RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 CAMK2BQ13554 666 aa12.44□□□□□ -0.42
NEDD4-211ENST00000514893 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
NEDD4-211ENST00000514893 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
NEDD4-211ENST00000514893 COL9A1P20849 921 aa12.42□□□□□ -0.42
NEDD4-211ENST00000514893 LAPTM4BQ86VI4 370 aa12.42□□□□□ -0.42
NEDD4-211ENST00000514893 PROX2Q3B8N5 592 aa12.41□□□□□ -0.42
NEDD4-211ENST00000514893 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
NEDD4-211ENST00000514893 C6orf132Q5T0Z8 1188 aa12.39□□□□□ -0.43
NEDD4-211ENST00000514893 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
NEDD4-211ENST00000514893 DPYSL4O14531 572 aa12.38□□□□□ -0.43
NEDD4-211ENST00000514893 A0A0G2JS52 829 aa12.34□□□□□ -0.43
NEDD4-211ENST00000514893 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
NEDD4-211ENST00000514893 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.44
NEDD4-211ENST00000514893 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.44
NEDD4-211ENST00000514893 DDX12PQ92771 950 aa12.31□□□□□ -0.44
NEDD4-211ENST00000514893 RBM33Q96EV2 1170 aaKnown RBP12.31□□□□□ -0.44
NEDD4-211ENST00000514893 TRIM6-TRIM34B2RNG4 842 aa12.3□□□□□ -0.44
NEDD4-211ENST00000514893 BCAMP50895 628 aa12.3□□□□□ -0.44
NEDD4-211ENST00000514893 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
NEDD4-211ENST00000514893 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
NEDD4-211ENST00000514893 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
NEDD4-211ENST00000514893 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
NEDD4-211ENST00000514893 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
NEDD4-211ENST00000514893 PACS2Q86VP3 889 aa12.27□□□□□ -0.45
NEDD4-211ENST00000514893 SEPT9Q9UHD8 586 aaPredicted RBP12.26□□□□□ -0.45
NEDD4-211ENST00000514893 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
NEDD4-211ENST00000514893 MAP3K7O43318 606 aa12.23□□□□□ -0.45
NEDD4-211ENST00000514893 NBR1Q14596 966 aa12.23□□□□□ -0.45
NEDD4-211ENST00000514893 PDIA6Q15084 440 aa12.23□□□□□ -0.45
NEDD4-211ENST00000514893 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
NEDD4-211ENST00000514893 WBP1LQ9NX94 342 aa12.23□□□□□ -0.45
NEDD4-211ENST00000514893 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.23□□□□□ -0.45
NEDD4-211ENST00000514893 KCNC4Q03721 635 aa12.22□□□□□ -0.45
NEDD4-211ENST00000514893 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
NEDD4-211ENST00000514893 TSR3Q9UJK0 312 aaKnown RBP12.22□□□□□ -0.45
NEDD4-211ENST00000514893 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
NEDD4-211ENST00000514893 E2F4Q16254 413 aa12.2□□□□□ -0.46
NEDD4-211ENST00000514893 CERKQ8TCT0 537 aa12.19□□□□□ -0.46
NEDD4-211ENST00000514893 TSR1Q2NL82 804 aaKnown RBP12.17□□□□□ -0.46
NEDD4-211ENST00000514893 HPS5Q9UPZ3 1129 aa12.17□□□□□ -0.46
NEDD4-211ENST00000514893 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
NEDD4-211ENST00000514893 PPP4CP60510 307 aa12.16□□□□□ -0.46
NEDD4-211ENST00000514893 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
NEDD4-211ENST00000514893 PRSS12P56730 875 aa12.14□□□□□ -0.47
NEDD4-211ENST00000514893 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
NEDD4-211ENST00000514893 GRXCR2A6NFK2 248 aa12.12□□□□□ -0.47
NEDD4-211ENST00000514893 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
NEDD4-211ENST00000514893 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
NEDD4-211ENST00000514893 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
NEDD4-211ENST00000514893 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
NEDD4-211ENST00000514893 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
NEDD4-211ENST00000514893 TATDN2Q93075 761 aa12.07□□□□□ -0.48
NEDD4-211ENST00000514893 SAMD7Q7Z3H4 446 aa12.06□□□□□ -0.48
NEDD4-211ENST00000514893 SMAPO00193 183 aa12.05□□□□□ -0.48
NEDD4-211ENST00000514893 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
NEDD4-211ENST00000514893 OSBPP22059 807 aa12.04□□□□□ -0.48
NEDD4-211ENST00000514893 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
NEDD4-211ENST00000514893 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
NEDD4-211ENST00000514893 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
NEDD4-211ENST00000514893 LAPTM4AQ15012 233 aa12□□□□□ -0.49
NEDD4-211ENST00000514893 TJAP1Q5JTD0 557 aa12□□□□□ -0.49
NEDD4-211ENST00000514893 NUDT18Q6ZVK8 323 aa12□□□□□ -0.49
NEDD4-211ENST00000514893 NECTIN2Q92692 538 aa12□□□□□ -0.49
NEDD4-211ENST00000514893 Q6ZNB5 142 aa11.99□□□□□ -0.49
NEDD4-211ENST00000514893 IL21Q9HBE4 155 aa11.99□□□□□ -0.49
NEDD4-211ENST00000514893 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
NEDD4-211ENST00000514893 MTRQ99707 1265 aa11.95□□□□□ -0.5
NEDD4-211ENST00000514893 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
NEDD4-211ENST00000514893 RNF40O75150 1001 aa11.94□□□□□ -0.5
NEDD4-211ENST00000514893 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
NEDD4-211ENST00000514893 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
NEDD4-211ENST00000514893 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
NEDD4-211ENST00000514893 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
NEDD4-211ENST00000514893 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
NEDD4-211ENST00000514893 GFRA3O60609 400 aa11.9□□□□□ -0.5
NEDD4-211ENST00000514893 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
NEDD4-211ENST00000514893 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
NEDD4-211ENST00000514893 APLP1P51693 650 aa11.88□□□□□ -0.51
NEDD4-211ENST00000514893 PADI6Q6TGC4 694 aa11.88□□□□□ -0.51
NEDD4-211ENST00000514893 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
NEDD4-211ENST00000514893 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
NEDD4-211ENST00000514893 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
NEDD4-211ENST00000514893 ZNF516Q92618 1163 aa11.87□□□□□ -0.51
NEDD4-211ENST00000514893 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
NEDD4-211ENST00000514893 GGCXP38435 758 aa11.86□□□□□ -0.51
NEDD4-211ENST00000514893 PRR14Q9BWN1 585 aa11.85□□□□□ -0.51
NEDD4-211ENST00000514893 EYA1Q99502 592 aa11.84□□□□□ -0.51
NEDD4-211ENST00000514893 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
NEDD4-211ENST00000514893 NRG2O14511 850 aaPredicted RBP11.81□□□□□ -0.52
NEDD4-211ENST00000514893 COPS2P61201 443 aa11.8□□□□□ -0.52
NEDD4-211ENST00000514893 NKX2-3Q8TAU0 364 aa11.8□□□□□ -0.52
NEDD4-211ENST00000514893 TMUB1Q9BVT8 246 aa11.8□□□□□ -0.52
NEDD4-211ENST00000514893 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
NEDD4-211ENST00000514893 ZPR1O75312 459 aa11.77□□□□□ -0.53
NEDD4-211ENST00000514893 MLLT3P42568 568 aaPredicted RBP11.77□□□□□ -0.53
NEDD4-211ENST00000514893 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
NEDD4-211ENST00000514893 DNAJB2P25686 324 aa11.76□□□□□ -0.53
NEDD4-211ENST00000514893 PCDHB3Q9Y5E6 796 aa11.76□□□□□ -0.53
NEDD4-211ENST00000514893 PTGDRQ13258 359 aa11.75□□□□□ -0.53
NEDD4-211ENST00000514893 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms