RNA–Protein interactions for RNA: ENST00000515013.5

PRDM8-210, Transcript of PR/SET domain 8, humanhuman

TSL 1 (best)

Gene PRDM8, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-210ENST00000515013 MS4A1P11836 297 aa27.78■■■□□ 2.04
PRDM8-210ENST00000515013 RRP1P56182 461 aaKnown RBP27.78■■■□□ 2.04
PRDM8-210ENST00000515013 EXOC6Q8TAG9 804 aa27.78■■■□□ 2.04
PRDM8-210ENST00000515013 ADGRL2O95490 1459 aa27.77■■■□□ 2.04
PRDM8-210ENST00000515013 KIAA1107Q9UPP5 1409 aa27.77■■■□□ 2.04
PRDM8-210ENST00000515013 BRPF3Q9ULD4 1205 aa27.77■■■□□ 2.04
PRDM8-210ENST00000515013 ABCC10Q5T3U5 1492 aa27.76■■■□□ 2.04
PRDM8-210ENST00000515013 POLR3GLQ9BT43 218 aa27.76■■■□□ 2.03
PRDM8-210ENST00000515013 NUP155O75694 1391 aa27.73■■■□□ 2.03
PRDM8-210ENST00000515013 C9orf84Q5VXU9 1444 aa27.73■■■□□ 2.03
PRDM8-210ENST00000515013 GSE1Q14687 1217 aa27.72■■■□□ 2.03
PRDM8-210ENST00000515013 TMC1Q8TDI8 760 aa27.7■■■□□ 2.03
PRDM8-210ENST00000515013 MBD5Q9P267 1494 aa27.68■■■□□ 2.02
PRDM8-210ENST00000515013 PTPRGP23470 1445 aa27.67■■■□□ 2.02
PRDM8-210ENST00000515013 TSPY4P0CV99 314 aa27.67■■■□□ 2.02
PRDM8-210ENST00000515013 TSPY10P0CW01 314 aa27.67■■■□□ 2.02
PRDM8-210ENST00000515013 DDRGK1Q96HY6 314 aa27.66■■■□□ 2.02
PRDM8-210ENST00000515013 RCAN3Q9UKA8 241 aa27.65■■■□□ 2.02
PRDM8-210ENST00000515013 KDM2AQ9Y2K7 1162 aa27.65■■■□□ 2.02
PRDM8-210ENST00000515013 USP47Q96K76 1375 aa27.65■■■□□ 2.02
PRDM8-210ENST00000515013 LRPPRCP42704 1394 aaKnown RBP27.64■■■□□ 2.02
PRDM8-210ENST00000515013 BCORL1Q5H9F3 1711 aa27.63■■■□□ 2.01
PRDM8-210ENST00000515013 KIF15Q9NS87 1388 aa27.63■■■□□ 2.01
PRDM8-210ENST00000515013 NFKBIBQ15653 356 aa27.62■■■□□ 2.01
PRDM8-210ENST00000515013 ARID4BQ4LE39 1312 aaPredicted RBP27.6■■■□□ 2.01
PRDM8-210ENST00000515013 FRAT1Q92837 279 aaPredicted RBP27.57■■■□□ 2
PRDM8-210ENST00000515013 SHANK2Q9UPX8 1470 aa27.57■■■□□ 2
PRDM8-210ENST00000515013 EIF5BO60841 1220 aaKnown RBP27.54■■■□□ 2
PRDM8-210ENST00000515013 SAMD9LQ8IVG5 1584 aa27.54■■■□□ 2
PRDM8-210ENST00000515013 BRD4O60885 1362 aaPredicted RBP27.54■■■□□ 2
PRDM8-210ENST00000515013 DCAF11Q8TEB1 546 aa27.53■■■□□ 2
PRDM8-210ENST00000515013 ROCK2O75116 1388 aaKnown RBP27.53■■■□□ 2
PRDM8-210ENST00000515013 CDC42BPBQ9Y5S2 1711 aa27.53■■■□□ 2
PRDM8-210ENST00000515013 CARD11Q9BXL7 1154 aa27.52■■■□□ 2
PRDM8-210ENST00000515013 KDM5CP41229 1560 aa27.51■■■□□ 2
PRDM8-210ENST00000515013 CHD1O14646 1710 aa27.51■■□□□ 1.99
PRDM8-210ENST00000515013 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
PRDM8-210ENST00000515013 MYBBP1AQ9BQG0 1328 aaKnown RBP27.49■■□□□ 1.99
PRDM8-210ENST00000515013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.48■■□□□ 1.99
PRDM8-210ENST00000515013 PDE3BQ13370 1112 aa27.48■■□□□ 1.99
PRDM8-210ENST00000515013 SKAP1Q86WV1 359 aa27.48■■□□□ 1.99
PRDM8-210ENST00000515013 ST20-MTHFSA0A0A6YYL1 179 aa27.47■■□□□ 1.99
PRDM8-210ENST00000515013 SLC4A3P48751 1232 aa27.47■■□□□ 1.99
PRDM8-210ENST00000515013 CCDC141Q6ZP82 1450 aa27.46■■□□□ 1.99
PRDM8-210ENST00000515013 ARHGEF5Q12774 1597 aa27.45■■□□□ 1.98
PRDM8-210ENST00000515013 SYCP2Q9BX26 1530 aa27.45■■□□□ 1.98
PRDM8-210ENST00000515013 TTC37Q6PGP7 1564 aa27.44■■□□□ 1.98
PRDM8-210ENST00000515013 RALBP1Q15311 655 aa27.44■■□□□ 1.98
PRDM8-210ENST00000515013 RGL3Q3MIN7 710 aa27.44■■□□□ 1.98
PRDM8-210ENST00000515013 KTN1Q86UP2 1357 aaKnown RBP27.44■■□□□ 1.98
PRDM8-210ENST00000515013 UHRF1BP1Q6BDS2 1440 aa27.44■■□□□ 1.98
PRDM8-210ENST00000515013 PREX2Q70Z35 1606 aa27.44■■□□□ 1.98
PRDM8-210ENST00000515013 RALGAPBQ86X10 1494 aa27.43■■□□□ 1.98
PRDM8-210ENST00000515013 KDM5DQ9BY66 1539 aa27.43■■□□□ 1.98
PRDM8-210ENST00000515013 DAXXQ9UER7 740 aaPredicted RBP27.42■■□□□ 1.98
PRDM8-210ENST00000515013 FAM135AQ9P2D6 1515 aa27.41■■□□□ 1.98
PRDM8-210ENST00000515013 ARHGAP5Q13017 1502 aa27.4■■□□□ 1.98
PRDM8-210ENST00000515013 PLIN1O60240 522 aa27.4■■□□□ 1.98
PRDM8-210ENST00000515013 RSPH6AQ9H0K4 717 aa27.4■■□□□ 1.98
PRDM8-210ENST00000515013 CRBNQ96SW2 442 aa27.39■■□□□ 1.97
PRDM8-210ENST00000515013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.39■■□□□ 1.97
PRDM8-210ENST00000515013 CDCA7LQ96GN5 454 aa27.38■■□□□ 1.97
PRDM8-210ENST00000515013 FAM43AQ8N2R8 423 aa27.38■■□□□ 1.97
PRDM8-210ENST00000515013 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
PRDM8-210ENST00000515013 NBPF1Q3BBV0 1214 aa27.35■■□□□ 1.97
PRDM8-210ENST00000515013 FRAT2O75474 233 aaPredicted RBP27.32■■□□□ 1.96
PRDM8-210ENST00000515013 NLRP13Q86W25 1043 aa27.31■■□□□ 1.96
PRDM8-210ENST00000515013 PLA2R1Q13018 1463 aa27.31■■□□□ 1.96
PRDM8-210ENST00000515013 PLEKHH2Q8IVE3 1493 aa27.31■■□□□ 1.96
PRDM8-210ENST00000515013 CCDC144AA2RUR9 1427 aa27.3■■□□□ 1.96
PRDM8-210ENST00000515013 KDM2BQ8NHM5 1336 aa27.3■■□□□ 1.96
PRDM8-210ENST00000515013 SHROOM2Q13796 1616 aa27.29■■□□□ 1.96
PRDM8-210ENST00000515013 RSPH4AQ5TD94 716 aa27.29■■□□□ 1.96
PRDM8-210ENST00000515013 FAM161AQ3B820 660 aa27.27■■□□□ 1.96
PRDM8-210ENST00000515013 ABCC2Q92887 1545 aa27.26■■□□□ 1.95
PRDM8-210ENST00000515013 C8orf34Q49A92 452 aa27.25■■□□□ 1.95
PRDM8-210ENST00000515013 PRAG1Q86YV5 1406 aa27.24■■□□□ 1.95
PRDM8-210ENST00000515013 PARD3Q8TEW0 1356 aa27.24■■□□□ 1.95
PRDM8-210ENST00000515013 CENPQQ7L2Z9 268 aaPredicted RBP27.23■■□□□ 1.95
PRDM8-210ENST00000515013 C20orf194Q5TEA3 1177 aa27.22■■□□□ 1.95
PRDM8-210ENST00000515013 MYO5CQ9NQX4 1742 aa27.21■■□□□ 1.95
PRDM8-210ENST00000515013 E9PCH4 1651 aa27.21■■□□□ 1.95
PRDM8-210ENST00000515013 A2MP01023 1474 aa27.2■■□□□ 1.95
PRDM8-210ENST00000515013 UNC13BO14795 1591 aa27.18■■□□□ 1.94
PRDM8-210ENST00000515013 TRPM1Q7Z4N2 1603 aa27.17■■□□□ 1.94
PRDM8-210ENST00000515013 MAST1Q9Y2H9 1570 aa27.17■■□□□ 1.94
PRDM8-210ENST00000515013 BLMP54132 1417 aaPredicted RBP27.15■■□□□ 1.94
PRDM8-210ENST00000515013 INSRP06213 1382 aa27.15■■□□□ 1.94
PRDM8-210ENST00000515013 TRAPPC8Q9Y2L5 1435 aa27.15■■□□□ 1.94
PRDM8-210ENST00000515013 AFAP1Q8N556 730 aa27.13■■□□□ 1.93
PRDM8-210ENST00000515013 ZCCHC11Q5TAX3 1644 aaKnown RBP27.12■■□□□ 1.93
PRDM8-210ENST00000515013 PLCH2O75038 1416 aa27.12■■□□□ 1.93
PRDM8-210ENST00000515013 PLXNC1O60486 1568 aa27.11■■□□□ 1.93
PRDM8-210ENST00000515013 EFCAB2Q5VUJ9 269 aa27.11■■□□□ 1.93
PRDM8-210ENST00000515013 DISP3Q9P2K9 1392 aa27.11■■□□□ 1.93
PRDM8-210ENST00000515013 IQGAP3Q86VI3 1631 aa27.1■■□□□ 1.93
PRDM8-210ENST00000515013 ZMYM4Q5VZL5 1548 aa27.1■■□□□ 1.93
PRDM8-210ENST00000515013 PER1O15534 1290 aaPredicted RBP27.09■■□□□ 1.93
PRDM8-210ENST00000515013 TESK2Q96S53 571 aa27.09■■□□□ 1.93
PRDM8-210ENST00000515013 DUOX2Q9NRD8 1548 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms