P-201ENST00000516328 PADI6Q6TGC4 694 aa6.59□□□□□ -1.35
RNU6-1338P-201ENST00000516328 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.59□□□□□ -1.35
RNU6-1338P-201ENST00000516328 SWT1Q5T5J6 900 aaKnown RBP6.58□□□□□ -1.36
RNU6-1338P-201ENST00000516328 TRAF7Q6Q0C0 670 aa6.58□□□□□ -1.36
RNU6-1338P-201ENST00000516328 TTC13Q8NBP0 860 aa6.58□□□□□ -1.36
RNU6-1338P-201ENST00000516328 NECTIN2Q92692 538 aa6.58□□□□□ -1.36
RNU6-1338P-201ENST00000516328 LCE2BO14633 110 aa6.57□□□□□ -1.36
RNU6-1338P-201ENST00000516328 AMER1Q5JTC6 1135 aaPredicted RBP6.57□□□□□ -1.36
RNU6-1338P-201ENST00000516328 SLF2Q8IX21 1173 aa6.57□□□□□ -1.36
RNU6-1338P-201ENST00000516328 NPDC1Q9NQX5 325 aaPredicted RBP6.57□□□□□ -1.36
RNU6-1338P-201ENST00000516328 V9GY48 417 aaPredicted RBP6.57□□□□□ -1.36
RNU6-1338P-201ENST00000516328 NRG2O14511 850 aaPredicted RBP6.56□□□□□ -1.36
RNU6-1338P-201ENST00000516328 NKX2-3Q8TAU0 364 aa6.56□□□□□ -1.36
RNU6-1338P-201ENST00000516328 COPS2P61201 443 aa6.55□□□□□ -1.36
RNU6-1338P-201ENST00000516328 SLC4A3P48751 1232 aa6.54□□□□□ -1.36
RNU6-1338P-201ENST00000516328 GGCXP38435 758 aa6.53□□□□□ -1.36
RNU6-1338P-201ENST00000516328 EYA1Q99502 592 aa6.53□□□□□ -1.36
RNU6-1338P-201ENST00000516328 ZPR1O75312 459 aa6.52□□□□□ -1.37
RNU6-1338P-201ENST00000516328 PRR14Q9BWN1 585 aa6.51□□□□□ -1.37
RNU6-1338P-201ENST00000516328 RTN4Q9NQC3 1192 aaKnown RBP6.51□□□□□ -1.37
RNU6-1338P-201ENST00000516328 MLLT3P42568 568 aaPredicted RBP6.5□□□□□ -1.37
RNU6-1338P-201ENST00000516328 ARHGEF1Q92888 912 aaKnown RBP6.5□□□□□ -1.37
RNU6-1338P-201ENST00000516328 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
RNU6-1338P-201ENST00000516328 PDZRN3Q9UPQ7 1066 aa6.5□□□□□ -1.37
RNU6-1338P-201ENST00000516328 PCDHB3Q9Y5E6 796 aa6.5□□□□□ -1.37
RNU6-1338P-201ENST00000516328 DNAJB2P25686 324 aa6.49□□□□□ -1.37
RNU6-1338P-201ENST00000516328 PTGDRQ13258 359 aa6.48□□□□□ -1.37
RNU6-1338P-201ENST00000516328 BLOC1S3Q6QNY0 202 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms