RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 GOLGA6L22H0YM25 854 aa7.87□□□□□ -1.15
ATP2C1-222ENST00000514654 ERICH3Q5RHP9 1530 aa7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 APAF1O14727 1248 aa7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 AMPHP49418 695 aa7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 TSHZ2Q9NRE2 1034 aa7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 NPHP1O15259 732 aa7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 HSP90AB1P08238 724 aaKnown RBP7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 KCNJ4P48050 445 aa7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 TOP2BQ02880 1626 aa7.86□□□□□ -1.15
ATP2C1-222ENST00000514654 WASHC2AQ641Q2 1341 aa7.85□□□□□ -1.15
ATP2C1-222ENST00000514654 FYCO1Q9BQS8 1478 aa7.85□□□□□ -1.15
ATP2C1-222ENST00000514654 NBPF1Q3BBV0 1214 aa7.85□□□□□ -1.15
ATP2C1-222ENST00000514654 CENPJQ9HC77 1338 aaPredicted RBP7.85□□□□□ -1.15
ATP2C1-222ENST00000514654 BICRAQ9NZM4 1560 aa7.85□□□□□ -1.15
ATP2C1-222ENST00000514654 EVC2Q86UK5 1308 aa7.85□□□□□ -1.15
ATP2C1-222ENST00000514654 RRBP1Q9P2E9 1410 aaKnown RBP7.85□□□□□ -1.15
ATP2C1-222ENST00000514654 CFAP70Q5T0N1 1121 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 SLC4A10Q6U841 1118 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 CCDC7Q96M83 1385 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 MRC2Q9UBG0 1479 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 PDE3BQ13370 1112 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 NBPF8Q3BBV2 869 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 RWDD1Q9H446 243 aaPredicted RBP7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 HMGXB3Q12766 1538 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 CALD1Q05682 793 aaKnown RBP7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 ERICH6BQ5W0A0 696 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 EXOC6Q8TAG9 804 aa7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 NAP1L2Q9ULW6 460 aaPredicted RBP7.84□□□□□ -1.15
ATP2C1-222ENST00000514654 CGNL1Q0VF96 1302 aa7.83□□□□□ -1.16
ATP2C1-222ENST00000514654 FGD1P98174 961 aa7.83□□□□□ -1.16
ATP2C1-222ENST00000514654 SNAPC4Q5SXM2 1469 aa7.83□□□□□ -1.16
ATP2C1-222ENST00000514654 TCERG1O14776 1098 aaKnown RBP7.83□□□□□ -1.16
ATP2C1-222ENST00000514654 STK31Q9BXU1 1019 aa7.82□□□□□ -1.16
ATP2C1-222ENST00000514654 COG3Q96JB2 828 aa7.82□□□□□ -1.16
ATP2C1-222ENST00000514654 CABP2Q9NPB3 220 aa7.82□□□□□ -1.16
ATP2C1-222ENST00000514654 ZBED9Q6R2W3 1325 aa7.82□□□□□ -1.16
ATP2C1-222ENST00000514654 HSCBQ8IWL3 235 aa7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 SLKQ9H2G2 1235 aaPredicted RBP7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 IFT140Q96RY7 1462 aa7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 GGNBP2Q9H3C7 697 aa7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 ARHGAP5Q13017 1502 aa7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 TRIM44Q96DX7 344 aaPredicted RBP7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 SYNJ2O15056 1496 aa7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 CRBNQ96SW2 442 aa7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 RTN4Q9NQC3 1192 aaKnown RBP7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 COG6Q9Y2V7 657 aa7.81□□□□□ -1.16
ATP2C1-222ENST00000514654 RAPGEF3O95398 923 aa7.8□□□□□ -1.16
ATP2C1-222ENST00000514654 MFAP1P55081 439 aaKnown RBP7.8□□□□□ -1.16
ATP2C1-222ENST00000514654 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
ATP2C1-222ENST00000514654 PLCB2Q00722 1185 aa7.8□□□□□ -1.16
ATP2C1-222ENST00000514654 SCAPERQ9BY12 1400 aa7.79□□□□□ -1.16
ATP2C1-222ENST00000514654 PMFBP1Q8TBY8 1022 aa7.79□□□□□ -1.16
ATP2C1-222ENST00000514654 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
ATP2C1-222ENST00000514654 TROQ12816 1431 aaPredicted RBP7.79□□□□□ -1.16
ATP2C1-222ENST00000514654 CDK13Q14004 1512 aaKnown RBP7.79□□□□□ -1.16
ATP2C1-222ENST00000514654 C9orf84Q5VXU9 1444 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 E9PSI1 815 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 DIAPH1O60610 1272 aaKnown RBP7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 PTMAP06454 111 aaKnown RBP7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 HMOX1P09601 288 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 NUTM2GQ5VZR2 741 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 CHMP3Q9Y3E7 222 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 LMOD3Q0VAK6 560 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 DNMBPQ6XZF7 1577 aa7.78□□□□□ -1.16
ATP2C1-222ENST00000514654 RIPK4P57078 832 aa7.77□□□□□ -1.16
ATP2C1-222ENST00000514654 NECTIN2Q92692 538 aa7.77□□□□□ -1.16
ATP2C1-222ENST00000514654 TIAM1Q13009 1591 aa7.77□□□□□ -1.17
ATP2C1-222ENST00000514654 CDCA7LQ96GN5 454 aa7.77□□□□□ -1.17
ATP2C1-222ENST00000514654 EFCAB5A4FU69 1503 aa7.77□□□□□ -1.17
ATP2C1-222ENST00000514654 CNTLNQ9NXG0 1405 aa7.77□□□□□ -1.17
ATP2C1-222ENST00000514654 ZRSR1Q15695 479 aaKnown RBP7.77□□□□□ -1.17
ATP2C1-222ENST00000514654 CCDC184Q52MB2 194 aa7.77□□□□□ -1.17
ATP2C1-222ENST00000514654 HFM1A2PYH4 1435 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 TRIM6-TRIM34B2RNG4 842 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 SLC12A5Q9H2X9 1139 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 MCCP23508 829 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 MTHFSP49914 203 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 ABCA10Q8WWZ4 1543 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 SLC4A3P48751 1232 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 KIAA1211Q6ZU35 1233 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 FOXD4L1Q9NU39 408 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 ZKSCAN2Q63HK3 967 aa7.76□□□□□ -1.17
ATP2C1-222ENST00000514654 MIA2Q96PC5 1412 aa7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 TULP1O00294 542 aaPredicted RBP7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 KIAA1107Q9UPP5 1409 aa7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 EPRSP07814 1512 aaKnown RBP7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 EIF2S2P20042 333 aaKnown RBP7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 NOL8Q76FK4 1167 aaKnown RBP7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 NGEFQ8N5V2 710 aa7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 KIAA0586Q9BVV6 1533 aa7.75□□□□□ -1.17
ATP2C1-222ENST00000514654 PSME1Q06323 249 aa7.74□□□□□ -1.17
ATP2C1-222ENST00000514654 ANKRD45Q5TZF3 282 aa7.74□□□□□ -1.17
ATP2C1-222ENST00000514654 DAPK1P53355 1430 aa7.74□□□□□ -1.17
ATP2C1-222ENST00000514654 EHBP1L1Q8N3D4 1523 aa7.74□□□□□ -1.17
ATP2C1-222ENST00000514654 HMMRO75330 724 aa7.74□□□□□ -1.17
ATP2C1-222ENST00000514654 PDE4AP27815 886 aa7.74□□□□□ -1.17
ATP2C1-222ENST00000514654 PRAM1Q96QH2 718 aa7.74□□□□□ -1.17
ATP2C1-222ENST00000514654 PLB1Q6P1J6 1458 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms